MC08g1701 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1701
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	phytochrome A-associated F-box protein
Location	MC08: 24944853 .. 24945827 (+)
RNA-Seq Expression	MC08g1701
Synteny	MC08g1701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATCTGCCTTCTCCAACCTTCCCGAGGACGTTCTTCTCAACATTTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCGCGATTGGCCTGCGTTTCCACCAAATTCTCCTCCACCGTCCGAAATGTCTGCTGGAAGACCAAGTGCTCCACCGCCATCCCTTCCCTCCTCGCCGATCTTGTCGTCGGCGACTCTGTTCCCGCCGGCGGGTGGGCCTCGCTTCACAAGCTCGCCGTCTGCTGCCCGGGCCTCCTCCATTCCGGTGTTCTCCTCGAGAATTCCGATTTCGGCCTCGAGCGCGAGCTTGGGCCCGATGAAAATTATCTCGAATTGGCCCCCTCTCAGCACCCTAAACCGGACACGGACACTCAGTTCCAGGTCAATTCTGATTTCTCTGCTTCTGCGTCGTCTGATTGCGCCTGGTCTCTCTACGATGATTTGTATCTCGATACTGTGTATAACGATTCTGAGGCGCCCGATGTCCCCGATCCCCAAATCGGGGCCACGAAAGTGGAGAAGGGTGTTTTTATGGCGGACAGGGAATTCTCTGCTTCCAAGAGGAGGAAGATCTACAGGTCCATGAGGTCGCATTTGGCATCTGGTGTTTGGAATTTGAGCAGGGAGCAAGGGAACAAGCTTCTCCGTAGCCGATTCCGAGGCGATTGTTTGTACATTTGTGATTGGCCTGGATGCGTTCATATTGAAGAGAAGCGGAACTACATGCTTTTCAGAGGCATTTTCAAGAACTTCAAGGCGTCTCATGTTTGGAGAACGATAAAGGATGGTAACAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCCTGTCAGGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGGTACCATGATGATGGAGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACGGATCTGCCATTGTACACT

mRNA sequence

ATGGCGGAATCTGCCTTCTCCAACCTTCCCGAGGACGTTCTTCTCAACATTTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCGCGATTGGCCTGCGTTTCCACCAAATTCTCCTCCACCGTCCGAAATGTCTGCTGGAAGACCAAGTGCTCCACCGCCATCCCTTCCCTCCTCGCCGATCTTGTCGTCGGCGACTCTGTTCCCGCCGGCGGGTGGGCCTCGCTTCACAAGCTCGCCGTCTGCTGCCCGGGCCTCCTCCATTCCGGTGTTCTCCTCGAGAATTCCGATTTCGGCCTCGAGCGCGAGCTTGGGCCCGATGAAAATTATCTCGAATTGGCCCCCTCTCAGCACCCTAAACCGGACACGGACACTCAGTTCCAGGTCAATTCTGATTTCTCTGCTTCTGCGTCGTCTGATTGCGCCTGGTCTCTCTACGATGATTTGTATCTCGATACTGTGTATAACGATTCTGAGGCGCCCGATGTCCCCGATCCCCAAATCGGGGCCACGAAAGTGGAGAAGGGTGTTTTTATGGCGGACAGGGAATTCTCTGCTTCCAAGAGGAGGAAGATCTACAGGTCCATGAGGTCGCATTTGGCATCTGGTGTTTGGAATTTGAGCAGGGAGCAAGGGAACAAGCTTCTCCGTAGCCGATTCCGAGGCGATTGTTTGTACATTTGTGATTGGCCTGGATGCGTTCATATTGAAGAGAAGCGGAACTACATGCTTTTCAGAGGCATTTTCAAGAACTTCAAGGCGTCTCATGTTTGGAGAACGATAAAGGATGGTAACAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCCTGTCAGGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGGTACCATGATGATGGAGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACGGATCTGCCATTGTACACT

Coding sequence (CDS)

ATGGCGGAATCTGCCTTCTCCAACCTTCCCGAGGACGTTCTTCTCAACATTTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCGCGATTGGCCTGCGTTTCCACCAAATTCTCCTCCACCGTCCGAAATGTCTGCTGGAAGACCAAGTGCTCCACCGCCATCCCTTCCCTCCTCGCCGATCTTGTCGTCGGCGACTCTGTTCCCGCCGGCGGGTGGGCCTCGCTTCACAAGCTCGCCGTCTGCTGCCCGGGCCTCCTCCATTCCGGTGTTCTCCTCGAGAATTCCGATTTCGGCCTCGAGCGCGAGCTTGGGCCCGATGAAAATTATCTCGAATTGGCCCCCTCTCAGCACCCTAAACCGGACACGGACACTCAGTTCCAGGTCAATTCTGATTTCTCTGCTTCTGCGTCGTCTGATTGCGCCTGGTCTCTCTACGATGATTTGTATCTCGATACTGTGTATAACGATTCTGAGGCGCCCGATGTCCCCGATCCCCAAATCGGGGCCACGAAAGTGGAGAAGGGTGTTTTTATGGCGGACAGGGAATTCTCTGCTTCCAAGAGGAGGAAGATCTACAGGTCCATGAGGTCGCATTTGGCATCTGGTGTTTGGAATTTGAGCAGGGAGCAAGGGAACAAGCTTCTCCGTAGCCGATTCCGAGGCGATTGTTTGTACATTTGTGATTGGCCTGGATGCGTTCATATTGAAGAGAAGCGGAACTACATGCTTTTCAGAGGCATTTTCAAGAACTTCAAGGCGTCTCATGTTTGGAGAACGATAAAGGATGGTAACAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCCTGTCAGGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGGTACCATGATGATGGAGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACGGATCTGCCATTGTACACT

Protein sequence

MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

Homology

[Close]

BLAST of MC08g1701 vs. ExPASy Swiss-Prot
Match: Q8LEA8 (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2)

HSP 1 Score: 442.2 bits (1136), Expect = 5.1e-123
Identity = 217/346 (62.72%), Postives = 250/346 (72.25%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MAES FS +PEDV+ NIFFKL+DDPRNWARLACV TKFSS VRNVC KT+C +AIP++++
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 61  DLV--------------VGDS--VPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLEREL 120
           DL+                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 121 GPDENYLELAPSQHPKPDTD----TQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEA 180
           GPD+N         PKP T        +V+    +   +   WSLYDDLY DT+      
Sbjct: 121 GPDQNL-------DPKPTTTDLALNDEEVSKPVGSGLETTSFWSLYDDLYTDTIPAPPPE 180

Query: 181 PDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRF 240
             + D +    ++E       R+    KRRKI RS+ SHLASG WNLSREQGNKLL SRF
Sbjct: 181 DSIDDQE---EEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASRF 240

Query: 241 RGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKID-LNCAFCSCQ 300
           RGDCLYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC C 
Sbjct: 241 RGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCD 300

Query: 301 ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 326
           ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 301 ETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

[Close]

BLAST of MC08g1701 vs. ExPASy Swiss-Prot
Match: Q9LF38 (EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.3e-09
Identity = 78/327 (23.85%), Postives = 113/327 (34.56%), Query Frame = 0


Query: 8   NLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADL-VVGD 67
           +L EDVLL +F  L  +P+  A L+CV   F    + V WK  C T  P ++ DL   G 
Sbjct: 21  HLNEDVLLLVFQHLNWNPKLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSGS 80

Query: 68  SVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTDTQ 127
               G W +L KL + C G    G+                                ++ 
Sbjct: 81  HCIDGNWRALGKLLIYCSGCTQGGLF-------------------------------NSS 140

Query: 128 FQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSA 187
            Q+   F                                                     
Sbjct: 141 VQIPGHF----------------------------------------------------- 200

Query: 188 SKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIE--EKRNYML 247
                +YR+            SR  G  LL  + R D LY+CD   C H++  E+ +  L
Sbjct: 201 -----VYRT----------RFSRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGL 239

Query: 248 FRGIFKNFKASHVWRTI--KDGNRNKIDLNCAFCSCQETWDLHSA------FCLRRVFGY 307
           FRGIFK+F  S V + I  K    +  ++ C +C   + W +  A       C+ R+  Y
Sbjct: 261 FRGIFKSFPTSKVRKVIINKAVPFHPSEV-CPYCKA-KLWSMLQAKIIPQSACI-RLEAY 239

Query: 308 HDDGEPVVRAYVCENGHVSGAWTDLPL 324
            D     +  +VC NGH+ G  T  PL
Sbjct: 321 ED----CIEYFVCLNGHLLGICTLAPL 239

[Close]

BLAST of MC08g1701 vs. NCBI nr
Match: XP_022155270.1 (phytochrome A-associated F-box protein isoform X1 [Momordica charantia])

HSP 1 Score: 685 bits (1768), Expect = 1.80e-248
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA
Sbjct: 48  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 107

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK
Sbjct: 108 DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 167

Query: 121 PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA 180
           PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA
Sbjct: 168 PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA 227

Query: 181 DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR 240
           DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR
Sbjct: 228 DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR 287

Query: 241 NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG 300
           NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG
Sbjct: 288 NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG 347

Query: 301 EPVVRAYVCENGHVSGAWTDLPLYT 325
           EPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 348 EPVVRAYVCENGHVSGAWTDLPLYT 372

[Close]

BLAST of MC08g1701 vs. NCBI nr
Match: XP_022155271.1 (phytochrome A-associated F-box protein isoform X2 [Momordica charantia])

HSP 1 Score: 679 bits (1752), Expect = 4.93e-246
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA
Sbjct: 48  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 107

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK
Sbjct: 108 DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 167

Query: 121 PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA 180
           PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA
Sbjct: 168 PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA 227

Query: 181 DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR 240
           DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR
Sbjct: 228 DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR 287

Query: 241 NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG 300
           NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG
Sbjct: 288 NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG 347

Query: 301 EPVVRAYVCENGHVSGAWTDLP 322
           EPVVRAYVCENGHVSGAWTDLP
Sbjct: 348 EPVVRAYVCENGHVSGAWTDLP 369

[Close]

BLAST of MC08g1701 vs. NCBI nr
Match: XP_016901491.1 (PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 617 bits (1590), Expect = 5.67e-222
Identity = 292/333 (87.69%), Postives = 310/333 (93.09%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MA+S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQH +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PDTDTQ-----FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATK 180
           P++D       F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPG 240
           VEKGVFMADREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 325
           VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of MC08g1701 vs. NCBI nr
Match: KAA0044375.1 (phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 615 bits (1586), Expect = 2.31e-221
Identity = 292/333 (87.69%), Postives = 309/333 (92.79%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MA S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++
Sbjct: 1   MAGSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQH +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PDTDTQ-----FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATK 180
           P++D       F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPG 240
           VEKGVFMADREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 325
           VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of MC08g1701 vs. NCBI nr
Match: XP_038905727.1 (phytochrome A-associated F-box protein [Benincasa hispida])

HSP 1 Score: 608 bits (1568), Expect = 1.48e-218
Identity = 287/337 (85.16%), Postives = 307/337 (91.10%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MA+S FS LP+D+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL+A
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVA 60

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENY++L  S +P+
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLCSSHNPE 120

Query: 121 PDTDTQ---FQVNSDFSASAS---------SDCAWSLYDDLYLDTVYNDSEAPDVPDPQI 180
           P++D     F+VNSD SASAS         SDCAWSLYDDLYLDT+YNDSEAPDV DPQI
Sbjct: 121 PESDPSTALFEVNSDLSASASASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQI 180

Query: 181 GATKVEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYIC 240
           G TKVEKGVFM D++F  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYIC
Sbjct: 181 GVTKVEKGVFMTDKDFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYIC 240

Query: 241 DWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAF 300
           DWPGCVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNR KIDLNCAFCSC+ETWDLHSAF
Sbjct: 241 DWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRKKIDLNCAFCSCKETWDLHSAF 300

Query: 301 CLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 325
           CLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 CLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 337

[Close]

BLAST of MC08g1701 vs. ExPASy TrEMBL
Match: A0A6J1DLZ5 (phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022413 PE=4 SV=1)

HSP 1 Score: 685 bits (1768), Expect = 8.70e-249
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA
Sbjct: 48  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 107

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK
Sbjct: 108 DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 167

Query: 121 PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA 180
           PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA
Sbjct: 168 PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA 227

Query: 181 DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR 240
           DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR
Sbjct: 228 DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR 287

Query: 241 NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG 300
           NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG
Sbjct: 288 NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG 347

Query: 301 EPVVRAYVCENGHVSGAWTDLPLYT 325
           EPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 348 EPVVRAYVCENGHVSGAWTDLPLYT 372

[Close]

BLAST of MC08g1701 vs. ExPASy TrEMBL
Match: A0A6J1DR82 (phytochrome A-associated F-box protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022413 PE=4 SV=1)

HSP 1 Score: 679 bits (1752), Expect = 2.39e-246
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA
Sbjct: 48  MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 107

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK
Sbjct: 108 DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 167

Query: 121 PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA 180
           PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA
Sbjct: 168 PDTDTQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMA 227

Query: 181 DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR 240
           DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR
Sbjct: 228 DREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKR 287

Query: 241 NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG 300
           NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG
Sbjct: 288 NYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDG 347

Query: 301 EPVVRAYVCENGHVSGAWTDLP 322
           EPVVRAYVCENGHVSGAWTDLP
Sbjct: 348 EPVVRAYVCENGHVSGAWTDLP 369

[Close]

BLAST of MC08g1701 vs. ExPASy TrEMBL
Match: A0A5D3E0Q4 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001020 PE=4 SV=1)

HSP 1 Score: 617 bits (1590), Expect = 2.74e-222
Identity = 292/333 (87.69%), Postives = 310/333 (93.09%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MA+S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQH +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PDTDTQ-----FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATK 180
           P++D       F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPG 240
           VEKGVFMADREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 325
           VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of MC08g1701 vs. ExPASy TrEMBL
Match: A0A1S4DZU2 (phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 PE=4 SV=1)

HSP 1 Score: 617 bits (1590), Expect = 2.74e-222
Identity = 292/333 (87.69%), Postives = 310/333 (93.09%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MA+S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQH +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PDTDTQ-----FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATK 180
           P++D       F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPG 240
           VEKGVFMADREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 325
           VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of MC08g1701 vs. ExPASy TrEMBL
Match: A0A5A7TSM0 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001020 PE=4 SV=1)

HSP 1 Score: 615 bits (1586), Expect = 1.12e-221
Identity = 292/333 (87.69%), Postives = 309/333 (92.79%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MA S FS LPED+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS AIPSL++
Sbjct: 1   MAGSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLVVGDSVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPK 120
           DL+VGDS+PAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQH +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 PDTDTQ-----FQVNSDFSASAS---SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATK 180
           P++D       F+VNSD SASAS   SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPG 240
           VEKGVFMADREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRR 300
           CVHIEEKRNYMLFRGIFKNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 325
           VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of MC08g1701 vs. TAIR 10
Match: AT4G02440.1 (F-box family protein )

HSP 1 Score: 442.2 bits (1136), Expect = 3.6e-124
Identity = 217/346 (62.72%), Postives = 250/346 (72.25%), Query Frame = 0


Query: 1   MAESAFSNLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLA 60
           MAES FS +PEDV+ NIFFKL+DDPRNWARLACV TKFSS VRNVC KT+C +AIP++++
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 61  DLV--------------VGDS--VPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLEREL 120
           DL+                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 121 GPDENYLELAPSQHPKPDTD----TQFQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEA 180
           GPD+N         PKP T        +V+    +   +   WSLYDDLY DT+      
Sbjct: 121 GPDQNL-------DPKPTTTDLALNDEEVSKPVGSGLETTSFWSLYDDLYTDTIPAPPPE 180

Query: 181 PDVPDPQIGATKVEKGVFMADREFSASKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRF 240
             + D +    ++E       R+    KRRKI RS+ SHLASG WNLSREQGNKLL SRF
Sbjct: 181 DSIDDQE---EEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASRF 240

Query: 241 RGDCLYICDWPGCVHIEEKRNYMLFRGIFKNFKASHVWRTIKDGNRNKID-LNCAFCSCQ 300
           RGDCLYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC C 
Sbjct: 241 RGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCD 300

Query: 301 ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 326
           ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 301 ETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

[Close]

BLAST of MC08g1701 vs. TAIR 10
Match: AT5G15440.1 (EID1-like 1 )

HSP 1 Score: 65.5 bits (158), Expect = 9.2e-11
Identity = 78/327 (23.85%), Postives = 113/327 (34.56%), Query Frame = 0


Query: 8   NLPEDVLLNIFFKLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADL-VVGD 67
           +L EDVLL +F  L  +P+  A L+CV   F    + V WK  C T  P ++ DL   G 
Sbjct: 21  HLNEDVLLLVFQHLNWNPKLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSGS 80

Query: 68  SVPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTDTQ 127
               G W +L KL + C G    G+                                ++ 
Sbjct: 81  HCIDGNWRALGKLLIYCSGCTQGGLF-------------------------------NSS 140

Query: 128 FQVNSDFSASASSDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSA 187
            Q+   F                                                     
Sbjct: 141 VQIPGHF----------------------------------------------------- 200

Query: 188 SKRRKIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIE--EKRNYML 247
                +YR+            SR  G  LL  + R D LY+CD   C H++  E+ +  L
Sbjct: 201 -----VYRT----------RFSRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGL 239

Query: 248 FRGIFKNFKASHVWRTI--KDGNRNKIDLNCAFCSCQETWDLHSA------FCLRRVFGY 307
           FRGIFK+F  S V + I  K    +  ++ C +C   + W +  A       C+ R+  Y
Sbjct: 261 FRGIFKSFPTSKVRKVIINKAVPFHPSEV-CPYCKA-KLWSMLQAKIIPQSACI-RLEAY 239

Query: 308 HDDGEPVVRAYVCENGHVSGAWTDLPL 324
            D     +  +VC NGH+ G  T  PL
Sbjct: 321 ED----CIEYFVCLNGHLLGICTLAPL 239

The following BLAST results are available for this feature:

BLAST of MC08g1701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEA8	5.1e-123	62.72	Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 P...	[more]
Q9LF38	1.3e-09	23.85	EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1	[more]

BLAST of MC08g1701 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155270.1	1.80e-248	100.00	phytochrome A-associated F-box protein isoform X1 [Momordica charantia]	[more]
XP_022155271.1	4.93e-246	100.00	phytochrome A-associated F-box protein isoform X2 [Momordica charantia]	[more]
XP_016901491.1	5.67e-222	87.69	PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phy...	[more]
KAA0044375.1	2.31e-221	87.69	phytochrome A-associated F-box protein [Cucumis melo var. makuwa]	[more]
XP_038905727.1	1.48e-218	85.16	phytochrome A-associated F-box protein [Benincasa hispida]	[more]

BLAST of MC08g1701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLZ5	8.70e-249	100.00	phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673...	[more]
A0A6J1DR82	2.39e-246	100.00	phytochrome A-associated F-box protein isoform X2 OS=Momordica charantia OX=3673...	[more]
A0A5D3E0Q4	2.74e-222	87.69	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DZU2	2.74e-222	87.69	phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 P...	[more]
A0A5A7TSM0	1.12e-221	87.69	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of MC08g1701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02440.1	3.6e-124	62.72	F-box family protein	[more]
AT5G15440.1	9.2e-11	23.85	EID1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 6..50 e-value: 2.2E-5 score: 24.2
None	No IPR available	PANTHER	PTHR31348:SF4	PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN	coord: 3..325
IPR040267	F-box protein EID1-like	PANTHER	PTHR31348	EID1-LIKE F-BOX PROTEIN 2-RELATED	coord: 3..325
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 4..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1701.1	MC08g1701.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048366	leaf development
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0010099	regulation of photomorphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding