MC08g1586 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1586
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Retrotransposon protein
Location	MC08: 23509018 .. 23509729 (+)
RNA-Seq Expression	MC08g1586
Synteny	MC08g1586

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCACATGTAGTGGATTCGGTTGGAACGATGAACTTAAATGCATTGAGAAAAAGAAGGATGTGTACGATGAATGGGTCAAGGTACGACGAATACAAGCATTAATACTTTAATCAATAGTCTGTTATATTTACGCTTGCATTAATATGTGCAGACTCATCCGAATGCCAAGAGTCTTCGAAACAAGTCATTCCCTTACTTTGTGACCTTGCCATTGTATTTGGGAAGGATAGGGCCACAAGTGCAGTCATGAAGACTCCATCTGACATGGCATCTGTTCCAAATCTAGGTGCAGACGAGGACCTGAATACGCAGAACGAAGAACCTTACATACCAGAACCCCCAACCTTCGATTACGTTCTCGGGGAAAACATACCATTGACCCTTTCGAGTAGGCCGGATGGCACAGGGACGTCAAGAACGAGCAAGAGGAAGCAATGTTAGTCTGGGGACTTGGTTGGAGTAGTCCAATCAGAGATGCGCATGCAAACAATTGTTCTGGACAAGATTGCAGCTTGGCCAACCAAAAGACATGAAAGGGCCTCAACACAAAGGAGATGAGTGGTCGCAAAACTTGAGTTCGTCCCTGGAATGACATTGGAGGACTGTTTGGTAGTCAGAAAAACTTTACTTGCGGACTCCAATAAGGTGAACACATTCCTTGACTTCCCACCAAATTGGAAGTACAGGTATTGGATCCGTCTACTTGGAAGG

mRNA sequence

ACCACATGTAGTGGATTCGGTTGGAACGATGAACTTAAATGCATTGAGAAAAAGAAGGATGTGTACGATGAATGGGTCAAGACTCATCCGAATGCCAAGAGTCTTCGAAACAAGTCATTCCCTTACTTTGACCTTGCCATTGTATTTGGGAAGGATAGGGCCACAAGTGCAGTCATGAAGACTCCATCTGACATGGCATCTGTTCCAAATCTAGGTGCAGACGAGGACCTGAATACGCAGAACGAAGAACCTTACATACCAGAACCCCCAACCTTCGATTACGTTCTCGGGGAAAACATACCATTGACCCTTTCGAGTAGGCCGGATGGCACAGGGACGTCAAGAACGAGCAAGAGGAAGCAATGTTAGTCTGGGGACTTGGTTGGAGTAGTCCAATCAGAGATGCGCATGCAAACAATTGTTCTGGACAAGATTGCAGCTTGGCCAACCAAAAGACATGAAAGGGCCTCAACACAAAGGAGATGAGTGGTCGCAAAACTTGAGTTCGTCCCTGGAATGACATTGGAGGACTGTTTGGTAGTCAGAAAAACTTTACTTGCGGACTCCAATAAGGTGAACACATTCCTTGACTTCCCACCAAATTGGAAGTACAGGTATTGGATCCGTCTACTTGGAAGG

Coding sequence (CDS)

ACCACATGTAGTGGATTCGGTTGGAACGATGAACTTAAATGCATTGAGAAAAAGAAGGATGTGTACGATGAATGGGTCAAGACTCATCCGAATGCCAAGAGTCTTCGAAACAAGTCATTCCCTTACTTTGACCTTGCCATTGTATTTGGGAAGGATAGGGCCACAAGTGCAGTCATGAAGACTCCATCTGACATGGCATCTGTTCCAAATCTAGGTGCAGACGAGGACCTGAATACGCAGAACGAAGAACCTTACATACCAGAACCCCCAACCTTCGATTACGTTCTCGGGGAAAACATACCATTGACCCTTTCGAGTAGGCCGGATGGCACAGGGACGTCAAGAACGAGCAAGAGGAAGCAATGTTAGTCTGGGGACTTGGTTGGAGTAGTCCAATCAGAGATGCGCATGCAAACAATTGTTCTGGACAAGATTGCAGCTTGGCCAACCAAAAGACATGAAAGGGCCTCAACACAAAGGAGATGAGTGGTCGCAAAACTTGAGTTCGTCCCTGGAATGACATTGGAGGACTGTTTGGTAGTCAGAAAAACTTTACTTGCGGACTCCAATAAGGTGAACACATTCCTTGACTTCCCACCAAATTGGAAGTACAGGTATTGGATCCGTCTACTTGGAAGG

Protein sequence

TTCSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFDLAIVFGKDRATSAVMKTPSDMASVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRKQCUSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRUVVAKLEFVPGMTLEDCLVVRKTLLADSNKVNTFLDFPPNWKYRYWIRLLGR

Homology

[Close]

BLAST of MC08g1586 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia])

HSP 1 Score: 169 bits (429), Expect = 4.63e-49
Identity = 85/213 (39.91%), Postives = 135/213 (63.38%), Query Frame = 0


Query: 5   GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFDLAIVFGKDRATSAVMKTPSD 64
           GFGWND+ KCIE +K+V+D+WVK+HPNAK LRNK   Y DL + FGKDRAT A +  P D
Sbjct: 4   GFGWNDDHKCIEAEKEVFDDWVKSHPNAKGLRNKPPHYDDLTVAFGKDRATGANLDCPVD 63

Query: 65  MASVPNLGADEDLNTQNEEPYIPEPPTFDYV---LGENIPLTLSSRPD-GTGTSRTSKRK 124
           MAS       ED + + ++ YIP+PP F+     + E++P T +S+P  GT +  + +++
Sbjct: 64  MASSAAATIAEDAHFEAQDFYIPDPPMFNTTEDAIEEDLPNTPTSKPTIGTSSGGSKRKR 123

Query: 125 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 184
              + ++V VV++ MRMQT  L+K+A WP K+ E+   +R+ V  +L+ +P +   D + 
Sbjct: 124 SGYTSEMVDVVRTNMRMQTAHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEANDYVR 183

Query: 185 VRKTLLADSNKVNTFLDFPPNWKYRYWIRLLGR 213
           +   L+ +  K  +FL+ P  +K  + ++LLG+
Sbjct: 184 LVGILMTNVKKSISFLEVPIEFKKMFCMQLLGK 216

[Close]

BLAST of MC08g1586 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (443), Expect = 5.25e-49
Identity = 88/201 (43.78%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 3   CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKT 62
           CSGFGWN+  KCIE +K V+D+WVK HPNA+ L NK FPYF DL +VFG+DRAT    KT
Sbjct: 197 CSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKT 256

Query: 63  PSDMASVPNLGADEDLNTQNEEPY-IPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRK 122
           P +M+S      +ED    N E + IP P   +   GE++P T +S     G+SR SK++
Sbjct: 257 PVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKR 316

Query: 123 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 182
           +  SGDL+   ++ MR  +  + KIA W  ++ E  S+  + + A+L+ +PGM ++DCL+
Sbjct: 317 RSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLI 376

Query: 183 VRKTLLADSNKVNTFLDFPPN 201
           V ++LL D   ++ FLD+P N
Sbjct: 377 VAESLLPDPTMLHAFLDYPTN 397

[Close]

BLAST of MC08g1586 vs. NCBI nr
Match: XP_008460440.1 (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo])

HSP 1 Score: 166 bits (419), Expect = 9.83e-48
Identity = 84/199 (42.21%), Postives = 128/199 (64.32%), Query Frame = 0


Query: 3   CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKT 62
           CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KT
Sbjct: 5   CSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKT 64

Query: 63  PSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRK 122
           P +M   +     ++D++   E+  IP P   +   GE++  T +S     G+S+ SK++
Sbjct: 65  PIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKR 124

Query: 123 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 182
           +  S DL+   ++ MR  +  + KIAAW  ++ E  S+  + + A+L+ +PGM ++DCL+
Sbjct: 125 RSYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLI 184

Query: 183 VRKTLLADSNKVNTFLDFP 199
           V ++LL D   ++TFLD+P
Sbjct: 185 VVESLLPDPIMLHTFLDYP 203

[Close]

BLAST of MC08g1586 vs. NCBI nr
Match: KAA0067273.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (419), Expect = 1.01e-47
Identity = 84/199 (42.21%), Postives = 128/199 (64.32%), Query Frame = 0


Query: 3   CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKT 62
           CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KT
Sbjct: 6   CSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKT 65

Query: 63  PSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRK 122
           P +M   +     ++D++   E+  IP P   +   GE++  T +S     G+S+ SK++
Sbjct: 66  PIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKR 125

Query: 123 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 182
           +  S DL+   ++ MR  +  + KIAAW  ++ E  S+  + + A+L+ +PGM ++DCL+
Sbjct: 126 RSYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLI 185

Query: 183 VRKTLLADSNKVNTFLDFP 199
           V ++LL D   ++TFLD+P
Sbjct: 186 VVESLLPDPIMLHTFLDYP 204

[Close]

BLAST of MC08g1586 vs. NCBI nr
Match: TYK10886.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 161 bits (407), Expect = 6.56e-46
Identity = 83/199 (41.71%), Postives = 126/199 (63.32%), Query Frame = 0


Query: 3   CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKT 62
           CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KT
Sbjct: 6   CSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKT 65

Query: 63  PSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRK 122
           P +M   +     ++D++   E+  IP P   +   GE++  T +S     G+SR SK++
Sbjct: 66  PVEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYDVGSSRPSKKR 125

Query: 123 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 182
           +  S DL+    + MR  +  + KI AW  ++ E  S+  + + A+L+ +PGM ++DCL+
Sbjct: 126 RSYSEDLMDTFCASMRETSKEIRKITAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLI 185

Query: 183 VRKTLLADSNKVNTFLDFP 199
           V ++LL D   ++TFL++P
Sbjct: 186 VVESLLPDPIMLHTFLNYP 204

[Close]

BLAST of MC08g1586 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 2.24e-49
Identity = 85/213 (39.91%), Postives = 135/213 (63.38%), Query Frame = 0


Query: 5   GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFDLAIVFGKDRATSAVMKTPSD 64
           GFGWND+ KCIE +K+V+D+WVK+HPNAK LRNK   Y DL + FGKDRAT A +  P D
Sbjct: 4   GFGWNDDHKCIEAEKEVFDDWVKSHPNAKGLRNKPPHYDDLTVAFGKDRATGANLDCPVD 63

Query: 65  MASVPNLGADEDLNTQNEEPYIPEPPTFDYV---LGENIPLTLSSRPD-GTGTSRTSKRK 124
           MAS       ED + + ++ YIP+PP F+     + E++P T +S+P  GT +  + +++
Sbjct: 64  MASSAAATIAEDAHFEAQDFYIPDPPMFNTTEDAIEEDLPNTPTSKPTIGTSSGGSKRKR 123

Query: 125 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 184
              + ++V VV++ MRMQT  L+K+A WP K+ E+   +R+ V  +L+ +P +   D + 
Sbjct: 124 SGYTSEMVDVVRTNMRMQTAHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEANDYVR 183

Query: 185 VRKTLLADSNKVNTFLDFPPNWKYRYWIRLLGR 213
           +   L+ +  K  +FL+ P  +K  + ++LLG+
Sbjct: 184 LVGILMTNVKKSISFLEVPIEFKKMFCMQLLGK 216

[Close]

BLAST of MC08g1586 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 2.54e-49
Identity = 88/201 (43.78%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 3   CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKT 62
           CSGFGWN+  KCIE +K V+D+WVK HPNA+ L NK FPYF DL +VFG+DRAT    KT
Sbjct: 197 CSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKT 256

Query: 63  PSDMASVPNLGADEDLNTQNEEPY-IPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRK 122
           P +M+S      +ED    N E + IP P   +   GE++P T +S     G+SR SK++
Sbjct: 257 PVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKR 316

Query: 123 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 182
           +  SGDL+   ++ MR  +  + KIA W  ++ E  S+  + + A+L+ +PGM ++DCL+
Sbjct: 317 RSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLI 376

Query: 183 VRKTLLADSNKVNTFLDFPPN 201
           V ++LL D   ++ FLD+P N
Sbjct: 377 VAESLLPDPTMLHAFLDYPTN 397

[Close]

BLAST of MC08g1586 vs. ExPASy TrEMBL
Match: A0A1S3CC17 (uncharacterized protein LOC103499248 OS=Cucumis melo OX=3656 GN=LOC103499248 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 4.76e-48
Identity = 84/199 (42.21%), Postives = 128/199 (64.32%), Query Frame = 0


Query: 3   CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKT 62
           CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KT
Sbjct: 5   CSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKT 64

Query: 63  PSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRK 122
           P +M   +     ++D++   E+  IP P   +   GE++  T +S     G+S+ SK++
Sbjct: 65  PIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKR 124

Query: 123 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 182
           +  S DL+   ++ MR  +  + KIAAW  ++ E  S+  + + A+L+ +PGM ++DCL+
Sbjct: 125 RSYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLI 184

Query: 183 VRKTLLADSNKVNTFLDFP 199
           V ++LL D   ++TFLD+P
Sbjct: 185 VVESLLPDPIMLHTFLDYP 203

[Close]

BLAST of MC08g1586 vs. ExPASy TrEMBL
Match: A0A5A7VGQ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00930 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 4.91e-48
Identity = 84/199 (42.21%), Postives = 128/199 (64.32%), Query Frame = 0


Query: 3   CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKT 62
           CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KT
Sbjct: 6   CSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKT 65

Query: 63  PSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRK 122
           P +M   +     ++D++   E+  IP P   +   GE++  T +S     G+S+ SK++
Sbjct: 66  PIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKR 125

Query: 123 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 182
           +  S DL+   ++ MR  +  + KIAAW  ++ E  S+  + + A+L+ +PGM ++DCL+
Sbjct: 126 RSYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLI 185

Query: 183 VRKTLLADSNKVNTFLDFP 199
           V ++LL D   ++TFLD+P
Sbjct: 186 VVESLLPDPIMLHTFLDYP 204

[Close]

BLAST of MC08g1586 vs. ExPASy TrEMBL
Match: A0A5D3CKC1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00580 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 3.18e-46
Identity = 83/199 (41.71%), Postives = 126/199 (63.32%), Query Frame = 0


Query: 3   CSGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATSAVMKT 62
           CS FGWN+E KCIE +K V+D+WVK HPNA+ L NKSFPYF DL I+FG+DRAT    KT
Sbjct: 6   CSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKT 65

Query: 63  PSDMA-SVPNLGADEDLNTQNEEPYIPEPPTFDYVLGENIPLTLSSRPDGTGTSRTSKRK 122
           P +M   +     ++D++   E+  IP P   +   GE++  T +S     G+SR SK++
Sbjct: 66  PVEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYDVGSSRPSKKR 125

Query: 123 QCXSGDLVGVVQSEMRMQTIVLDKIAAWPTKRHERASTQRRXVVAKLEFVPGMTLEDCLV 182
           +  S DL+    + MR  +  + KI AW  ++ E  S+  + + A+L+ +PGM ++DCL+
Sbjct: 126 RSYSEDLMDTFCASMRETSKEIRKITAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLI 185

Query: 183 VRKTLLADSNKVNTFLDFP 199
           V ++LL D   ++TFL++P
Sbjct: 186 VVESLLPDPIMLHTFLNYP 204

[Close]

BLAST of MC08g1586 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 4.5e-06
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 4   SGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYFD-LAIVFGKDRAT 56
           SGFGW+   K      +V+ +++K HPN K LR  +F +FD L I+FG+  AT
Sbjct: 92  SGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFDELQIIFGEGVAT 144

[Close]

BLAST of MC08g1586 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 31/95 (32.63%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 4   SGFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFPYF-DLAIVFGKDRATS--AVMK 63
           SGFGW+ E K      +V+ +++K HPN K ++ +S  +F DL I+FG   AT   AV  
Sbjct: 88  SGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDHFEDLQIIFGDVVATGSFAVGM 147

Query: 64  TPSDMASVPNLG-ADEDLNTQNEEPYIPEPPTFDY 95
           + S    +  +G   +   T N++  I E   F +
Sbjct: 148 SDSTCPRIYTVGERSQGKETVNQDENIEEVYEFSF 182

[Close]

BLAST of MC08g1586 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 23/75 (30.67%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 5   GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFP-YFDLAIVFGKDRATSAVMKTPS 64
           GF W+D  + +     V+DE++K HP+++S R KS P Y DL +V+    +     ++ S
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVYSDGMSEHKAEESIS 147

Query: 65  DMASVPNLGADEDLN 79
           +  S   +  D+  N
Sbjct: 148 EGESKTLIQEDDGYN 162

[Close]

BLAST of MC08g1586 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 23/75 (30.67%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 5   GFGWNDELKCIEKKKDVYDEWVKTHPNAKSLRNKSFP-YFDLAIVFGKDRATSAVMKTPS 64
           GF W+D  + +     V+DE++K HP+++S R KS P Y DL +V+    +     ++ S
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVYSDGMSEHKAEESIS 147

Query: 65  DMASVPNLGADEDLN 79
           +  S   +  D+  N
Sbjct: 148 EGESKTLIQEDDGYN 162

The following BLAST results are available for this feature:

BLAST of MC08g1586 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1586 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158565.1	4.63e-49	39.91	uncharacterized protein LOC111025018 [Momordica charantia]	[more]
TYK07921.1	5.25e-49	43.78	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
XP_008460440.1	9.83e-48	42.21	PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]	[more]
KAA0067273.1	1.01e-47	42.21	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK10886.1	6.56e-46	41.71	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MC08g1586 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DW73	2.24e-49	39.91	uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A5D3C7T4	2.54e-49	43.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CC17	4.76e-48	42.21	uncharacterized protein LOC103499248 OS=Cucumis melo OX=3656 GN=LOC103499248 PE=...	[more]
A0A5A7VGQ0	4.91e-48	42.21	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CKC1	3.18e-46	41.71	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MC08g1586 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27260.1	4.5e-06	43.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G30140.1	1.3e-05	32.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.1	1.4e-04	30.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.4e-04	30.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 4..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1586.1	MC08g1586.1	mRNA