MC08g1475 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1475
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	PIG-H domain-containing protein
Location	MC08: 19303833 .. 19304613 (+)
RNA-Seq Expression	MC08g1475
Synteny	MC08g1475

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATACATATATTTCTGCCACAGTAAATGGCCTTTTGAAGCAGTTGATATCCACCACGTTGTTGTTCTTAGGAGTAAGAGTGATGGAAAGAGTTTCCTCTTGTGTATTTTTGCTGCCCTCGCGTTCTATTTTTTCCTACTCAAGGTAATTTGTTGCTGATCTCATTCTCACTCAATTTTTTATGTGTAATTTGAAATTTGAACATGAAATCATCTAATTCTTACCAGTTTGACTTTGTTGTCTTTATTTTTGTATTTGATCTTGTTATTACTATTATTTTAGTCTCAATATGTTTGTAAAATGTAATGTATGTACTGCTCAATTTCATGGCCTTAGAATATCAATTCATTTACAGGTATATTCTATCAAAGTTTGTTGAAACGAATTGAACTGAACTGCCAAAATATTCCATTTTAAGATGTTTATTTGAGCTCAAAGAAATAGTTACATAAATTGTAGTGAGTGTATGGATAGATAGGATTACTTTTGATATTCGAACAACACATTTGGGAAATCTGTTAAGTTATTTTCAGAGCATGACTATTGACTCTGGGAACAGGACCAATCAATCTTTGTCATCTTTTGGTGCTTGGTCTTGAACAGATTCTTTGCCAAGAAGTTGTTCAAGGGAACTGTTGCAAAAGGTGAGGAATTGAGGAAGGTTCTCTGTCTAATTCCTTATAATGTTATCATATCCTTTTGATGGAAGGGGACGTCTAAATGTGCAGAGTCTGTTACGATTATGCAAAATTTTGGAGTCCAACTTGAAACTCACTATAGG

mRNA sequence

AGATACATATATTTCTGCCACAGTAAATGGCCTTTTGAAGCAGTTGATATCCACCACGTTGTTGTTCTTAGGAGTAAGAGTGATGGAAAGAGTTTCCTCTTGTGTATTTTTGCTGCCCTCGCGTTCTATTTTTTCCTACTCAAGGACCAATCAATCTTTGTCATCTTTTGGTGCTTGGTCTTGAACAGATTCTTTGCCAAGAAGTTGTTCAAGGGAACTGTTGCAAAAGAGTCTGTTACGATTATGCAAAATTTTGGAGTCCAACTTGAAACTCACTATAGG

Coding sequence (CDS)

AGATACATATATTTCTGCCACAGTAAATGGCCTTTTGAAGCAGTTGATATCCACCACGTTGTTGTTCTTAGGAGTAAGAGTGATGGAAAGAGTTTCCTCTTGTGTATTTTTGCTGCCCTCGCGTTCTATTTTTTCCTACTCAAGGACCAATCAATCTTTGTCATCTTTTGGTGCTTGGTCTTGAACAGATTCTTTGCCAAGAAGTTGTTCAAGGGAACTGTTGCAAAAGAGTCTGTTACGATTATGCAAAATTTTGGAGTCCAACTTGAAACTCACTATAGG

Protein sequence

RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLVLNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR

Homology

[Close]

BLAST of MC08g1475 vs. NCBI nr
Match: XP_022158294.1 (uncharacterized protein LOC111024811 isoform X2 [Momordica charantia])

HSP 1 Score: 149 bits (375), Expect = 2.44e-43
Identity = 77/94 (81.91%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 1   RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
           RY YF  SK P EAVDIHHVVV RSK  GK FLLCIFAALAF FFLLKDQSIFV+FWCLV
Sbjct: 10  RYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQSIFVVFWCLV 69

Query: 61  LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
           LN FFAKKLF+G V KESVT+M NFGVQLETHYR
Sbjct: 70  LNVFFAKKLFRGMVEKESVTVMPNFGVQLETHYR 103

[Close]

BLAST of MC08g1475 vs. NCBI nr
Match: XP_022158291.1 (uncharacterized protein LOC111024811 isoform X1 [Momordica charantia] >XP_022158293.1 uncharacterized protein LOC111024811 isoform X1 [Momordica charantia])

HSP 1 Score: 149 bits (375), Expect = 2.52e-43
Identity = 77/94 (81.91%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 1   RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
           RY YF  SK P EAVDIHHVVV RSK  GK FLLCIFAALAF FFLLKDQSIFV+FWCLV
Sbjct: 10  RYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQSIFVVFWCLV 69

Query: 61  LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
           LN FFAKKLF+G V KESVT+M NFGVQLETHYR
Sbjct: 70  LNVFFAKKLFRGMVEKESVTVMPNFGVQLETHYR 103

[Close]

BLAST of MC08g1475 vs. NCBI nr
Match: XP_022145301.1 (uncharacterized protein LOC111014789, partial [Momordica charantia])

HSP 1 Score: 144 bits (364), Expect = 7.53e-42
Identity = 76/94 (80.85%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 1   RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
           RY YF  SKWP EAVDIHHVV LRSK  GK FLLCIFAALAF F LLKDQSIFV+FWCLV
Sbjct: 10  RYGYFRDSKWPSEAVDIHHVV-LRSKGGGKGFLLCIFAALAFCFLLLKDQSIFVVFWCLV 69

Query: 61  LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
           LN FFAKKLF+ TV KESV +M NFGVQLETHYR
Sbjct: 70  LNVFFAKKLFRETVEKESVMVMPNFGVQLETHYR 102

[Close]

BLAST of MC08g1475 vs. NCBI nr
Match: XP_038876673.1 (uncharacterized protein LOC120069067 [Benincasa hispida])

HSP 1 Score: 137 bits (345), Expect = 9.00e-39
Identity = 69/94 (73.40%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 1   RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
           RY YF   KWP EAVDIHHVVVLR++S  K FL C FAALAF FFLLK QSIFV  WCLV
Sbjct: 10  RYGYFSDRKWPSEAVDIHHVVVLRNRSGEKGFLFCFFAALAFCFFLLKGQSIFVALWCLV 69

Query: 61  LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
           LN FF KKLFKGTV KE+V ++ NFGVQLETH+R
Sbjct: 70  LNVFFGKKLFKGTVEKETVMVLPNFGVQLETHFR 103

[Close]

BLAST of MC08g1475 vs. NCBI nr
Match: XP_022158295.1 (uncharacterized protein LOC111024811 isoform X3 [Momordica charantia])

HSP 1 Score: 136 bits (342), Expect = 2.28e-38
Identity = 73/94 (77.66%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 1  RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
          RY YF  SK P EAVDIHHVVV RSK  GK FLLCIFAALAF FFLLKDQSIFV+FWCLV
Sbjct: 10 RYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQSIFVVFWCLV 69

Query: 61 LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
          LN FFAKKLF+G V K    +M NFGVQLETHYR
Sbjct: 70 LNVFFAKKLFRGMVEK----VMPNFGVQLETHYR 99

[Close]

BLAST of MC08g1475 vs. ExPASy TrEMBL
Match: A0A6J1DYZ9 (uncharacterized protein LOC111024811 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024811 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 1.18e-43
Identity = 77/94 (81.91%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 1   RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
           RY YF  SK P EAVDIHHVVV RSK  GK FLLCIFAALAF FFLLKDQSIFV+FWCLV
Sbjct: 10  RYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQSIFVVFWCLV 69

Query: 61  LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
           LN FFAKKLF+G V KESVT+M NFGVQLETHYR
Sbjct: 70  LNVFFAKKLFRGMVEKESVTVMPNFGVQLETHYR 103

[Close]

BLAST of MC08g1475 vs. ExPASy TrEMBL
Match: A0A6J1DVP3 (uncharacterized protein LOC111024811 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024811 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 1.22e-43
Identity = 77/94 (81.91%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 1   RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
           RY YF  SK P EAVDIHHVVV RSK  GK FLLCIFAALAF FFLLKDQSIFV+FWCLV
Sbjct: 10  RYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQSIFVVFWCLV 69

Query: 61  LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
           LN FFAKKLF+G V KESVT+M NFGVQLETHYR
Sbjct: 70  LNVFFAKKLFRGMVEKESVTVMPNFGVQLETHYR 103

[Close]

BLAST of MC08g1475 vs. ExPASy TrEMBL
Match: A0A6J1CVY4 (uncharacterized protein LOC111014789 OS=Momordica charantia OX=3673 GN=LOC111014789 PE=3 SV=1)

HSP 1 Score: 144 bits (364), Expect = 3.65e-42
Identity = 76/94 (80.85%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 1   RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
           RY YF  SKWP EAVDIHHVV LRSK  GK FLLCIFAALAF F LLKDQSIFV+FWCLV
Sbjct: 10  RYGYFRDSKWPSEAVDIHHVV-LRSKGGGKGFLLCIFAALAFCFLLLKDQSIFVVFWCLV 69

Query: 61  LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
           LN FFAKKLF+ TV KESV +M NFGVQLETHYR
Sbjct: 70  LNVFFAKKLFRETVEKESVMVMPNFGVQLETHYR 102

[Close]

BLAST of MC08g1475 vs. ExPASy TrEMBL
Match: A0A6J1DVF9 (uncharacterized protein LOC111024811 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111024811 PE=3 SV=1)

HSP 1 Score: 136 bits (342), Expect = 1.11e-38
Identity = 73/94 (77.66%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 1  RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
          RY YF  SK P EAVDIHHVVV RSK  GK FLLCIFAALAF FFLLKDQSIFV+FWCLV
Sbjct: 10 RYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQSIFVVFWCLV 69

Query: 61 LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHYR 94
          LN FFAKKLF+G V K    +M NFGVQLETHYR
Sbjct: 70 LNVFFAKKLFRGMVEK----VMPNFGVQLETHYR 99

[Close]

BLAST of MC08g1475 vs. ExPASy TrEMBL
Match: A0A6J1I1U0 (uncharacterized protein LOC111470129 OS=Cucurbita maxima OX=3661 GN=LOC111470129 PE=3 SV=1)

HSP 1 Score: 134 bits (338), Expect = 4.47e-38
Identity = 69/93 (74.19%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 1   RYIYFCHSKWPFEAVDIHHVVVLRSKSDGKSFLLCIFAALAFYFFLLKDQSIFVIFWCLV 60
           RY YF  SKW  EAVDIHHVVVLR++S+GK FL  I AALAF FF+LK QSIFV+ WC V
Sbjct: 10  RYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQSIFVVLWCWV 69

Query: 61  LNRFFAKKLFKGTVAKESVTIMQNFGVQLETHY 93
           LN  FAKKLFKGTV KESV +M NFGVQLETHY
Sbjct: 70  LNVLFAKKLFKGTVEKESVMVMPNFGVQLETHY 102

[Close]

BLAST of MC08g1475 vs. TAIR 10
Match: AT4G35530.1 (phosphatidylinositolglycan-related )

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08
Identity = 38/98 (38.78%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 2   YIYFCHSKWPFEAVDIHHVVVLRSKSDGKS------FLLCIFAALAFYFFLLKDQSIFVI 61
           YI+   SK   EA+DIHHV++  S   G +      F L +F A + YF L KD     +
Sbjct: 13  YIHESGSKSTREAIDIHHVIINGSSGTGYARRWGLGFFL-VFLASSMYFLLGKDNPARTL 72

Query: 62  FWCLVLNRFFAKKLFKGTVAKESVTIMQNFGVQLETHY 94
            W  +L+ F      +  V KESV I+  FG+QLET Y
Sbjct: 73  SWGCLLSGFLVMLHSRKFVKKESVIILPTFGIQLETQY 109

The following BLAST results are available for this feature:

BLAST of MC08g1475 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1475 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158294.1	2.44e-43	81.91	uncharacterized protein LOC111024811 isoform X2 [Momordica charantia]	[more]
XP_022158291.1	2.52e-43	81.91	uncharacterized protein LOC111024811 isoform X1 [Momordica charantia] >XP_022158...	[more]
XP_022145301.1	7.53e-42	80.85	uncharacterized protein LOC111014789, partial [Momordica charantia]	[more]
XP_038876673.1	9.00e-39	73.40	uncharacterized protein LOC120069067 [Benincasa hispida]	[more]
XP_022158295.1	2.28e-38	77.66	uncharacterized protein LOC111024811 isoform X3 [Momordica charantia]	[more]

BLAST of MC08g1475 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYZ9	1.18e-43	81.91	uncharacterized protein LOC111024811 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DVP3	1.22e-43	81.91	uncharacterized protein LOC111024811 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CVY4	3.65e-42	80.85	uncharacterized protein LOC111014789 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DVF9	1.11e-38	77.66	uncharacterized protein LOC111024811 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1I1U0	4.47e-38	74.19	uncharacterized protein LOC111470129 OS=Cucurbita maxima OX=3661 GN=LOC111470129...	[more]

BLAST of MC08g1475 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35530.1	2.1e-08	38.78	phosphatidylinositolglycan-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15231:SF1	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H	coord: 5..93
IPR044215	Phosphatidylinositol N-acetylglucosaminyltransferase subunit H	PANTHER	PTHR15231	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H	coord: 5..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1475.1	MC08g1475.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006506	GPI anchor biosynthetic process
cellular_component	GO:0000506	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0017176	phosphatidylinositol N-acetylglucosaminyltransferase activity