MC08g1660 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1660
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	rRNA adenine N(6)-methyltransferase
Location	MC08: 24548959 .. 24549249 (-)
RNA-Seq Expression	MC08g1660
Synteny	MC08g1660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCAGATACAATGGATGCTGAAGCTCAAGACGATATTTCTCCGAGGCCTCGGGTTAAAGCCTCATTTTACCTAGGGTCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACTCTCTCAGAGCAGTTGGTTTCTATGAAAGAGGAGAGCATGGCTATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAACTATGTGCCGGACGAACTAGCTGAAGAAGTTTCCGAGGACGACGACGAGATCCCCAAAAAGCCTCAAGTGAAGTCAAAGAAGTCTAAATTAACA

mRNA sequence

CTTTCAGATACAATGGATGCTGAAGCTCAAGACGATATTTCTCCGAGGCCTCGGGTTAAAGCCTCATTTTACCTAGGGTCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACTCTCTCAGAGCAGTTGGTTTCTATGAAAGAGGAGAGCATGGCTATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAACTATGTGCCGGACGAACTAGCTGAAGAAGTTTCCGAGGACGACGACGAGATCCCCAAAAAGCCTCAAGTGAAGTCAAAGAAGTCTAAATTAACA

Coding sequence (CDS)

CTTTCAGATACAATGGATGCTGAAGCTCAAGACGATATTTCTCCGAGGCCTCGGGTTAAAGCCTCATTTTACCTAGGGTCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACTCTCTCAGAGCAGTTGGTTTCTATGAAAGAGGAGAGCATGGCTATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAACTATGTGCCGGACGAACTAGCTGAAGAAGTTTCCGAGGACGACGACGAGATCCCCAAAAAGCCTCAAGTGAAGTCAAAGAAGTCTAAATTAACA

Protein sequence

LSDTMDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNVPNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT

Homology

[Close]

BLAST of MC08g1660 vs. NCBI nr
Match: XP_008443784.1 (PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo])

HSP 1 Score: 149 bits (375), Expect = 2.39e-44
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  LSDTMDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYIT 60
          L D+MDA A++DI  RPRVK SF LGSE HLVNTANKGTLSEQL+SMKE+SMAILKEYIT
Sbjct: 3  LPDSMDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYIT 62

Query: 61 KHNVPNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT 97
          KHNVPN VPDEL EE SEDDDEI +KPQVK+KK+K+T
Sbjct: 63 KHNVPNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 99

[Close]

BLAST of MC08g1660 vs. NCBI nr
Match: KAA0035148.1 (uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (375), Expect = 3.45e-44
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   LSDTMDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYIT 60
           L D+MDA A++DI  RPRVK SF LGSE HLVNTANKGTLSEQL+SMKE+SMAILKEYIT
Sbjct: 15  LPDSMDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYIT 74

Query: 61  KHNVPNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT 97
           KHNVPN VPDEL EE SEDDDEI +KPQVK+KK+K+T
Sbjct: 75  KHNVPNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 111

[Close]

BLAST of MC08g1660 vs. NCBI nr
Match: TYK29223.1 (uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (365), Expect = 6.66e-43
Identity = 75/93 (80.65%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 5  MDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNV 64
          MDA A++DI  RPRVK SF LGSE HLVNTANKGTLSEQL+SMKE+SMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 60

Query: 65 PNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT 97
          PN VPDEL EE SEDDDEI +KPQVK+KK+K+T
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]

BLAST of MC08g1660 vs. NCBI nr
Match: XP_011660264.1 (uncharacterized protein LOC105436354 [Cucumis sativus] >XP_031736764.1 uncharacterized protein LOC105436354 [Cucumis sativus] >KGN66757.1 hypothetical protein Csa_007293 [Cucumis sativus])

HSP 1 Score: 144 bits (362), Expect = 1.91e-42
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 5  MDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNV 64
          MDA A++DI  RPRVK S  LGSETHLVNTANKGTLSEQL SMKE+SMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60

Query: 65 PNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT 97
          PN VPDEL EE SEDDDEI +KPQVK+KK+K+T
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]

BLAST of MC08g1660 vs. NCBI nr
Match: XP_022948365.1 (uncharacterized protein LOC111452065 [Cucurbita moschata])

HSP 1 Score: 142 bits (357), Expect = 1.14e-41
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 5  MDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNV 64
          MDA+AQ+ IS  PRVKASF LGSE HLVNTANKGTLSEQL+SMKEESMAILKEYITKHNV
Sbjct: 1  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNV 60

Query: 65 PNYVPDELAEEVSEDDD-EIPKKPQVKSKKSKLT 97
          PN VPDEL EE SEDDD E  +KPQVKSKK+KLT
Sbjct: 61 PNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT 94

[Close]

BLAST of MC08g1660 vs. ExPASy TrEMBL
Match: A0A1S3B8U1 (uncharacterized protein LOC103487289 OS=Cucumis melo OX=3656 GN=LOC103487289 PE=4 SV=1)

HSP 1 Score: 149 bits (375), Expect = 1.15e-44
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  LSDTMDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYIT 60
          L D+MDA A++DI  RPRVK SF LGSE HLVNTANKGTLSEQL+SMKE+SMAILKEYIT
Sbjct: 3  LPDSMDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYIT 62

Query: 61 KHNVPNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT 97
          KHNVPN VPDEL EE SEDDDEI +KPQVK+KK+K+T
Sbjct: 63 KHNVPNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 99

[Close]

BLAST of MC08g1660 vs. ExPASy TrEMBL
Match: A0A5A7SX16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002390 PE=4 SV=1)

HSP 1 Score: 149 bits (375), Expect = 1.67e-44
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   LSDTMDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYIT 60
           L D+MDA A++DI  RPRVK SF LGSE HLVNTANKGTLSEQL+SMKE+SMAILKEYIT
Sbjct: 15  LPDSMDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYIT 74

Query: 61  KHNVPNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT 97
           KHNVPN VPDEL EE SEDDDEI +KPQVK+KK+K+T
Sbjct: 75  KHNVPNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 111

[Close]

BLAST of MC08g1660 vs. ExPASy TrEMBL
Match: A0A5D3DZN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00090 PE=4 SV=1)

HSP 1 Score: 145 bits (365), Expect = 3.22e-43
Identity = 75/93 (80.65%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 5  MDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNV 64
          MDA A++DI  RPRVK SF LGSE HLVNTANKGTLSEQL+SMKE+SMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 60

Query: 65 PNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT 97
          PN VPDEL EE SEDDDEI +KPQVK+KK+K+T
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]

BLAST of MC08g1660 vs. ExPASy TrEMBL
Match: A0A0A0M0V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G679550 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 9.24e-43
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 5  MDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNV 64
          MDA A++DI  RPRVK S  LGSETHLVNTANKGTLSEQL SMKE+SMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60

Query: 65 PNYVPDELAEEVSEDDDEIPKKPQVKSKKSKLT 97
          PN VPDEL EE SEDDDEI +KPQVK+KK+K+T
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]

BLAST of MC08g1660 vs. ExPASy TrEMBL
Match: A0A6J1G9M3 (uncharacterized protein LOC111452065 OS=Cucurbita moschata OX=3662 GN=LOC111452065 PE=4 SV=1)

HSP 1 Score: 142 bits (357), Expect = 5.51e-42
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 5  MDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNV 64
          MDA+AQ+ IS  PRVKASF LGSE HLVNTANKGTLSEQL+SMKEESMAILKEYITKHNV
Sbjct: 1  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNV 60

Query: 65 PNYVPDELAEEVSEDDD-EIPKKPQVKSKKSKLT 97
          PN VPDEL EE SEDDD E  +KPQVKSKK+KLT
Sbjct: 61 PNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT 94

[Close]

BLAST of MC08g1660 vs. TAIR 10
Match: AT1G47820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47813.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.2e-12
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 5  MDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNV 64
          M+ E+   +  +  VK  F LG+E++ +++    T+ +QLVSMKEESM ILK++ITKHNV
Sbjct: 1  MEIESHVSVPGKNLVKVEFKLGTESYTIDSIKGDTVLDQLVSMKEESMKILKDFITKHNV 60

Query: 65 P-NYVPDELAEEVSEDDDE------IPKKPQVKSK 93
          P + VPD++  +  E DD+       P KP  K+K
Sbjct: 61 PDDDVPDQILSDDEEGDDDDASPVICPVKPPKKTK 95

[Close]

BLAST of MC08g1660 vs. TAIR 10
Match: AT1G47820.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47813.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.2e-12
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 5  MDAEAQDDISPRPRVKASFYLGSETHLVNTANKGTLSEQLVSMKEESMAILKEYITKHNV 64
          M+ E+   +  +  VK  F LG+E++ +++    T+ +QLVSMKEESM ILK++ITKHNV
Sbjct: 1  MEIESHVSVPGKNLVKVEFKLGTESYTIDSIKGDTVLDQLVSMKEESMKILKDFITKHNV 60

Query: 65 P-NYVPDELAEEVSEDDDE------IPKKPQVKSK 93
          P + VPD++  +  E DD+       P KP  K+K
Sbjct: 61 PDDDVPDQILSDDEEGDDDDASPVICPVKPPKKTK 95

The following BLAST results are available for this feature:

BLAST of MC08g1660 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443784.1	2.39e-44	79.38	PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo]	[more]
KAA0035148.1	3.45e-44	79.38	uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa]	[more]
TYK29223.1	6.66e-43	80.65	uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa]	[more]
XP_011660264.1	1.91e-42	80.65	uncharacterized protein LOC105436354 [Cucumis sativus] >XP_031736764.1 uncharact...	[more]
XP_022948365.1	1.14e-41	82.98	uncharacterized protein LOC111452065 [Cucurbita moschata]	[more]

BLAST of MC08g1660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8U1	1.15e-44	79.38	uncharacterized protein LOC103487289 OS=Cucumis melo OX=3656 GN=LOC103487289 PE=...	[more]
A0A5A7SX16	1.67e-44	79.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DZN8	3.22e-43	80.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0M0V3	9.24e-43	80.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G679550 PE=4 SV=1	[more]
A0A6J1G9M3	5.51e-42	82.98	uncharacterized protein LOC111452065 OS=Cucurbita moschata OX=3662 GN=LOC1114520...	[more]

BLAST of MC08g1660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47820.1	7.2e-12	42.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G47820.2	7.2e-12	42.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..97
None	No IPR available	PANTHER	PTHR37194	T2E6.7-RELATED	coord: 5..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1660.1	MC08g1660.1	mRNA