MC08g1476 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g1476
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 19314342 .. 19314782 (+)
RNA-Seq ExpressionMC08g1476
SyntenyMC08g1476
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAATTCCGATCCAATTCAGCCCCAAAATTTGGTAGTAATAAGAGACGACTATTTTCACCTGGAATCCCCTGTTTTTCCGCCGACTCGCCACGAAGATTTGCCAGTTCCTCCTCCACCCGAGGAATCGCCATCGCCGTCGCCGTCGCCGGCGACTTCCGAACCGGCGGCGGCTTCGGAATTGCGAGGCAGAGTCGGCGCTGAAGCGTTGAGGCTTCTGCGATTGAGTCGCGATGTTGTTAAAGCGAAGGGGATTTCCAGAATTCTCCGATTTAGATCCTCCTTTTTCGTCGTTCCGGTTACTGCAACTGCAATGGCTGCTCTGTTTCTGTTCTGTTGGTTGAAGCTGAAGATGCGGCTGCCATGGCGGCCACGAGTCTCGGTGAATCCAGATAACGAACAGCGTTTGCGTCTTCTCCTCAAGCACAAGGATCAGGTTCTT

mRNA sequence

GAGAATTCCGATCCAATTCAGCCCCAAAATTTGGTAGTAATAAGAGACGACTATTTTCACCTGGAATCCCCTGTTTTTCCGCCGACTCGCCACGAAGATTTGCCAGTTCCTCCTCCACCCGAGGAATCGCCATCGCCGTCGCCGTCGCCGGCGACTTCCGAACCGGCGGCGGCTTCGGAATTGCGAGGCAGAGTCGGCGCTGAAGCGTTGAGGCTTCTGCGATTGAGTCGCGATGTTGTTAAAGCGAAGGGGATTTCCAGAATTCTCCGATTTAGATCCTCCTTTTTCGTCGTTCCGGTTACTGCAACTGCAATGGCTGCTCTGTTTCTGTTCTGTTGGTTGAAGCTGAAGATGCGGCTGCCATGGCGGCCACGAGTCTCGGTGAATCCAGATAACGAACAGCGTTTGCGTCTTCTCCTCAAGCACAAGGATCAGGTTCTT

Coding sequence (CDS)

GAGAATTCCGATCCAATTCAGCCCCAAAATTTGGTAGTAATAAGAGACGACTATTTTCACCTGGAATCCCCTGTTTTTCCGCCGACTCGCCACGAAGATTTGCCAGTTCCTCCTCCACCCGAGGAATCGCCATCGCCGTCGCCGTCGCCGGCGACTTCCGAACCGGCGGCGGCTTCGGAATTGCGAGGCAGAGTCGGCGCTGAAGCGTTGAGGCTTCTGCGATTGAGTCGCGATGTTGTTAAAGCGAAGGGGATTTCCAGAATTCTCCGATTTAGATCCTCCTTTTTCGTCGTTCCGGTTACTGCAACTGCAATGGCTGCTCTGTTTCTGTTCTGTTGGTTGAAGCTGAAGATGCGGCTGCCATGGCGGCCACGAGTCTCGGTGAATCCAGATAACGAACAGCGTTTGCGTCTTCTCCTCAAGCACAAGGATCAGGTTCTT

Protein sequence

ENSDPIQPQNLVVIRDDYFHLESPVFPPTRHEDLPVPPPPEESPSPSPSPATSEPAAASELRGRVGAEALRLLRLSRDVVKAKGISRILRFRSSFFVVPVTATAMAALFLFCWLKLKMRLPWRPRVSVNPDNEQRLRLLLKHKDQVL
Homology
BLAST of MC08g1476 vs. NCBI nr
Match: XP_038889624.1 (uncharacterized protein LOC120079493 [Benincasa hispida])

HSP 1 Score: 93.6 bits (231), Expect = 1.29e-20
Identity = 77/158 (48.73%), Postives = 98/158 (62.03%), Query Frame = 0

Query: 1   ENSDPIQPQNLVVIRDDYF-HLESPVFPPTRHEDLPVPP---PPEESPSPSPSPATSEPA 60
           +N DPI+P+N +VIR++YF H ESPVFPP  HEDLPV       ++S S   S ++S P 
Sbjct: 10  QNPDPIRPENFLVIRENYFVHEESPVFPPIHHEDLPVGSVSIASDQSESSELSESSSAPT 69

Query: 61  AASELRGR--VGAEALRLLRLSRDVVKAKGISRILRFRSSFF----VVPVTATAMAALFL 120
             S+LR R  VG   LR    S ++ KAK +S I+ F S       V PVTA A   + L
Sbjct: 70  -TSDLRWRAVVGEAILR----SCEMFKAKVVSGIVGFGSYAVRLCSVFPVTAMAAVLVIL 129

Query: 121 FCWLKLKM--RLPWRPR-VSVNPDNEQRLRLLLKHKDQ 145
              LK+KM  RLPWRPR V+V+ DNE RL LLL+HKD+
Sbjct: 130 VFLLKMKMKLRLPWRPRSVAVSRDNEDRLVLLLQHKDE 162

BLAST of MC08g1476 vs. NCBI nr
Match: XP_022999312.1 (uncharacterized protein LOC111493726 isoform X1 [Cucurbita maxima])

HSP 1 Score: 91.3 bits (225), Expect = 1.42e-19
Identity = 79/174 (45.40%), Postives = 98/174 (56.32%), Query Frame = 0

Query: 7   QPQNLVVIRDDYF-HLESPVFPPTRHEDLPV-------------------PPPPEESPSP 66
           Q QN +VIR+DYF H +SPVFPPT H+  P+                   P  P + PS 
Sbjct: 9   QAQNFLVIREDYFVHYKSPVFPPTHHQQFPLITPTHAHSEPSHESEPSNQPSEPSDEPSD 68

Query: 67  SPS--PATSEPA--AASELRGRVGAEALRLLRLSR-DVVKAKGISRILRF----RSSFFV 126
            PS  P+  EP+  AAS+L+ R   EA+    + R ++VKAK IS I+ F    R     
Sbjct: 69  EPSDEPSDDEPSSPAASDLQSRAVGEAI----MRRWEIVKAKVISGIVGFGSHARRLCSA 128

Query: 127 VPVTATAMAA-----LFLFCWLKLKMRLPWRPRVS-VNPDNEQRLRLLLKHKDQ 145
           +PVTA A A      LFLF  +K+KMRLPWRP  + V PDNE RL LLLKHKDQ
Sbjct: 129 LPVTAMATALFLLLLLFLFK-IKIKMRLPWRPPTAGVCPDNEHRLLLLLKHKDQ 177

BLAST of MC08g1476 vs. NCBI nr
Match: XP_022999313.1 (uncharacterized protein LOC111493726 isoform X2 [Cucurbita maxima])

HSP 1 Score: 90.1 bits (222), Expect = 3.11e-19
Identity = 80/163 (49.08%), Postives = 97/163 (59.51%), Query Frame = 0

Query: 7   QPQNLVVIRDDYF-HLESPVFPPTR------HEDLPV--PPPPEESPSPSPS--PATSEP 66
           Q QN +VIR+DYF H +SPVFPPT       HE  P   P  P + PS  PS  P+  EP
Sbjct: 9   QAQNFLVIREDYFVHYKSPVFPPTHAHSEPSHESEPSNQPSEPSDEPSDEPSDEPSDDEP 68

Query: 67  A--AASELRGRVGAEALRLLRLSR-DVVKAKGISRILRF----RSSFFVVPVTATAMAA- 126
           +  AAS+L+ R   EA+    + R ++VKAK IS I+ F    R     +PVTA A A  
Sbjct: 69  SSPAASDLQSRAVGEAI----MRRWEIVKAKVISGIVGFGSHARRLCSALPVTAMATALF 128

Query: 127 ----LFLFCWLKLKMRLPWRPRVS-VNPDNEQRLRLLLKHKDQ 145
               LFLF  +K+KMRLPWRP  + V PDNE RL LLLKHKDQ
Sbjct: 129 LLLLLFLFK-IKIKMRLPWRPPTAGVCPDNEHRLLLLLKHKDQ 166

BLAST of MC08g1476 vs. NCBI nr
Match: XP_022946584.1 (uncharacterized protein LOC111450604 isoform X1 [Cucurbita moschata])

HSP 1 Score: 87.0 bits (214), Expect = 5.46e-18
Identity = 77/171 (45.03%), Postives = 94/171 (54.97%), Query Frame = 0

Query: 5   PIQPQNLVVIRDDYF-HLESPVFPPTR-HEDLPVPPPPEESPSPSPSPATSEPA------ 64
           P Q QNL+VIR+DYF H +SPVFPP   H +      P   PS  PS A+ EP+      
Sbjct: 7   PTQAQNLLVIREDYFVHYKSPVFPPAHAHSESSHESEPSNEPSNEPSEASDEPSDGEPSD 66

Query: 65  -----------AASELRGRVGAEALRLLRLSR-DVVKAKGISRILRF----RSSFFVVPV 124
                      A S+L+ R   EA+    + R ++VKAK IS I+ F    R     +PV
Sbjct: 67  DEPSDDEASSPATSDLQSRAVGEAI----MRRWEIVKAKVISGIVGFGFHARRLCSALPV 126

Query: 125 TATAMAALFLFCWL-----KLKMRLPWRPRVS-VNPDNEQRLRLLLKHKDQ 145
           TA A AALFL   L     K+KMRLPWRP  + V PDN+ RL LLLKHKDQ
Sbjct: 127 TAMA-AALFLLLLLFLFKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQ 172

BLAST of MC08g1476 vs. NCBI nr
Match: XP_023520476.1 (uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 85.1 bits (209), Expect = 2.08e-17
Identity = 75/158 (47.47%), Postives = 91/158 (57.59%), Query Frame = 0

Query: 7   QPQNLVVIRDDYF-HLESPVFPPTR-HEDLPVPPPPEESPSPSPS---PATSEPA--AAS 66
           QPQNL+VIR+DYF H +SPVFPP   H D       +E     PS   P+  EP+  A S
Sbjct: 9   QPQNLLVIREDYFVHYKSPVFPPAHAHSD-------DEPSDGEPSDDEPSDDEPSSPATS 68

Query: 67  ELRGRVGAEALRLLRLSRDVVKAKGISRILRF----RSSFFVVPVTATAMAALFLFCWL- 126
           +L+ R   EA+       ++VKAK IS I+ F    R     +PVTA A AALFL   L 
Sbjct: 69  DLQSRAVGEAIMR---GWEIVKAKVISGIVGFGSHARRLCSALPVTAMA-AALFLLLLLF 128

Query: 127 ------KLKMRLPWRPRVS-VNPDNEQRLRLLLKHKDQ 145
                 K+KMRLPWRP  + V PDN+ RL LLLKHKDQ
Sbjct: 129 LFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQ 155

BLAST of MC08g1476 vs. ExPASy TrEMBL
Match: A0A6J1KAJ3 (uncharacterized protein LOC111493726 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493726 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.88e-20
Identity = 79/174 (45.40%), Postives = 98/174 (56.32%), Query Frame = 0

Query: 7   QPQNLVVIRDDYF-HLESPVFPPTRHEDLPV-------------------PPPPEESPSP 66
           Q QN +VIR+DYF H +SPVFPPT H+  P+                   P  P + PS 
Sbjct: 9   QAQNFLVIREDYFVHYKSPVFPPTHHQQFPLITPTHAHSEPSHESEPSNQPSEPSDEPSD 68

Query: 67  SPS--PATSEPA--AASELRGRVGAEALRLLRLSR-DVVKAKGISRILRF----RSSFFV 126
            PS  P+  EP+  AAS+L+ R   EA+    + R ++VKAK IS I+ F    R     
Sbjct: 69  EPSDEPSDDEPSSPAASDLQSRAVGEAI----MRRWEIVKAKVISGIVGFGSHARRLCSA 128

Query: 127 VPVTATAMAA-----LFLFCWLKLKMRLPWRPRVS-VNPDNEQRLRLLLKHKDQ 145
           +PVTA A A      LFLF  +K+KMRLPWRP  + V PDNE RL LLLKHKDQ
Sbjct: 129 LPVTAMATALFLLLLLFLFK-IKIKMRLPWRPPTAGVCPDNEHRLLLLLKHKDQ 177

BLAST of MC08g1476 vs. ExPASy TrEMBL
Match: A0A6J1KJA9 (uncharacterized protein LOC111493726 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493726 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.50e-19
Identity = 80/163 (49.08%), Postives = 97/163 (59.51%), Query Frame = 0

Query: 7   QPQNLVVIRDDYF-HLESPVFPPTR------HEDLPV--PPPPEESPSPSPS--PATSEP 66
           Q QN +VIR+DYF H +SPVFPPT       HE  P   P  P + PS  PS  P+  EP
Sbjct: 9   QAQNFLVIREDYFVHYKSPVFPPTHAHSEPSHESEPSNQPSEPSDEPSDEPSDEPSDDEP 68

Query: 67  A--AASELRGRVGAEALRLLRLSR-DVVKAKGISRILRF----RSSFFVVPVTATAMAA- 126
           +  AAS+L+ R   EA+    + R ++VKAK IS I+ F    R     +PVTA A A  
Sbjct: 69  SSPAASDLQSRAVGEAI----MRRWEIVKAKVISGIVGFGSHARRLCSALPVTAMATALF 128

Query: 127 ----LFLFCWLKLKMRLPWRPRVS-VNPDNEQRLRLLLKHKDQ 145
               LFLF  +K+KMRLPWRP  + V PDNE RL LLLKHKDQ
Sbjct: 129 LLLLLFLFK-IKIKMRLPWRPPTAGVCPDNEHRLLLLLKHKDQ 166

BLAST of MC08g1476 vs. ExPASy TrEMBL
Match: A0A5A7T5Z8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1133G00150 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.13e-14
Identity = 72/165 (43.64%), Postives = 90/165 (54.55%), Query Frame = 0

Query: 1   ENSDPIQPQNLVVIRDDYF-HLESPVFPPTRHEDLPV-------PPPPEESPSPSPSPAT 60
           E  +P   +N +VIRDDYF H ESPVFPP  HEDLPV       P   E   S S   + 
Sbjct: 8   EAPNPNPDENFLVIRDDYFVHHESPVFPPILHEDLPVLTVENHIPSSDESESSESSDSSD 67

Query: 61  SEPAAASELRGRVGAEALRLLRLSRDVVKAKGISRIL-------RFRSSFFVVPVTATAM 120
           S    +S++R R  A  +  +    +VVKAK +S I+       R RS F      ATAM
Sbjct: 68  SSTPESSDMRLR--AVVVEAIMRGCEVVKAKVVSGIVGFGCYGVRLRSIF-----GATAM 127

Query: 121 AALF--LFCWLKLKMR--LPWRPR-VSVNPDNEQRLRLLLKHKDQ 145
           A L   L   LK+KM+  LPWRPR ++V  D E+ L LLLKHKD+
Sbjct: 128 AGLLIVLLFLLKMKMKVWLPWRPRGLAVRRDKEEPLVLLLKHKDE 165

BLAST of MC08g1476 vs. ExPASy TrEMBL
Match: A0A1S3CPJ3 (uncharacterized protein LOC103503357 OS=Cucumis melo OX=3656 GN=LOC103503357 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.13e-14
Identity = 72/165 (43.64%), Postives = 90/165 (54.55%), Query Frame = 0

Query: 1   ENSDPIQPQNLVVIRDDYF-HLESPVFPPTRHEDLPV-------PPPPEESPSPSPSPAT 60
           E  +P   +N +VIRDDYF H ESPVFPP  HEDLPV       P   E   S S   + 
Sbjct: 8   EAPNPNPDENFLVIRDDYFVHHESPVFPPILHEDLPVLTVENHIPSSDESESSESSDSSD 67

Query: 61  SEPAAASELRGRVGAEALRLLRLSRDVVKAKGISRIL-------RFRSSFFVVPVTATAM 120
           S    +S++R R  A  +  +    +VVKAK +S I+       R RS F      ATAM
Sbjct: 68  SSTPESSDMRLR--AVVVEAIMRGCEVVKAKVVSGIVGFGCYGVRLRSIF-----GATAM 127

Query: 121 AALF--LFCWLKLKMR--LPWRPR-VSVNPDNEQRLRLLLKHKDQ 145
           A L   L   LK+KM+  LPWRPR ++V  D E+ L LLLKHKD+
Sbjct: 128 AGLLIVLLFLLKMKMKVWLPWRPRGLAVRRDKEEPLVLLLKHKDE 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038889624.11.29e-2048.73uncharacterized protein LOC120079493 [Benincasa hispida][more]
XP_022999312.11.42e-1945.40uncharacterized protein LOC111493726 isoform X1 [Cucurbita maxima][more]
XP_022999313.13.11e-1949.08uncharacterized protein LOC111493726 isoform X2 [Cucurbita maxima][more]
XP_022946584.15.46e-1845.03uncharacterized protein LOC111450604 isoform X1 [Cucurbita moschata][more]
XP_023520476.12.08e-1747.47uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1KAJ36.88e-2045.40uncharacterized protein LOC111493726 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1KJA91.50e-1949.08uncharacterized protein LOC111493726 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A5A7T5Z81.13e-1443.64Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CPJ31.13e-1443.64uncharacterized protein LOC103503357 OS=Cucumis melo OX=3656 GN=LOC103503357 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..60
NoneNo IPR availablePANTHERPTHR37206TRANSMEMBRANE PROTEINcoord: 7..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g1476.1MC08g1476.1mRNA