MC08g1363 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1363
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pentatricopeptide repeat-containing protein
Location	MC08: 13089133 .. 13091160 (-)
RNA-Seq Expression	MC08g1363
Synteny	MC08g1363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCAATGCAATTAGAATCAACTTCACCCTTTTCTTCCGCCATCCCCTTGTTTCTTCTGGGAACCAGAAATCACGCCCCAATACGCCTCAACAAGATCAAACGAAAGCCCACAACTCCAATTATAATCCTCAGAGCCTCAGCTTCTTCGAAATCAAAAGATGTATGGAGAAGAAGAACCCCGTCTGGAGATTCAACGGCATCGCCATTTCCCCAAAAGTACCAACGCAGCGCGAGAAGGCAGCGAGAGCCCCCGCATTTGGACCACAGCGTCGACATGGACGAGCTTTTATCGTCAATTGGGCAGACGAAGAACGAACAGGAGCTGTACTCGGTGCTGTCCCCGTATAAAGGGCGCCAGCTTTCGATCCGGTTCATGGTATCGCTTCTGTCGCGCGAACCGGACTGGCAACGGTCGCTCGCGATTCTTGATTGGGTCAACGAAGAGGCTCTTTACACGCCCTCGGTGTTCGCTTACAATGTTGTTATCCGCAATGTACTGCGCGCGAAGCAGTGGGAGATTGCACACGGCCTGTTCGACGAAATGCGCCAGAGAGCTCTTGCGGCTGATAGGTATACTTATTCCACTCTCATCACTTGTTTTGGGAAAGAGGGGTTGTTTGATGCTGCCCTCTATTGGCTTCAGCAAATGGAGCAAGATCGGGTCTCAGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCAAAGGCCATTTCCATTTTTTCAAGATTAAAGAGATCCGGGATTACTCCAGATATTGTAGCCTATAATTCCATGATAAATGTGTTTGGAAAAGCTAAGCTTTTCAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGGGCTGTGGGTGTTGTGCCGGATACTGTTAGCTACTCGACTTTACTCAGTATGTTTGTTGAGAATGAGAAGTTTTTGGAGGCTCTGTCTGTGTATTCTGAGATGATGGAGGTCAACTGCCCGCTTGATCTTACTACTTGTAATGTTATGATTGATGTTTATGGTCAGCTGGATATGGTGAAGGAGGCTGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAGCCGAATGTTGTGAGTTATAATACCATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTCGGGGAAGCGATACACCTTTTCCGCTTGATGCAGAGGAAGGAGATTGAGCAGAATGTGGTGACATATAACACCATGATCAAGATATATGGGAAGTCTCTGGAGCATGAAAAGGCAACGAATCTTGTGCAAGAGATGCAAAATAGAGGGATTGAACCGAACGCGATTACATACTCGACAATAATTTCGATATGGGGGAAAGCAGGAAAGTTGGAGAGAGCTGCAATGCTGTTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTTCTTTACCAGACCATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCACGCCAAGCGTTTGCTTCACGAGCTGAAGCAACCAGACAACATTCCGAGGAAGACAGCAATTACCATTCTCGCTAGAGCTGGTCGAATCGAAGAAGCGACATGGGTTTTTCGACAGGCGTTCGATGCAGGAGAGTTGAAGGACATATCCATTTTTGGGTGCATGATTGATCTGTTTTCGAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAATGCTTATGGGAAGTTGAGGGATTTTGACAAGGCTGATGCTGTGTACATGGAGATGCAGGAAGAGGGCTGTGTTTTTTCCGACGAAGTACACTTCCAGATGCTCGGTCTCTACGGCGCAAGAAAGGATTACAAGAGATTGGACTCGTTGTTCGAAAGGCTCGACTCTGATCCCAATATAAATAAGAAGGAATTGCATCTCGTTGTTGCGAGCATTTACGAAAGGGCTAACAGACTTAACGATGCATCTCGGATTATGAGCAGGATGAACGAAATGGCAATCTCGAGATCA

mRNA sequence

TCTTCAATGCAATTAGAATCAACTTCACCCTTTTCTTCCGCCATCCCCTTGTTTCTTCTGGGAACCAGAAATCACGCCCCAATACGCCTCAACAAGATCAAACGAAAGCCCACAACTCCAATTATAATCCTCAGAGCCTCAGCTTCTTCGAAATCAAAAGATGTATGGAGAAGAAGAACCCCGTCTGGAGATTCAACGGCATCGCCATTTCCCCAAAAGTACCAACGCAGCGCGAGAAGGCAGCGAGAGCCCCCGCATTTGGACCACAGCGTCGACATGGACGAGCTTTTATCGTCAATTGGGCAGACGAAGAACGAACAGGAGCTGTACTCGGTGCTGTCCCCGTATAAAGGGCGCCAGCTTTCGATCCGGTTCATGGTATCGCTTCTGTCGCGCGAACCGGACTGGCAACGGTCGCTCGCGATTCTTGATTGGGTCAACGAAGAGGCTCTTTACACGCCCTCGGTGTTCGCTTACAATGTTGTTATCCGCAATGTACTGCGCGCGAAGCAGTGGGAGATTGCACACGGCCTGTTCGACGAAATGCGCCAGAGAGCTCTTGCGGCTGATAGGTATACTTATTCCACTCTCATCACTTGTTTTGGGAAAGAGGGGTTGTTTGATGCTGCCCTCTATTGGCTTCAGCAAATGGAGCAAGATCGGGTCTCAGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCAAAGGCCATTTCCATTTTTTCAAGATTAAAGAGATCCGGGATTACTCCAGATATTGTAGCCTATAATTCCATGATAAATGTGTTTGGAAAAGCTAAGCTTTTCAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGGGCTGTGGGTGTTGTGCCGGATACTGTTAGCTACTCGACTTTACTCAGTATGTTTGTTGAGAATGAGAAGTTTTTGGAGGCTCTGTCTGTGTATTCTGAGATGATGGAGGTCAACTGCCCGCTTGATCTTACTACTTGTAATGTTATGATTGATGTTTATGGTCAGCTGGATATGGTGAAGGAGGCTGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAGCCGAATGTTGTGAGTTATAATACCATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTCGGGGAAGCGATACACCTTTTCCGCTTGATGCAGAGGAAGGAGATTGAGCAGAATGTGGTGACATATAACACCATGATCAAGATATATGGGAAGTCTCTGGAGCATGAAAAGGCAACGAATCTTGTGCAAGAGATGCAAAATAGAGGGATTGAACCGAACGCGATTACATACTCGACAATAATTTCGATATGGGGGAAAGCAGGAAAGTTGGAGAGAGCTGCAATGCTGTTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTTCTTTACCAGACCATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCACGCCAAGCGTTTGCTTCACGAGCTGAAGCAACCAGACAACATTCCGAGGAAGACAGCAATTACCATTCTCGCTAGAGCTGGTCGAATCGAAGAAGCGACATGGGTTTTTCGACAGGCGTTCGATGCAGGAGAGTTGAAGGACATATCCATTTTTGGGTGCATGATTGATCTGTTTTCGAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAATGCTTATGGGAAGTTGAGGGATTTTGACAAGGCTGATGCTGTGTACATGGAGATGCAGGAAGAGGGCTGTGTTTTTTCCGACGAAGTACACTTCCAGATGCTCGGTCTCTACGGCGCAAGAAAGGATTACAAGAGATTGGACTCGTTGTTCGAAAGGCTCGACTCTGATCCCAATATAAATAAGAAGGAATTGCATCTCGTTGTTGCGAGCATTTACGAAAGGGCTAACAGACTTAACGATGCATCTCGGATTATGAGCAGGATGAACGAAATGGCAATCTCGAGATCA

Coding sequence (CDS)

TCTTCAATGCAATTAGAATCAACTTCACCCTTTTCTTCCGCCATCCCCTTGTTTCTTCTGGGAACCAGAAATCACGCCCCAATACGCCTCAACAAGATCAAACGAAAGCCCACAACTCCAATTATAATCCTCAGAGCCTCAGCTTCTTCGAAATCAAAAGATGTATGGAGAAGAAGAACCCCGTCTGGAGATTCAACGGCATCGCCATTTCCCCAAAAGTACCAACGCAGCGCGAGAAGGCAGCGAGAGCCCCCGCATTTGGACCACAGCGTCGACATGGACGAGCTTTTATCGTCAATTGGGCAGACGAAGAACGAACAGGAGCTGTACTCGGTGCTGTCCCCGTATAAAGGGCGCCAGCTTTCGATCCGGTTCATGGTATCGCTTCTGTCGCGCGAACCGGACTGGCAACGGTCGCTCGCGATTCTTGATTGGGTCAACGAAGAGGCTCTTTACACGCCCTCGGTGTTCGCTTACAATGTTGTTATCCGCAATGTACTGCGCGCGAAGCAGTGGGAGATTGCACACGGCCTGTTCGACGAAATGCGCCAGAGAGCTCTTGCGGCTGATAGGTATACTTATTCCACTCTCATCACTTGTTTTGGGAAAGAGGGGTTGTTTGATGCTGCCCTCTATTGGCTTCAGCAAATGGAGCAAGATCGGGTCTCAGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCAAAGGCCATTTCCATTTTTTCAAGATTAAAGAGATCCGGGATTACTCCAGATATTGTAGCCTATAATTCCATGATAAATGTGTTTGGAAAAGCTAAGCTTTTCAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGGGCTGTGGGTGTTGTGCCGGATACTGTTAGCTACTCGACTTTACTCAGTATGTTTGTTGAGAATGAGAAGTTTTTGGAGGCTCTGTCTGTGTATTCTGAGATGATGGAGGTCAACTGCCCGCTTGATCTTACTACTTGTAATGTTATGATTGATGTTTATGGTCAGCTGGATATGGTGAAGGAGGCTGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAGCCGAATGTTGTGAGTTATAATACCATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTCGGGGAAGCGATACACCTTTTCCGCTTGATGCAGAGGAAGGAGATTGAGCAGAATGTGGTGACATATAACACCATGATCAAGATATATGGGAAGTCTCTGGAGCATGAAAAGGCAACGAATCTTGTGCAAGAGATGCAAAATAGAGGGATTGAACCGAACGCGATTACATACTCGACAATAATTTCGATATGGGGGAAAGCAGGAAAGTTGGAGAGAGCTGCAATGCTGTTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTTCTTTACCAGACCATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCACGCCAAGCGTTTGCTTCACGAGCTGAAGCAACCAGACAACATTCCGAGGAAGACAGCAATTACCATTCTCGCTAGAGCTGGTCGAATCGAAGAAGCGACATGGGTTTTTCGACAGGCGTTCGATGCAGGAGAGTTGAAGGACATATCCATTTTTGGGTGCATGATTGATCTGTTTTCGAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAATGCTTATGGGAAGTTGAGGGATTTTGACAAGGCTGATGCTGTGTACATGGAGATGCAGGAAGAGGGCTGTGTTTTTTCCGACGAAGTACACTTCCAGATGCTCGGTCTCTACGGCGCAAGAAAGGATTACAAGAGATTGGACTCGTTGTTCGAAAGGCTCGACTCTGATCCCAATATAAATAAGAAGGAATTGCATCTCGTTGTTGCGAGCATTTACGAAAGGGCTAACAGACTTAACGATGCATCTCGGATTATGAGCAGGATGAACGAAATGGCAATCTCGAGATCA

Protein sequence

SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRTPSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQLSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFDEMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYSTLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQEEGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLNDASRIMSRMNEMAISRS

Homology

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BLAST of MC08g1363 vs. ExPASy Swiss-Prot
Match: Q9FLD8 (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g39980 PE=2 SV=1)

HSP 1 Score: 1003.4 bits (2593), Expect = 1.2e-291
Identity = 515/677 (76.07%), Postives = 596/677 (88.04%), Query Frame = 0


Query: 3   MQLESTSPFSSAIPLFLLGTRNH--APIRLNKI-KRKPTTPIIILRASASSKS---KDVW 62
           M +E  S  S ++PL  L TR H    I  + I + +    I  + AS+SS+S   K VW
Sbjct: 1   MYIEIASSSSLSLPLLPL-TRPHIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVW 60

Query: 63  RRRTPSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPY 122
           R++ P  ++T+S    +  R  RR +    LDH+VDMDELL+SI QT+NE+EL+S+LS Y
Sbjct: 61  RKQ-PEKNTTSS---FQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTY 120

Query: 123 KGRQLSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAH 182
           K RQLSIRFMVSLLSRE DWQRSLA+LDWV+EEA YTPSVFAYNVV+RNVLRAKQ++IAH
Sbjct: 121 KDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAH 180

Query: 183 GLFDEMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELS 242
           GLFDEMRQRALA DRYTYSTLIT FGKEG+FD+AL WLQ+MEQDRVSGDLVLYSNLIELS
Sbjct: 181 GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELS 240

Query: 243 RKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDT 302
           R+LCDYSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM   GV+P+T
Sbjct: 241 RRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 300

Query: 303 VSYSTLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWS 362
           VSYSTLLS++VEN KFLEALSV++EM EVNC LDLTTCN+MIDVYGQLDMVKEADRLFWS
Sbjct: 301 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 360

Query: 363 MRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 422
           +RKM IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++E
Sbjct: 361 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 420

Query: 423 HEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQT 482
           HEKATNLVQEMQ+RGIEPNAITYSTIISIWGKAGKL+RAA LFQKLRSSG EIDQVLYQT
Sbjct: 421 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 480

Query: 483 MIVAYERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKD 542
           MIVAYER GL+ HAKRLLHELK PDNIPR+TAITILA+AGR EEATWVFRQAF++GE+KD
Sbjct: 481 MIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 540

Query: 543 ISIFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYM 602
           IS+FGCMI+L+SRN+++ NV+EVFEKMR+ G+FP+SNVIA+VLNAYGK R+F+KAD VY 
Sbjct: 541 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYR 600

Query: 603 EMQEEGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERAN 662
           EMQEEGCVF DEVHFQML LY ++KD++ ++SLF+RL+SDPN+N KELHLVVA++YERA+
Sbjct: 601 EMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERAD 660

Query: 663 RLNDASRIMSRMNEMAI 674
           +LNDASR+M+RM E  I
Sbjct: 661 KLNDASRVMNRMRERGI 672

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BLAST of MC08g1363 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.2e-52
Identity = 135/571 (23.64%), Postives = 271/571 (47.46%), Query Frame = 0


Query: 89  HSVDMDELLSSIGQTKNEQELYSVLSPYKGRQLSIR---FMVSLLSREPDWQRSLAILDW 148
           +S D++ L++ +        +   L  +K + LS+     +    +   DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 149 VNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFDEMRQRALAADRYTYSTLITCFGKEG 208
           +  +    P+   Y ++I  + R    +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 209 LFDAALYWLQQMEQDRVSGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 268
            ++ +L  L +M+ +++S  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 269 NSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYSTLLSMFVENEKFLEALSVYSEMME 328
           N++++      L  EA  + + M   G+VPD  +YS L+  F +  +  +   +  EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 329 VNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGE 388
                D+T+ NV+++ Y +   +KEA  +F  M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 389 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIIS 448
              LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 449 IWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAK---RLLHELKQPD 508
             GK G  E A  + Q + ++        Y  +I A+ +A L   A      +HE+    
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 509 NIPR-KTAITILARAGRIEEATWVFRQAFDAGELKDISIFGCMIDLFSRNKKHKNVVEVF 568
           +I    + +   AR G ++E+  +  +  D+G  ++   F   I+ + +  K +  V+ +
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 569 EKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQEEGCVFSDEVHFQMLGLYGAR 628
             M      P+   +  VL+ Y   R  D+    + EM+    + S   +  ML +YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 629 KDYKRLDSLFERLDSDPNINKKELHLVVASI 652
           + +  ++ L E + S+   N   +H V+  +
Sbjct: 612 ERWDDVNELLEEMLSNRVSN---IHQVIGQM 638

[Close]

BLAST of MC08g1363 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 7.5e-52
Identity = 137/454 (30.18%), Postives = 239/454 (52.64%), Query Frame = 0


Query: 152 YTPSVFAYNVVIRNVLRAKQWEIAHGLFDEMRQRALAADRYTYSTLITCFGKEGLFDAAL 211
           Y P+   +N +I  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 212 YWLQQMEQDRVSGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNSMI 271
             L++ME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 272 NVFGKAKLFREARFLLKEMRAVGVVPDTVSYSTLLSMFVENEKFLEALSVYSEMMEVNCP 331
                   + +A  LL +M    + P+ V++S L+  FV+  K +EA  +Y EM++ +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 332 LDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 391
            D+ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 392 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGK 451
           FR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 452 AGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----QPDNIP 511
            GKLE+A ++F+ L+ S  E D   Y  MI    +AG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 512 RKTAITILARAGRIEEATWVFRQAFDAGELKDISIFGCMIDLFSRNKKHKNVVEVFEKMR 571
             T I+   R G  EEA  +FR+  + G L +   +  +I    R+       E+ ++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 572 SVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEM 599
           S G   +++ I++V+N    L D  + +  Y+EM
Sbjct: 601 SCGFVGDASTISMVIN---MLHD-GRLEKSYLEM 627

[Close]

BLAST of MC08g1363 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.5e-49
Identity = 128/446 (28.70%), Postives = 230/446 (51.57%), Query Frame = 0


Query: 139 SLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFDEMRQRALAADRYTYSTLI 198
           ++A++D + E   Y P  F +  +I  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 199 TCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 258
               K G  D AL  L++ME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 259 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYSTLLSMFVENEKFLEALSV 318
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 319 YSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 378
           Y EM++ +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 379 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 438
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 439 YSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 498
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    +AG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 499 ----QPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIFGCMIDLFSRNKKHK 558
                P+ I   T I+   R G  EEA  + ++  + G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 559 NVVEVFEKMRSVGHFPNSNVIALVLN 581
              E+ ++MRS G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]

BLAST of MC08g1363 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.3e-48
Identity = 131/519 (25.24%), Postives = 250/519 (48.17%), Query Frame = 0


Query: 170 KQWEIAHGLFD-EMRQRALAA--DRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDL 229
           K++++A   FD  M+Q+   +  D    + +I+  GKEG   +A      +++D  S D+
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208

Query: 230 VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGK-AKLFREARFLLK 289
             Y++LI        Y +A+++F +++  G  P ++ YN ++NVFGK    + +   L++
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268

Query: 290 EMRAVGVVPDTVSYSTLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLD 349
           +M++ G+ PD  +Y+TL++         EA  V+ EM       D  T N ++DVYG+  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328

Query: 350 MVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 409
             KEA ++   M   G  P++V+YN+++  Y    +  EA+ L   M  K  + +V TY 
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 410 TMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS 469
           T++  + ++ + E A ++ +EM+N G +PN  T++  I ++G  GK      +F ++   
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448

Query: 470 GAEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNIPRK----TAITILARAGRIEEA 529
           G   D V + T++  + + G+ +    +  E+K+   +P +    T I+  +R G  E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 530 TWVFRQAFDAGELKDISIFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNA 589
             V+R+  DAG   D+S +  ++   +R    +   +V  +M      PN      +L+A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 590 YGKLRDFDKADAVYMEMQEEGCVFSDEVHFQMLGLYGARKDY----KRLDSLFERLDSDP 649
           Y   ++     ++  E+   G +    V  + L L  ++ D     +R  S  +     P
Sbjct: 569 YANGKEIGLMHSLAEEVY-SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 628

Query: 650 NINKKELHLVVASIYERANRLNDASRIMSRMNEMAISRS 677
           +I        + SIY R   +  A+ ++  M E   + S
Sbjct: 629 DITTLN---SMVSIYGRRQMVAKANGVLDYMKERGFTPS 663

[Close]

BLAST of MC08g1363 vs. NCBI nr
Match: XP_022157661.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Momordica charantia])

HSP 1 Score: 1330 bits (3442), Expect = 0.0
Identity = 676/676 (100.00%), Postives = 676/676 (100.00%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT
Sbjct: 9   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 68

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
           PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ
Sbjct: 69  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 128

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD
Sbjct: 129 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 188

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 248

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 308

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF
Sbjct: 489 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 548

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 609 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 668

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIMSRMNEMAISRS
Sbjct: 669 ASRIMSRMNEMAISRS 684

[Close]

BLAST of MC08g1363 vs. NCBI nr
Match: XP_008443439.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucumis melo] >KAA0053737.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25666.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1214 bits (3142), Expect = 0.0
Identity = 614/676 (90.83%), Postives = 644/676 (95.27%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SS+QL+ST  FSS IPLFL+ TR++  IR NKIK KP T I I RAS+SS SKD+WRR+T
Sbjct: 4   SSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKT 63

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
           PS  ST +  PQKYQRSARRQRE  HLDHS+DMDELL+SIGQTKNEQELYSVLSPYKGRQ
Sbjct: 64  PSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQ 123

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LS+RFMVSLLSRE DWQRSLAILDW+NEEALYTPSV+AYNVV+RNVLRAKQWE+AHGLFD
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV V+PDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLL+MFVENEKFLEALSV+SEM EVNCPLDLTTCN+MIDVYGQLDMVKEADRLFW MRKM
Sbjct: 304 TLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVA 483

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YE+AGLVAHAKRLLHELKQPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDIS+F
Sbjct: 484 YEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE
Sbjct: 544 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQE 603

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           +GC+F DEVHFQML LYGARKDYKRL+SLFERLDSDPNINKKELHLVVASIYER NRLN+
Sbjct: 604 KGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNN 663

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIM+RMNE AISRS
Sbjct: 664 ASRIMNRMNETAISRS 679

[Close]

BLAST of MC08g1363 vs. NCBI nr
Match: XP_023521621.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023527980.1 pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1212 bits (3137), Expect = 0.0
Identity = 612/676 (90.53%), Postives = 645/676 (95.41%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SSMQL+STS FSS + L L+ TRN+  + L++ K KP   I + RAS+SS SKDVWRR+T
Sbjct: 10  SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISVPRASSSSTSKDVWRRKT 69

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
           PS  ST +PFPQKY+RSARRQRE  HLDHSVDMDELL+SIGQTKNEQELYS+LSPYKGRQ
Sbjct: 70  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 129

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LS+RFMVS+LSRE DWQRSLAILDW+NEEALYTPSVFAYNVV+RNVLRAKQWE+AHGLFD
Sbjct: 130 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 189

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 190 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 249

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV VVPDTVSYS
Sbjct: 250 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 309

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLLSMFVENEKFLEALSV+SEM EVNCPL+LTTCN+MIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 310 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 369

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 370 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 429

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 430 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 489

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YERAGLVAHAKRL+ ELKQPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELKDIS+F
Sbjct: 490 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 549

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFDKADAVY EMQE
Sbjct: 550 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYTEMQE 609

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           EGCVF DEVHFQML LYGARKDYKRL+ LFERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 610 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLND 669

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIM+RMNEM+ISRS
Sbjct: 670 ASRIMNRMNEMSISRS 685

[Close]

BLAST of MC08g1363 vs. NCBI nr
Match: XP_022934402.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1211 bits (3132), Expect = 0.0
Identity = 611/676 (90.38%), Postives = 645/676 (95.41%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SSMQL+STS FSS + L L+ TRN+  + L++ K KP   I I RAS+SS SKD+WRR+T
Sbjct: 9   SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
            S  ST +PFPQKY+RSARRQRE  HLDHSVDMDELL+SIGQTKNEQELYS+LSPYKGRQ
Sbjct: 69  SSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LS+RFMVS+LSRE DWQRSLAILDW+NEEALYTPSVFAYNVV+RNVLRAKQWE+AHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+M+QDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNLIELSRKLC 248

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV VVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLLSMFVENEKFLEALSV+SEM EVNCPL+LTTCN+MIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YERAGLVAHAKRL+ ELKQPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELKDIS+F
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           EGCVF DEVHFQML LYGARKDYKRL+ LFERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 609 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLND 668

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIM+RMNEM+ISRS
Sbjct: 669 ASRIMNRMNEMSISRS 684

[Close]

BLAST of MC08g1363 vs. NCBI nr
Match: KAG6580983.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1211 bits (3132), Expect = 0.0
Identity = 611/676 (90.38%), Postives = 645/676 (95.41%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SSMQL+STS FSS + L L+ TRN+  + L++ K KP   I I RAS+SS SKD+WRR+T
Sbjct: 9   SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
           PS  STA+PFPQKY+RSARRQRE  HLDHSVDMDELL+SIGQTKNEQELYS+LSPYKGRQ
Sbjct: 69  PSEKSTATPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LS+RFMVS+LSRE DWQRSLAILDW+NEEALYTPSVFAYNVV+RNVLRAKQWE+AHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 248

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV VVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLLSMFVENEKFLEALSV+SEM EVNCPL+LTTCN+MIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YERAGLVAHAKRL+ ELKQPDNIPRKTAITILARAGR+EE+TWVFRQAFDAGELKDIS+F
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEESTWVFRQAFDAGELKDISVF 548

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           EGCVF DEVHFQML LY ARKDYKRL+  FERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 609 EGCVFPDEVHFQMLSLYSARKDYKRLEESFERLDSDPNINKKELHLVVASIYERANRLND 668

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIM+RMNEM+ISRS
Sbjct: 669 ASRIMNRMNEMSISRS 684

[Close]

BLAST of MC08g1363 vs. ExPASy TrEMBL
Match: A0A6J1DYU7 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024318 PE=4 SV=1)

HSP 1 Score: 1330 bits (3442), Expect = 0.0
Identity = 676/676 (100.00%), Postives = 676/676 (100.00%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT
Sbjct: 9   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 68

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
           PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ
Sbjct: 69  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 128

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD
Sbjct: 129 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 188

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 248

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 308

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF
Sbjct: 489 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 548

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 609 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 668

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIMSRMNEMAISRS
Sbjct: 669 ASRIMSRMNEMAISRS 684

[Close]

BLAST of MC08g1363 vs. ExPASy TrEMBL
Match: A0A5A7UGV7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008300 PE=4 SV=1)

HSP 1 Score: 1214 bits (3142), Expect = 0.0
Identity = 614/676 (90.83%), Postives = 644/676 (95.27%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SS+QL+ST  FSS IPLFL+ TR++  IR NKIK KP T I I RAS+SS SKD+WRR+T
Sbjct: 4   SSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKT 63

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
           PS  ST +  PQKYQRSARRQRE  HLDHS+DMDELL+SIGQTKNEQELYSVLSPYKGRQ
Sbjct: 64  PSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQ 123

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LS+RFMVSLLSRE DWQRSLAILDW+NEEALYTPSV+AYNVV+RNVLRAKQWE+AHGLFD
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV V+PDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLL+MFVENEKFLEALSV+SEM EVNCPLDLTTCN+MIDVYGQLDMVKEADRLFW MRKM
Sbjct: 304 TLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVA 483

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YE+AGLVAHAKRLLHELKQPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDIS+F
Sbjct: 484 YEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE
Sbjct: 544 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQE 603

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           +GC+F DEVHFQML LYGARKDYKRL+SLFERLDSDPNINKKELHLVVASIYER NRLN+
Sbjct: 604 KGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNN 663

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIM+RMNE AISRS
Sbjct: 664 ASRIMNRMNETAISRS 679

[Close]

BLAST of MC08g1363 vs. ExPASy TrEMBL
Match: A0A1S3B8T9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487030 PE=4 SV=1)

HSP 1 Score: 1214 bits (3142), Expect = 0.0
Identity = 614/676 (90.83%), Postives = 644/676 (95.27%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SS+QL+ST  FSS IPLFL+ TR++  IR NKIK KP T I I RAS+SS SKD+WRR+T
Sbjct: 4   SSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKT 63

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
           PS  ST +  PQKYQRSARRQRE  HLDHS+DMDELL+SIGQTKNEQELYSVLSPYKGRQ
Sbjct: 64  PSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQ 123

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LS+RFMVSLLSRE DWQRSLAILDW+NEEALYTPSV+AYNVV+RNVLRAKQWE+AHGLFD
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV V+PDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLL+MFVENEKFLEALSV+SEM EVNCPLDLTTCN+MIDVYGQLDMVKEADRLFW MRKM
Sbjct: 304 TLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVA 483

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YE+AGLVAHAKRLLHELKQPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDIS+F
Sbjct: 484 YEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE
Sbjct: 544 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQE 603

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           +GC+F DEVHFQML LYGARKDYKRL+SLFERLDSDPNINKKELHLVVASIYER NRLN+
Sbjct: 604 KGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNN 663

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIM+RMNE AISRS
Sbjct: 664 ASRIMNRMNETAISRS 679

[Close]

BLAST of MC08g1363 vs. ExPASy TrEMBL
Match: A0A6J1F2M9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441589 PE=4 SV=1)

HSP 1 Score: 1211 bits (3132), Expect = 0.0
Identity = 611/676 (90.38%), Postives = 645/676 (95.41%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SSMQL+STS FSS + L L+ TRN+  + L++ K KP   I I RAS+SS SKD+WRR+T
Sbjct: 9   SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
            S  ST +PFPQKY+RSARRQRE  HLDHSVDMDELL+SIGQTKNEQELYS+LSPYKGRQ
Sbjct: 69  SSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LS+RFMVS+LSRE DWQRSLAILDW+NEEALYTPSVFAYNVV+RNVLRAKQWE+AHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+M+QDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNLIELSRKLC 248

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV VVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLLSMFVENEKFLEALSV+SEM EVNCPL+LTTCN+MIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YERAGLVAHAKRL+ ELKQPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELKDIS+F
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           EGCVF DEVHFQML LYGARKDYKRL+ LFERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 609 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLND 668

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIM+RMNEM+ISRS
Sbjct: 669 ASRIMNRMNEMSISRS 684

[Close]

BLAST of MC08g1363 vs. ExPASy TrEMBL
Match: A0A6J1J8J4 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482255 PE=4 SV=1)

HSP 1 Score: 1208 bits (3126), Expect = 0.0
Identity = 610/676 (90.24%), Postives = 644/676 (95.27%), Query Frame = 0


Query: 1   SSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRT 60
           SSMQL+STS FSS + L L  TRN+  + L++ K KP   I I RAS+SS SKD+WRR+T
Sbjct: 9   SSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 61  PSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQ 120
           PS  ST +PFPQKY+RSARRQRE  HLDHSVDMDELL+SIGQTKNEQELYS+LSPYKGRQ
Sbjct: 69  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 121 LSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFD 180
           LS+RFMVS+LSRE DWQRSLAILDW+NEEALYTPSVFAYNVV+RNVLRAKQWE+AHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 181 EMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLC 240
           EMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 248

Query: 241 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYS 300
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV VVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 301 TLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 360
           TLLSMFVENEKFLEALSV+SEM EVNCPL+LTTCN+MIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 361 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 420
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 421 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 480
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 481 YERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIF 540
           YERAGLVAHAKRL+ ELKQPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELKDIS+F
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 541 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 600
           GCMIDLFSRNK+HKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 601 EGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLND 660
           +GCVF DEVHFQML LYGARKDYKRL+ LFERLDSDPNINKKELHLVVA IYERANRLND
Sbjct: 609 QGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLND 668

Query: 661 ASRIMSRMNEMAISRS 676
           ASRIM+RMNEM+ISRS
Sbjct: 669 ASRIMNRMNEMSISRS 684

[Close]

BLAST of MC08g1363 vs. TAIR 10
Match: AT5G39980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1003.4 bits (2593), Expect = 8.5e-293
Identity = 515/677 (76.07%), Postives = 596/677 (88.04%), Query Frame = 0


Query: 3   MQLESTSPFSSAIPLFLLGTRNH--APIRLNKI-KRKPTTPIIILRASASSKS---KDVW 62
           M +E  S  S ++PL  L TR H    I  + I + +    I  + AS+SS+S   K VW
Sbjct: 1   MYIEIASSSSLSLPLLPL-TRPHIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVW 60

Query: 63  RRRTPSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPY 122
           R++ P  ++T+S    +  R  RR +    LDH+VDMDELL+SI QT+NE+EL+S+LS Y
Sbjct: 61  RKQ-PEKNTTSS---FQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTY 120

Query: 123 KGRQLSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAH 182
           K RQLSIRFMVSLLSRE DWQRSLA+LDWV+EEA YTPSVFAYNVV+RNVLRAKQ++IAH
Sbjct: 121 KDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAH 180

Query: 183 GLFDEMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELS 242
           GLFDEMRQRALA DRYTYSTLIT FGKEG+FD+AL WLQ+MEQDRVSGDLVLYSNLIELS
Sbjct: 181 GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELS 240

Query: 243 RKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDT 302
           R+LCDYSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM   GV+P+T
Sbjct: 241 RRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 300

Query: 303 VSYSTLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWS 362
           VSYSTLLS++VEN KFLEALSV++EM EVNC LDLTTCN+MIDVYGQLDMVKEADRLFWS
Sbjct: 301 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 360

Query: 363 MRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 422
           +RKM IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++E
Sbjct: 361 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 420

Query: 423 HEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQT 482
           HEKATNLVQEMQ+RGIEPNAITYSTIISIWGKAGKL+RAA LFQKLRSSG EIDQVLYQT
Sbjct: 421 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 480

Query: 483 MIVAYERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKD 542
           MIVAYER GL+ HAKRLLHELK PDNIPR+TAITILA+AGR EEATWVFRQAF++GE+KD
Sbjct: 481 MIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 540

Query: 543 ISIFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYM 602
           IS+FGCMI+L+SRN+++ NV+EVFEKMR+ G+FP+SNVIA+VLNAYGK R+F+KAD VY 
Sbjct: 541 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYR 600

Query: 603 EMQEEGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERAN 662
           EMQEEGCVF DEVHFQML LY ++KD++ ++SLF+RL+SDPN+N KELHLVVA++YERA+
Sbjct: 601 EMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERAD 660

Query: 663 RLNDASRIMSRMNEMAI 674
           +LNDASR+M+RM E  I
Sbjct: 661 KLNDASRVMNRMRERGI 672

[Close]

BLAST of MC08g1363 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 209.5 bits (532), Expect = 8.2e-54
Identity = 135/571 (23.64%), Postives = 271/571 (47.46%), Query Frame = 0


Query: 89  HSVDMDELLSSIGQTKNEQELYSVLSPYKGRQLSIR---FMVSLLSREPDWQRSLAILDW 148
           +S D++ L++ +        +   L  +K + LS+     +    +   DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 149 VNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFDEMRQRALAADRYTYSTLITCFGKEG 208
           +  +    P+   Y ++I  + R    +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 209 LFDAALYWLQQMEQDRVSGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 268
            ++ +L  L +M+ +++S  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 269 NSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYSTLLSMFVENEKFLEALSVYSEMME 328
           N++++      L  EA  + + M   G+VPD  +YS L+  F +  +  +   +  EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 329 VNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGE 388
                D+T+ NV+++ Y +   +KEA  +F  M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 389 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIIS 448
              LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 449 IWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAK---RLLHELKQPD 508
             GK G  E A  + Q + ++        Y  +I A+ +A L   A      +HE+    
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 509 NIPR-KTAITILARAGRIEEATWVFRQAFDAGELKDISIFGCMIDLFSRNKKHKNVVEVF 568
           +I    + +   AR G ++E+  +  +  D+G  ++   F   I+ + +  K +  V+ +
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 569 EKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQEEGCVFSDEVHFQMLGLYGAR 628
             M      P+   +  VL+ Y   R  D+    + EM+    + S   +  ML +YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 629 KDYKRLDSLFERLDSDPNINKKELHLVVASI 652
           + +  ++ L E + S+   N   +H V+  +
Sbjct: 612 ERWDDVNELLEEMLSNRVSN---IHQVIGQM 638

[Close]

BLAST of MC08g1363 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 206.8 bits (525), Expect = 5.3e-53
Identity = 137/454 (30.18%), Postives = 239/454 (52.64%), Query Frame = 0


Query: 152 YTPSVFAYNVVIRNVLRAKQWEIAHGLFDEMRQRALAADRYTYSTLITCFGKEGLFDAAL 211
           Y P+   +N +I  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 212 YWLQQMEQDRVSGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNSMI 271
             L++ME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 272 NVFGKAKLFREARFLLKEMRAVGVVPDTVSYSTLLSMFVENEKFLEALSVYSEMMEVNCP 331
                   + +A  LL +M    + P+ V++S L+  FV+  K +EA  +Y EM++ +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 332 LDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 391
            D+ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 392 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGK 451
           FR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 452 AGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----QPDNIP 511
            GKLE+A ++F+ L+ S  E D   Y  MI    +AG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 512 RKTAITILARAGRIEEATWVFRQAFDAGELKDISIFGCMIDLFSRNKKHKNVVEVFEKMR 571
             T I+   R G  EEA  +FR+  + G L +   +  +I    R+       E+ ++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 572 SVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEM 599
           S G   +++ I++V+N    L D  + +  Y+EM
Sbjct: 601 SCGFVGDASTISMVIN---MLHD-GRLEKSYLEM 627

[Close]

BLAST of MC08g1363 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 3.2e-50
Identity = 128/446 (28.70%), Postives = 230/446 (51.57%), Query Frame = 0


Query: 139 SLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFDEMRQRALAADRYTYSTLI 198
           ++A++D + E   Y P  F +  +I  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 199 TCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 258
               K G  D AL  L++ME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 259 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYSTLLSMFVENEKFLEALSV 318
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 319 YSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 378
           Y EM++ +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 379 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 438
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 439 YSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 498
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    +AG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 499 ----QPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIFGCMIDLFSRNKKHK 558
                P+ I   T I+   R G  EEA  + ++  + G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 559 NVVEVFEKMRSVGHFPNSNVIALVLN 581
              E+ ++MRS G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]

BLAST of MC08g1363 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 196.1 bits (497), Expect = 9.4e-50
Identity = 131/519 (25.24%), Postives = 250/519 (48.17%), Query Frame = 0


Query: 170 KQWEIAHGLFD-EMRQRALAA--DRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDL 229
           K++++A   FD  M+Q+   +  D    + +I+  GKEG   +A      +++D  S D+
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208

Query: 230 VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGK-AKLFREARFLLK 289
             Y++LI        Y +A+++F +++  G  P ++ YN ++NVFGK    + +   L++
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268

Query: 290 EMRAVGVVPDTVSYSTLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLD 349
           +M++ G+ PD  +Y+TL++         EA  V+ EM       D  T N ++DVYG+  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328

Query: 350 MVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 409
             KEA ++   M   G  P++V+YN+++  Y    +  EA+ L   M  K  + +V TY 
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 410 TMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS 469
           T++  + ++ + E A ++ +EM+N G +PN  T++  I ++G  GK      +F ++   
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448

Query: 470 GAEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNIPRK----TAITILARAGRIEEA 529
           G   D V + T++  + + G+ +    +  E+K+   +P +    T I+  +R G  E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 530 TWVFRQAFDAGELKDISIFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNA 589
             V+R+  DAG   D+S +  ++   +R    +   +V  +M      PN      +L+A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 590 YGKLRDFDKADAVYMEMQEEGCVFSDEVHFQMLGLYGARKDY----KRLDSLFERLDSDP 649
           Y   ++     ++  E+   G +    V  + L L  ++ D     +R  S  +     P
Sbjct: 569 YANGKEIGLMHSLAEEVY-SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 628

Query: 650 NINKKELHLVVASIYERANRLNDASRIMSRMNEMAISRS 677
           +I        + SIY R   +  A+ ++  M E   + S
Sbjct: 629 DITTLN---SMVSIYGRRQMVAKANGVLDYMKERGFTPS 663

The following BLAST results are available for this feature:

BLAST of MC08g1363 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLD8	1.2e-291	76.07	Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop...	[more]
Q9S7Q2	1.2e-52	23.64	Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop...	[more]
Q9LQ14	7.5e-52	30.18	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9LQ16	4.5e-49	28.70	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]
Q9LYZ9	1.3e-48	25.24	Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX...	[more]

BLAST of MC08g1363 vs. NCBI nr


Match Name	Identity	Description
XP_022157661.1	100.00	pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Momordica ...	[more]
XP_008443439.1	90.83	PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic ...	[more]
XP_023521621.1	90.53	pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucur...	[more]
XP_022934402.1	90.38	pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ...	[more]
KAG6580983.1	90.38	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of MC08g1363 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1DYU7	100.00	pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Momordic...	[more]
A0A5A7UGV7	90.83	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B8T9	90.83	pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis ...	[more]
A0A6J1F2M9	90.38	pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit...	[more]
A0A6J1J8J4	90.24	pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit...	[more]

BLAST of MC08g1363 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39980.1	8.5e-293	76.07	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74850.1	8.2e-54	23.64	plastid transcriptionally active 2	[more]
AT1G62930.1	5.3e-53	30.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62910.1	3.2e-50	28.70	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G02860.1	9.4e-50	25.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 472..498 e-value: 0.13 score: 12.6 coord: 227..257 e-value: 0.87 score: 10.0 coord: 578..603 e-value: 5.3E-4 score: 20.1 coord: 539..567 e-value: 0.0018 score: 18.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 318..378 e-value: 4.9E-9 score: 36.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 154..201 e-value: 1.2E-11 score: 44.6 coord: 400..443 e-value: 1.1E-14 score: 54.3 coord: 259..306 e-value: 7.3E-11 score: 42.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 367..400 e-value: 3.7E-6 score: 24.8 coord: 262..296 e-value: 3.7E-8 score: 31.0 coord: 297..330 e-value: 3.0E-6 score: 25.1 coord: 437..470 e-value: 1.1E-4 score: 20.1 coord: 402..436 e-value: 3.3E-8 score: 31.2 coord: 333..366 e-value: 6.8E-7 score: 27.1 coord: 192..224 e-value: 5.8E-7 score: 27.3 coord: 539..571 e-value: 1.4E-4 score: 19.8 coord: 158..185 e-value: 0.0025 score: 15.8 coord: 578..605 e-value: 9.5E-7 score: 26.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 365..399 score: 10.215989
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 260..294 score: 12.002681
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 435..469 score: 10.215989
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 330..364 score: 11.662881
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 225..259 score: 9.229472
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 190..224 score: 9.898111
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 536..570 score: 9.930995
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 400..434 score: 12.298636
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 470..504 score: 8.823904
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 571..605 score: 9.262356
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 295..329 score: 10.347525
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 155..189 score: 9.404853
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 428..501 e-value: 2.9E-16 score: 61.5 coord: 356..427 e-value: 4.7E-18 score: 67.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 101..237 e-value: 4.3E-23 score: 83.6 coord: 238..343 e-value: 3.6E-28 score: 100.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 502..675 e-value: 5.7E-20 score: 73.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	PANTHER	PTHR47447:SF7	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTIC	coord: 17..672
None	No IPR available	PANTHER	PTHR47447	OS03G0856100 PROTEIN	coord: 17..672

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1363.1	MC08g1363.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0031425	chloroplast RNA processing
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding