MC08g1698 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1698
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 24915802 .. 24916008 (-)
RNA-Seq Expression	MC08g1698
Synteny	MC08g1698

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTACAACGGTGATCCGATTGCCATACCCGTCGTCGATTGCACACCAAGCAGTGGTCCACACTCTGAACCACCTCAAATTAAATCGAATCGTCACAATAACTATCAAGATTTGATGTTGTCGATGGCAGAGATAGTACCATTTCGAATACAACATGGTTTCGAAATTCAAGGAGATCGCGAATTTTGTAGAGAAAAACAAGGATTCT

mRNA sequence

AGTACAACGGTGATCCGATTGCCATACCCGTCGTCGATTGCACACCAAGCAGTGGTCCACACTCTGAACCACCTCAAATTAAATCGAATCGTCACAATAACTGATTTGATGTTGTCGATGGCAGAGATATACCATTTCGAATACAACATGGTTTCGAAATTCAAGGAGATCGCGAATTTTGTAGAGAAAAACAAGGATTCT

Coding sequence (CDS)

AGTACAACGGTGATCCGATTGCCATACCCGTCGTCGATTGCACACCAAGCAGTGGTCCACACTCTGAACCACCTCAAATTAAATCGAATCGTCACAATAACTGATTTGATGTTGTCGATGGCAGAGATATACCATTTCGAATACAACATGGTTTCGAAATTCAAGGAGATCGCGAATTTTGTAGAGAAAAACAAGGATTCT

Protein sequence

STTVIRLPYPSSIAHQAVVHTLNHLKLNRIVTITDLMLSMAEIYHFEYNMVSKFKEIANFVEKNKDS

Homology

[Close]

BLAST of MC08g1698 vs. NCBI nr
Match: XP_022135937.1 (uncharacterized protein LOC111007768 [Momordica charantia])

HSP 1 Score: 60.8 bits (146), Expect = 7.36e-09
Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 3   TVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAEI-YHFEYNMVSKFKEIANF 62
           T I+ PYP S  HQAVVH LN+L+ N+I+TIT D+     E  Y  EY++++KF+EIA+F
Sbjct: 120 TPIKPPYPWSTEHQAVVHDLNYLRENQILTITGDVRCDRCEKQYTIEYDLMTKFEEIASF 179

Query: 63  VEKNK 65
           +EKNK
Sbjct: 180 IEKNK 184

[Close]

BLAST of MC08g1698 vs. NCBI nr
Match: XP_022135938.1 (probable serine/threonine-protein kinase samkC [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 1.28e-08
Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 3   TVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAEI-YHFEYNMVSKFKEIANF 62
           T I  PYP S A++AVVH L +L+ N+I+TIT D+  S  +  Y  EY++V+KF EIA+F
Sbjct: 189 TAIEPPYPWSTANRAVVHDLKYLQQNQILTITGDVKCSQCQKQYKIEYDLVTKFDEIASF 248

Query: 63  VEKNKDS 67
           +EKNKD+
Sbjct: 249 IEKNKDT 255

[Close]

BLAST of MC08g1698 vs. NCBI nr
Match: XP_022972401.1 (uncharacterized protein LOC111470968 [Cucurbita maxima])

HSP 1 Score: 57.0 bits (136), Expect = 1.17e-07
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 1   STTVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAE-IYHFEYNMVSKFKEIA 60
           +T  I  PYP S    AVVHTL++L LN+I+TIT D+       IY  EYN+VSKF EI 
Sbjct: 53  TTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIG 112

Query: 61  NFVEKNKDS 67
           +FVE N +S
Sbjct: 113 SFVEHNMES 121

[Close]

BLAST of MC08g1698 vs. NCBI nr
Match: XP_011659748.1 (uncharacterized protein LOC105436256 [Cucumis sativus] >KGN44335.1 hypothetical protein Csa_015666 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 7.20e-07
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 1   STTVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAEI-YHFEYNMVSKFKEIA 60
           +T  I  PYP S   +A+V TLN LK N+I+ IT D+     ++ Y  EY+M SKF+EIA
Sbjct: 72  TTETIEPPYPWSTNRRAMVRTLNDLKSNQILQITGDVQCRQCQVEYTIEYDMDSKFEEIA 131

Query: 61  NFVEKNKDS 67
           +FVE+NK+S
Sbjct: 132 SFVEENKNS 140

[Close]

BLAST of MC08g1698 vs. NCBI nr
Match: KAG6572025.1 (hypothetical protein SDJN03_28753, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 54.7 bits (130), Expect = 1.39e-06
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 2   TTVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAE-IYHFEYNMVSKFKEIAN 61
           T  I  PYP S   +AVVHTLN++  N+I+TIT D+     + IY  EY++VSKF EI +
Sbjct: 60  TGPIEPPYPWSTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYKIEYDIVSKFNEIGS 119

Query: 62  FVEKNKDS 67
           FVE N +S
Sbjct: 120 FVENNMES 127

[Close]

BLAST of MC08g1698 vs. ExPASy TrEMBL
Match: A0A6J1C462 (uncharacterized protein LOC111007768 OS=Momordica charantia OX=3673 GN=LOC111007768 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.56e-09
Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 3   TVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAEI-YHFEYNMVSKFKEIANF 62
           T I+ PYP S  HQAVVH LN+L+ N+I+TIT D+     E  Y  EY++++KF+EIA+F
Sbjct: 120 TPIKPPYPWSTEHQAVVHDLNYLRENQILTITGDVRCDRCEKQYTIEYDLMTKFEEIASF 179

Query: 63  VEKNK 65
           +EKNK
Sbjct: 180 IEKNK 184

[Close]

BLAST of MC08g1698 vs. ExPASy TrEMBL
Match: A0A6J1C690 (probable serine/threonine-protein kinase samkC OS=Momordica charantia OX=3673 GN=LOC111007769 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.17e-09
Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 3   TVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAEI-YHFEYNMVSKFKEIANF 62
           T I  PYP S A++AVVH L +L+ N+I+TIT D+  S  +  Y  EY++V+KF EIA+F
Sbjct: 189 TAIEPPYPWSTANRAVVHDLKYLQQNQILTITGDVKCSQCQKQYKIEYDLVTKFDEIASF 248

Query: 63  VEKNKDS 67
           +EKNKD+
Sbjct: 249 IEKNKDT 255

[Close]

BLAST of MC08g1698 vs. ExPASy TrEMBL
Match: A0A6J1I5V9 (uncharacterized protein LOC111470968 OS=Cucurbita maxima OX=3661 GN=LOC111470968 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.69e-08
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 1   STTVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAE-IYHFEYNMVSKFKEIA 60
           +T  I  PYP S    AVVHTL++L LN+I+TIT D+       IY  EYN+VSKF EI 
Sbjct: 53  TTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIG 112

Query: 61  NFVEKNKDS 67
           +FVE N +S
Sbjct: 113 SFVEHNMES 121

[Close]

BLAST of MC08g1698 vs. ExPASy TrEMBL
Match: A0A0A0K3Q8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259350 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.48e-07
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 1   STTVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAEI-YHFEYNMVSKFKEIA 60
           +T  I  PYP S   +A+V TLN LK N+I+ IT D+     ++ Y  EY+M SKF+EIA
Sbjct: 72  TTETIEPPYPWSTNRRAMVRTLNDLKSNQILQITGDVQCRQCQVEYTIEYDMDSKFEEIA 131

Query: 61  NFVEKNKDS 67
           +FVE+NK+S
Sbjct: 132 SFVEENKNS 140

[Close]

BLAST of MC08g1698 vs. ExPASy TrEMBL
Match: A0A1S3BHR1 (uncharacterized protein LOC103489770 OS=Cucumis melo OX=3656 GN=LOC103489770 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.71e-06
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 1   STTVIRLPYPSSIAHQAVVHTLNHLKLNRIVTIT-DLMLSMAEI-YHFEYNMVSKFKEIA 60
           +T  I  PYP S   +A+V TLN L+ ++I+ IT D+     +I Y  EY+MVSKF+EIA
Sbjct: 66  TTETIEPPYPWSTNRRAMVRTLNDLRSSQILQITGDVRCRQCQIEYTIEYDMVSKFEEIA 125

Query: 61  NFVEKNKD 66
           +FVE+NK+
Sbjct: 126 SFVEENKN 133

The following BLAST results are available for this feature:

BLAST of MC08g1698 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135937.1	7.36e-09	53.85	uncharacterized protein LOC111007768 [Momordica charantia]	[more]
XP_022135938.1	1.28e-08	52.24	probable serine/threonine-protein kinase samkC [Momordica charantia]	[more]
XP_022972401.1	1.17e-07	52.17	uncharacterized protein LOC111470968 [Cucurbita maxima]	[more]
XP_011659748.1	7.20e-07	49.28	uncharacterized protein LOC105436256 [Cucumis sativus] >KGN44335.1 hypothetical ...	[more]
KAG6572025.1	1.39e-06	50.00	hypothetical protein SDJN03_28753, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC08g1698 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C462	3.56e-09	53.85	uncharacterized protein LOC111007768 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1C690	6.17e-09	52.24	probable serine/threonine-protein kinase samkC OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1I5V9	5.69e-08	52.17	uncharacterized protein LOC111470968 OS=Cucurbita maxima OX=3661 GN=LOC111470968...	[more]
A0A0A0K3Q8	3.48e-07	49.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259350 PE=4 SV=1	[more]
A0A1S3BHR1	1.71e-06	48.53	uncharacterized protein LOC103489770 OS=Cucumis melo OX=3656 GN=LOC103489770 PE=...	[more]

BLAST of MC08g1698 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1698.1	MC08g1698.1	mRNA