MC08g1644 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1644
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related
Location	MC08: 24414183 .. 24414308 (+)
RNA-Seq Expression	MC08g1644
Synteny	MC08g1644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTTCATTATCAATCTCACCGCCCTTTTATACTCAGCGTCCGCTCCTG

mRNA sequence

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTTCATTATCAATCTCACCGCCCTTTTATACTCAGCGTCCGCTCCTG

Coding sequence (CDS)

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTTCATTATCAATCTCACCGCCCTTTTATACTCAGCGTCCGCTCCTG

Protein sequence

MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFYTQRPLL

Homology

[Close]

BLAST of MC08g1644 vs. ExPASy Swiss-Prot
Match: F4J3H7 (Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-07
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGML 28
          MAH+SDIKLIRTDTTLDLSQKAEKGM+
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMI 27

[Close]

BLAST of MC08g1644 vs. NCBI nr
Match: PHT36948.1 (hypothetical protein CQW23_24648 [Capsicum baccatum])

HSP 1 Score: 62.0 bits (149), Expect = 5.67e-11
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFY 36
          MAH+SDIKLIRTDTTLDLSQKAEKGML L   P FY
Sbjct: 44 MAHISDIKLIRTDTTLDLSQKAEKGMLMLGNGPSFY 79

[Close]

BLAST of MC08g1644 vs. NCBI nr
Match: TYI02528.1 (hypothetical protein ES332_A11G273000v1 [Gossypium tomentosum])

HSP 1 Score: 61.2 bits (147), Expect = 7.90e-11
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFYTQRP 40
          MAHVSDIKLIRTDTTLDLSQKAEKGM  LS +  FY + P
Sbjct: 29 MAHVSDIKLIRTDTTLDLSQKAEKGMFVLSQARSFYKKSP 68

[Close]

BLAST of MC08g1644 vs. NCBI nr
Match: CBI33935.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 60.1 bits (144), Expect = 1.01e-10
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFY 36
          M+HVSDIKLIRTDTTLDLSQKAEKGML L    PFY
Sbjct: 1  MSHVSDIKLIRTDTTLDLSQKAEKGMLFLVSPSPFY 36

[Close]

BLAST of MC08g1644 vs. NCBI nr
Match: CBI33929.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 60.1 bits (144), Expect = 1.13e-10
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFY 36
          M+HVSDIKLIRTDTTLDLSQKAEKGM   + S PFY
Sbjct: 1  MSHVSDIKLIRTDTTLDLSQKAEKGMFCNAFSTPFY 36

[Close]

BLAST of MC08g1644 vs. NCBI nr
Match: CDO98762.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 59.7 bits (143), Expect = 1.72e-10
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFYT 37
          MAHVSDIKLIRTDTTLDLSQKAEKGML   ++  FYT
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLVTRLARCFYT 37

[Close]

BLAST of MC08g1644 vs. ExPASy TrEMBL
Match: F6HTC0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00820 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.76e-11
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFYTQR 39
          M+HVSDIKLIRTDTTLDLSQKAEKGML    S PFY+ +
Sbjct: 1  MSHVSDIKLIRTDTTLDLSQKAEKGMLCNGFSTPFYSMQ 39

[Close]

BLAST of MC08g1644 vs. ExPASy TrEMBL
Match: A0A2G2VVD6 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_24648 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.74e-11
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFY 36
          MAH+SDIKLIRTDTTLDLSQKAEKGML L   P FY
Sbjct: 44 MAHISDIKLIRTDTTLDLSQKAEKGMLMLGNGPSFY 79

[Close]

BLAST of MC08g1644 vs. ExPASy TrEMBL
Match: A0A5D2NEN1 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G273000v1 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.83e-11
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFYTQRP 40
          MAHVSDIKLIRTDTTLDLSQKAEKGM  LS +  FY + P
Sbjct: 29 MAHVSDIKLIRTDTTLDLSQKAEKGMFVLSQARSFYKKSP 68

[Close]

BLAST of MC08g1644 vs. ExPASy TrEMBL
Match: D7TTF6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00720 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.90e-11
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFY 36
          M+HVSDIKLIRTDTTLDLSQKAEKGML L    PFY
Sbjct: 1  MSHVSDIKLIRTDTTLDLSQKAEKGMLFLVSPSPFY 36

[Close]

BLAST of MC08g1644 vs. ExPASy TrEMBL
Match: D7TU14 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00780 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.47e-11
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLSLSISPPFY 36
          M+HVSDIKLIRTDTTLDLSQKAEKGM   + S PFY
Sbjct: 1  MSHVSDIKLIRTDTTLDLSQKAEKGMFCNAFSTPFY 36

[Close]

BLAST of MC08g1644 vs. TAIR 10
Match: AT3G57770.1 (Protein kinase superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-08
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGML 28
          MAH+SDIKLIRTDTTLDLSQKAEKGM+
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMI 27

[Close]

BLAST of MC08g1644 vs. TAIR 10
Match: AT1G16820.1 (vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related )

HSP 1 Score: 53.1 bits (126), Expect = 6.1e-08
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 27
          MAH+SDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGM 26

The following BLAST results are available for this feature:

BLAST of MC08g1644 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J3H7	5.0e-07	92.59	Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=...	[more]

BLAST of MC08g1644 vs. NCBI nr


Match Name	E-value	Identity	Description
PHT36948.1	5.67e-11	83.33	hypothetical protein CQW23_24648 [Capsicum baccatum]	[more]
TYI02528.1	7.90e-11	77.50	hypothetical protein ES332_A11G273000v1 [Gossypium tomentosum]	[more]
CBI33935.3	1.01e-10	83.33	unnamed protein product, partial [Vitis vinifera]	[more]
CBI33929.3	1.13e-10	80.56	unnamed protein product, partial [Vitis vinifera]	[more]
CDO98762.1	1.72e-10	81.08	unnamed protein product [Coffea canephora]	[more]

BLAST of MC08g1644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
F6HTC0	1.76e-11	76.92	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00820 PE=4 SV=...	[more]
A0A2G2VVD6	2.74e-11	83.33	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_24648 PE=4 SV=1	[more]
A0A5D2NEN1	3.83e-11	77.50	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G273000v1 P...	[more]
D7TTF6	4.90e-11	83.33	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00720 PE=4 SV=...	[more]
D7TU14	5.47e-11	80.56	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00780 PE=4 SV=...	[more]

BLAST of MC08g1644 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57770.1	3.6e-08	92.59	Protein kinase superfamily protein	[more]
AT1G16820.1	6.1e-08	96.15	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar pr...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34892:SF2	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN	coord: 1..40
None	No IPR available	PANTHER	PTHR34892	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN	coord: 1..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1644.1	MC08g1644.1	mRNA