MC08g1350 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1350
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 12725047 .. 12725235 (+)
RNA-Seq Expression	MC08g1350
Synteny	MC08g1350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGTACCGAAACAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACT

mRNA sequence

GTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGTACCGAAACAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACT

Coding sequence (CDS)

GTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGTACCGAAACAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACT

Protein sequence

VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVRTST

Homology

[Close]

BLAST of MC08g1350 vs. NCBI nr
Match: PLY86165.1 (hypothetical protein LSAT_6X94260 [Lactuca sativa])

HSP 1 Score: 132 bits (333), Expect = 7.24e-38
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRP PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 90  VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 149

Query: 61  TST 63
           TST
Sbjct: 150 TST 152

[Close]

BLAST of MC08g1350 vs. NCBI nr
Match: KAG8363221.1 (hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia])

HSP 1 Score: 132 bits (333), Expect = 7.24e-38
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRP PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 90  VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 149

Query: 61  TST 63
           TST
Sbjct: 150 TST 152

[Close]

BLAST of MC08g1350 vs. NCBI nr
Match: KAG8369105.1 (hypothetical protein BUALT_Bualt15G0116000 [Buddleja alternifolia])

HSP 1 Score: 129 bits (325), Expect = 1.51e-36
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRP  KQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 98  VCLDLVPLSRPASKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 157

Query: 61  TST 63
           TST
Sbjct: 158 TST 160

[Close]

BLAST of MC08g1350 vs. NCBI nr
Match: KAF1876777.1 (hypothetical protein Lal_00043707 [Lupinus albus])

HSP 1 Score: 129 bits (325), Expect = 4.84e-35
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLV LSRP PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 231 VCLDLVSLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 290

Query: 61  TST 63
           TST
Sbjct: 291 TST 293

[Close]

BLAST of MC08g1350 vs. NCBI nr
Match: KAF1855277.1 (hypothetical protein Lal_00044973 [Lupinus albus])

HSP 1 Score: 129 bits (325), Expect = 1.14e-34
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLV LSRP PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 271 VCLDLVSLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 330

Query: 61  TST 63
           TST
Sbjct: 331 TST 333

[Close]

BLAST of MC08g1350 vs. ExPASy TrEMBL
Match: A0A2J6LFT8 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X94260 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 3.50e-38
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRP PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 90  VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 149

Query: 61  TST 63
           TST
Sbjct: 150 TST 152

[Close]

BLAST of MC08g1350 vs. ExPASy TrEMBL
Match: J3LNA6 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 2.52e-37
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
          VCLDLVPL++P PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 27 VCLDLVPLAQPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 86

Query: 61 TS 62
          TS
Sbjct: 87 TS 88

[Close]

BLAST of MC08g1350 vs. ExPASy TrEMBL
Match: I1QKX6 (Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 6.36e-37
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPL++P PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 58  VCLDLVPLAQPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 117

Query: 61  TS 62
           TS
Sbjct: 118 TS 119

[Close]

BLAST of MC08g1350 vs. ExPASy TrEMBL
Match: A0A2N9HQM6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41821 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 1.91e-35
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRP PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 365 VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 424

Query: 61  TST 63
           TST
Sbjct: 425 TST 427

[Close]

BLAST of MC08g1350 vs. ExPASy TrEMBL
Match: A0A6A5MTQ7 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043707 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 2.34e-35
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1   VCLDLVPLSRPVPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLV LSRP PKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 231 VCLDLVSLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 290

Query: 61  TST 63
           TST
Sbjct: 291 TST 293

The following BLAST results are available for this feature:

BLAST of MC08g1350 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1350 vs. NCBI nr


Match Name	E-value	Identity	Description
PLY86165.1	7.24e-38	98.41	hypothetical protein LSAT_6X94260 [Lactuca sativa]	[more]
KAG8363221.1	7.24e-38	98.41	hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia]	[more]
KAG8369105.1	1.51e-36	96.83	hypothetical protein BUALT_Bualt15G0116000 [Buddleja alternifolia]	[more]
KAF1876777.1	4.84e-35	96.83	hypothetical protein Lal_00043707 [Lupinus albus]	[more]
KAF1855277.1	1.14e-34	96.83	hypothetical protein Lal_00044973 [Lupinus albus]	[more]

BLAST of MC08g1350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2J6LFT8	3.50e-38	98.41	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X94260 PE=4 SV=1	[more]
J3LNA6	2.52e-37	95.16	Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1	[more]
I1QKX6	6.36e-37	95.16	Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=4 SV=1	[more]
A0A2N9HQM6	1.91e-35	98.41	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41821 PE=4 SV=1	[more]
A0A6A5MTQ7	2.34e-35	96.83	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043707 PE=4 SV=1	[more]

BLAST of MC08g1350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1350.1	MC08g1350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion