MC08g1470 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g1470
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 18968084 .. 18968296 (+)
RNA-Seq ExpressionMC08g1470
SyntenyMC08g1470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTCCTTTTTGTTGGGGAATGATTTTCTAGTCTGGGCTCCTAATCCCTCCAAGTGGTTTTTCAGTAGCTTTTTCTTCCATTTGTTGAGTTCTACTTCTCTTCACCCTTTTTTCCCGTTGTTTGCCTTGCTTTGGAAGGTCAAAATTCCAGAAAAAATGAAGTTCTTTGGGATGCAGATCTTACATGGGAAAGTCAATACATTGGATCGTATC

mRNA sequence

TGTTCCTTTTTGTTGGGGAATGATTTTCTAGTCTGGGCTCCTAATCCCTCCAAGTGGTTTTTCAGTAGCTTTTTCTTCCATTTGTTGAGTTCTACTTCTCTTCACCCTTTTTTCCCGTTGTTTGCCTTGCTTTGGAAGGTCAAAATTCCAGAAAAAATGAAGTTCTTTGGGATGCAGATCTTACATGGGAAAGTCAATACATTGGATCGTATC

Coding sequence (CDS)

TGTTCCTTTTTGTTGGGGAATGATTTTCTAGTCTGGGCTCCTAATCCCTCCAAGTGGTTTTTCAGTAGCTTTTTCTTCCATTTGTTGAGTTCTACTTCTCTTCACCCTTTTTTCCCGTTGTTTGCCTTGCTTTGGAAGGTCAAAATTCCAGAAAAAATGAAGTTCTTTGGGATGCAGATCTTACATGGGAAAGTCAATACATTGGATCGTATC

Protein sequence

CSFLLGNDFLVWAPNPSKWFFSSFFFHLLSSTSLHPFFPLFALLWKVKIPEKMKFFGMQILHGKVNTLDRI
Homology
[Close]
BLAST of MC08g1470 vs. NCBI nr
Match: XP_022151711.1 (uncharacterized protein LOC111019624 [Momordica charantia])

HSP 1 Score: 48.1 bits (113), Expect = 3.57e-04
Identity = 30/70 (42.86%), Postives = 34/70 (48.57%), Query Frame = 0 

Query: 7   NDFLVWAPNPSKWFFSSFFFHLLSSTSLHPFF-------------PLFALLWKVKIPEKM 63
            D  VW PNP   F  S FF +L S S   F              P F  LWK+KIP+K+
Sbjct: 385 EDVRVWIPNPLGGFSCSSFFQVLISPSSSSFLASLSSSSSPSLVTPWFTSLWKIKIPKKI 444

[Close]
BLAST of MC08g1470 vs. ExPASy TrEMBL
Match: A0A6J1DFI2 (uncharacterized protein LOC111019624 OS=Momordica charantia OX=3673 GN=LOC111019624 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.73e-04
Identity = 30/70 (42.86%), Postives = 34/70 (48.57%), Query Frame = 0 

Query: 7   NDFLVWAPNPSKWFFSSFFFHLLSSTSLHPFF-------------PLFALLWKVKIPEKM 63
            D  VW PNP   F  S FF +L S S   F              P F  LWK+KIP+K+
Sbjct: 385 EDVRVWIPNPLGGFSCSSFFQVLISPSSSSFLASLSSSSSPSLVTPWFTSLWKIKIPKKI 444

The following BLAST results are available for this feature:
BLAST of MC08g1470 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g1470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151711.13.57e-0442.86uncharacterized protein LOC111019624 [Momordica charantia][more]
BLAST of MC08g1470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DFI21.73e-0442.86uncharacterized protein LOC111019624 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
BLAST of MC08g1470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g1470.1MC08g1470.1mRNA