MC08g1642 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1642
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related
Location	MC08: 24384641 .. 24384778 (+)
RNA-Seq Expression	MC08g1642
Synteny	MC08g1642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTCACCAAAAGGCCGAGAAAGGTATGCTTTGGTCATCAATCTCACCGCCGTTTTATACTCAGCGTCCGCTCCCGCTTCTGGGACCT

mRNA sequence

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTCACCAAAAGGCCGAGAAAGGTATGCTTTGGTCATCAATCTCACCGCCGTTTTATACTCAGCGTCCGCTCCCGCTTCTGGGACCT

Coding sequence (CDS)

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTCACCAAAAGGCCGAGAAAGGTATGCTTTGGTCATCAATCTCACCGCCGTTTTATACTCAGCGTCCGCTCCCGCTTCTGGGACCT

Protein sequence

MAHVSDIKLIRTDTTLDLHQKAEKGMLWSSISPPFYTQRPLPLLGP

Homology

[Close]

BLAST of MC08g1642 vs. ExPASy Swiss-Prot
Match: F4J3H7 (Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.5e-08
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWS 30
          MAH+SDIKLIRTDTTLDL QKAEKGM+W+
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMIWT 29

[Close]

BLAST of MC08g1642 vs. NCBI nr
Match: KAF1882010.1 (hypothetical protein Lal_00038653 [Lupinus albus])

HSP 1 Score: 62.0 bits (149), Expect = 6.11e-11
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWSSISPPFYTQ 38
          M H+SDIKLIRTDTTLDL QKAEKGM +S+I  PFYT+
Sbjct: 34 MTHISDIKLIRTDTTLDLSQKAEKGMSYSTIGLPFYTE 71

[Close]

BLAST of MC08g1642 vs. NCBI nr
Match: KAF9664943.1 (hypothetical protein SADUNF_Sadunf16G0071000 [Salix dunnii])

HSP 1 Score: 60.1 bits (144), Expect = 2.96e-10
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWSSISPPFY 36
          MAHVSDIKLIRTDTTLDL QKAEKGM+W + S  FY
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMIWPADSISFY 36

[Close]

BLAST of MC08g1642 vs. NCBI nr
Match: CBI33929.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 58.9 bits (141), Expect = 3.85e-10
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWSSISPPFY 36
          M+HVSDIKLIRTDTTLDL QKAEKGM  ++ S PFY
Sbjct: 1  MSHVSDIKLIRTDTTLDLSQKAEKGMFCNAFSTPFY 36

[Close]

BLAST of MC08g1642 vs. NCBI nr
Match: KAF7078196.1 (hypothetical protein CFC21_082670 [Triticum aestivum] >KAF7083671.1 hypothetical protein CFC21_087439 [Triticum aestivum])

HSP 1 Score: 58.2 bits (139), Expect = 5.76e-10
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWSS 30
          MAH+SDIKLIRTDTTLDL QKAEKGMLW++
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMLWNA 30

[Close]

BLAST of MC08g1642 vs. NCBI nr
Match: PUZ38402.1 (hypothetical protein GQ55_9G193500 [Panicum hallii var. hallii])

HSP 1 Score: 58.2 bits (139), Expect = 5.76e-10
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWS 29
          MAHVSDIKLIRTDTTLDL QKAEKGMLW+
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLWN 29

[Close]

BLAST of MC08g1642 vs. ExPASy TrEMBL
Match: A0A6A5NG25 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00038653 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.96e-11
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWSSISPPFYTQ 38
          M H+SDIKLIRTDTTLDL QKAEKGM +S+I  PFYT+
Sbjct: 34 MTHISDIKLIRTDTTLDLSQKAEKGMSYSTIGLPFYTE 71

[Close]

BLAST of MC08g1642 vs. ExPASy TrEMBL
Match: F6HTC0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00820 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.00e-11
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWSSISPPFYTQR 39
          M+HVSDIKLIRTDTTLDL QKAEKGML +  S PFY+ +
Sbjct: 1  MSHVSDIKLIRTDTTLDLSQKAEKGMLCNGFSTPFYSMQ 39

[Close]

BLAST of MC08g1642 vs. ExPASy TrEMBL
Match: D7TU14 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00780 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.87e-10
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWSSISPPFY 36
          M+HVSDIKLIRTDTTLDL QKAEKGM  ++ S PFY
Sbjct: 1  MSHVSDIKLIRTDTTLDLSQKAEKGMFCNAFSTPFY 36

[Close]

BLAST of MC08g1642 vs. ExPASy TrEMBL
Match: A0A341WF97 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.79e-10
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWSS 30
          MAH+SDIKLIRTDTTLDL QKAEKGMLW++
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMLWNA 30

[Close]

BLAST of MC08g1642 vs. ExPASy TrEMBL
Match: A0A2T7C4Y5 (Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G193500 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.79e-10
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWS 29
          MAHVSDIKLIRTDTTLDL QKAEKGMLW+
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLWN 29

[Close]

BLAST of MC08g1642 vs. TAIR 10
Match: AT3G57770.1 (Protein kinase superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 4.6e-09
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGMLWS 30
          MAH+SDIKLIRTDTTLDL QKAEKGM+W+
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMIWT 29

[Close]

BLAST of MC08g1642 vs. TAIR 10
Match: AT1G16820.1 (vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related )

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-07
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLHQKAEKGM 27
          MAH+SDIKLIRTDTTLDL QKAEKGM
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGM 26

The following BLAST results are available for this feature:

BLAST of MC08g1642 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J3H7	6.5e-08	86.21	Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=...	[more]

BLAST of MC08g1642 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1882010.1	6.11e-11	76.32	hypothetical protein Lal_00038653 [Lupinus albus]	[more]
KAF9664943.1	2.96e-10	80.56	hypothetical protein SADUNF_Sadunf16G0071000 [Salix dunnii]	[more]
CBI33929.3	3.85e-10	77.78	unnamed protein product, partial [Vitis vinifera]	[more]
KAF7078196.1	5.76e-10	86.67	hypothetical protein CFC21_082670 [Triticum aestivum] >KAF7083671.1 hypothetical...	[more]
PUZ38402.1	5.76e-10	93.10	hypothetical protein GQ55_9G193500 [Panicum hallii var. hallii]	[more]

BLAST of MC08g1642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5NG25	2.96e-11	76.32	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00038653 PE=4 SV=1	[more]
F6HTC0	6.00e-11	74.36	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00820 PE=4 SV=...	[more]
D7TU14	1.87e-10	77.78	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00780 PE=4 SV=...	[more]
A0A341WF97	2.79e-10	86.67	Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1	[more]
A0A2T7C4Y5	2.79e-10	93.10	Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G19350...	[more]

BLAST of MC08g1642 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57770.1	4.6e-09	86.21	Protein kinase superfamily protein	[more]
AT1G16820.1	1.9e-07	92.31	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar pr...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34892	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN	coord: 1..39
None	No IPR available	PANTHER	PTHR34892:SF1	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-RELATED	coord: 1..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1642.1	MC08g1642.1	mRNA