MC08g1389 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1389
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 13796404 .. 13796586 (+)
RNA-Seq Expression	MC08g1389
Synteny	MC08g1389

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGTGAAGAAGATGCTATGGAAATAGCCCTCGGGAAAAGATCATCATACAATAAAGGGATGGGATATGGTCCGAAGCCACCCAATAAAAAAGCGTCGGCAGGATGCTCACAAGAATACGTTCTCACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTACGAAGCCAACGAGAGGAA

mRNA sequence

TTAAGTGAAGAAGATGCTATGGAAATAGCCCTCGGGAAAAGATCATCATACAATAAAGGGATGGGATATGGTCCGAAGCCACCCAATAAAAAAGCGTCGGCAGGATGCTCACAAGAATACGTTCTCACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTACGAAGCCAACGAGAGGAA

Coding sequence (CDS)

TTAAGTGAAGAAGATGCTATGGAAATAGCCCTCGGGAAAAGATCATCATACAATAAAGGGATGGGATATGGTCCGAAGCCACCCAATAAAAAAGCGTCGGCAGGATGCTCACAAGAATACGTTCTCACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTACGAAGCCAACGAGAGGAA

Protein sequence

LSEEDAMEIALGKRSSYNKGMGYGPKPPNKKASAGCSQEYVLTLEARVARNEELLRSQREE

Homology

[Close]

BLAST of MC08g1389 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 57.8 bits (138), Expect = 4.86e-08
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 2   SEEDAMEIALGKRSSYNKGMGYGPKPP-NKKASAGCSQEYVLTLEARVARNEE 53
           +EE+ ME  LGKRS+Y  GMGYGPKP  NK +S+  S EYV +LEAR+ ++EE
Sbjct: 122 TEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEE 174

[Close]

BLAST of MC08g1389 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 57.8 bits (138), Expect = 6.70e-08
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 2   SEEDAMEIALGKRSSYNKGMGYGPKPP-NKKASAGCSQEYVLTLEARVARNEE 53
           +EE+ ME  LGKRS+Y  GMGYGPKP  NK +S+  S EYV +LEAR+ ++EE
Sbjct: 127 TEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEE 179

[Close]

BLAST of MC08g1389 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.35e-08
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 2   SEEDAMEIALGKRSSYNKGMGYGPKPP-NKKASAGCSQEYVLTLEARVARNEE 53
           +EE+ ME  LGKRS+Y  GMGYGPKP  NK +S+  S EYV +LEAR+ ++EE
Sbjct: 122 TEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEE 174

[Close]

BLAST of MC08g1389 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.24e-08
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 2   SEEDAMEIALGKRSSYNKGMGYGPKPP-NKKASAGCSQEYVLTLEARVARNEE 53
           +EE+ ME  LGKRS+Y  GMGYGPKP  NK +S+  S EYV +LEAR+ ++EE
Sbjct: 127 TEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEE 179

[Close]

BLAST of MC08g1389 vs. ExPASy TrEMBL
Match: A0A5A7TNG7 (Cytochrome P450 CYP82D47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00260 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.22e-04
Identity = 19/37 (51.35%), Postives = 29/37 (78.38%), Query Frame = 0


Query: 1  LSEEDAMEIALGKRSSYNKGMGYGPKPPNKKASAGCS 37
          LS ++  +  LG+RSSY+KG+G+GPKP ++K+SA  S
Sbjct: 49 LSGDEIYKTILGRRSSYSKGLGWGPKPKSRKSSASSS 85

The following BLAST results are available for this feature:

BLAST of MC08g1389 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1389 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143616.1	4.86e-08	58.49	uncharacterized protein LOC111013476 [Momordica charantia]	[more]
XP_022148911.1	6.70e-08	58.49	uncharacterized protein LOC111017461 [Momordica charantia]	[more]

BLAST of MC08g1389 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQT5	2.35e-08	58.49	uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1D6S9	3.24e-08	58.49	uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7TNG7	9.22e-04	51.35	Cytochrome P450 CYP82D47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of MC08g1389 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 41..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1389.1	MC08g1389.1	mRNA