MC08g1349 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1349
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Myb-like domain-containing protein
Location	MC08: 12724040 .. 12724264 (+)
RNA-Seq Expression	MC08g1349
Synteny	MC08g1349

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTC

mRNA sequence

TTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTC

Coding sequence (CDS)

TTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTC

Protein sequence

LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEF

Homology

[Close]

BLAST of MC08g1349 vs. NCBI nr
Match: EPS74531.1 (hypothetical protein M569_00248, partial [Genlisea aurea])

HSP 1 Score: 169 bits (427), Expect = 1.23e-52
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60
          LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE
Sbjct: 1  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60

Query: 61 EAPLLPKLRGYFAEF 75
          EAPLLPKLRGYFAEF
Sbjct: 61 EAPLLPKLRGYFAEF 75

[Close]

BLAST of MC08g1349 vs. NCBI nr
Match: PWA54452.1 (hypothetical protein CTI12_AA435150 [Artemisia annua])

HSP 1 Score: 169 bits (427), Expect = 2.48e-51
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1   LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60
           LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE
Sbjct: 107 LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 166

Query: 61  EAPLLPKLRGYFAEF 75
           EAPLLPKLRGYFAEF
Sbjct: 167 EAPLLPKLRGYFAEF 181

[Close]

BLAST of MC08g1349 vs. NCBI nr
Match: KAG6474749.1 (hypothetical protein ZIOFF_068688 [Zingiber officinale])

HSP 1 Score: 169 bits (427), Expect = 4.71e-49
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1   LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60
           LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE
Sbjct: 244 LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 303

Query: 61  EAPLLPKLRGYFAEF 75
           EAPLLPKLRGYFAEF
Sbjct: 304 EAPLLPKLRGYFAEF 318

[Close]

BLAST of MC08g1349 vs. NCBI nr
Match: KAG6483622.1 (hypothetical protein ZIOFF_060273 [Zingiber officinale])

HSP 1 Score: 169 bits (427), Expect = 2.73e-48
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1   LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60
           LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE
Sbjct: 40  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 99

Query: 61  EAPLLPKLRGYFAEF 75
           EAPLLPKLRGYFAEF
Sbjct: 100 EAPLLPKLRGYFAEF 114

[Close]

BLAST of MC08g1349 vs. NCBI nr
Match: XP_020999426.1 (uncharacterized protein LOC110281477 [Arachis duranensis])

HSP 1 Score: 160 bits (404), Expect = 7.28e-48
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1   LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60
           L PPFTGASVAGSPV+RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLC 
Sbjct: 41  LLPPFTGASVAGSPVLRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCG 100

Query: 61  EAPLLPKLRGYFAEF 75
            APLLPKLRGYFAEF
Sbjct: 101 GAPLLPKLRGYFAEF 115

[Close]

BLAST of MC08g1349 vs. ExPASy TrEMBL
Match: S8DAJ4 (Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_00248 PE=4 SV=1)

HSP 1 Score: 169 bits (427), Expect = 5.94e-53
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60
          LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE
Sbjct: 1  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60

Query: 61 EAPLLPKLRGYFAEF 75
          EAPLLPKLRGYFAEF
Sbjct: 61 EAPLLPKLRGYFAEF 75

[Close]

BLAST of MC08g1349 vs. ExPASy TrEMBL
Match: A0A2U1LZL2 (Myb-like domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA435150 PE=4 SV=1)

HSP 1 Score: 169 bits (427), Expect = 1.20e-51
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1   LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60
           LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE
Sbjct: 107 LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 166

Query: 61  EAPLLPKLRGYFAEF 75
           EAPLLPKLRGYFAEF
Sbjct: 167 EAPLLPKLRGYFAEF 181

[Close]

BLAST of MC08g1349 vs. ExPASy TrEMBL
Match: A0A6P5NU31 (uncharacterized protein LOC110281477 OS=Arachis duranensis OX=130453 GN=LOC110281477 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 3.52e-48
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1   LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60
           L PPFTGASVAGSPV+RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLC 
Sbjct: 41  LLPPFTGASVAGSPVLRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCG 100

Query: 61  EAPLLPKLRGYFAEF 75
            APLLPKLRGYFAEF
Sbjct: 101 GAPLLPKLRGYFAEF 115

[Close]

BLAST of MC08g1349 vs. ExPASy TrEMBL
Match: A0A427AP02 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00020298 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 1.92e-39
Identity = 62/68 (91.18%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 8   ASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPK 67
           A   GSPVIRSPTSLTFRHWAGVSPHTWSYDFAET VFGKQSP PGH DPLCEEAPLLPK
Sbjct: 34  AEFXGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETYVFGKQSPEPGHYDPLCEEAPLLPK 93

Query: 68  LRGYFAEF 75
           LRGYFAEF
Sbjct: 94  LRGYFAEF 101

[Close]

BLAST of MC08g1349 vs. ExPASy TrEMBL
Match: A0A540LJL7 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_027793 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 2.04e-38
Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 16 IRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEF 75
          + SPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE APLLPKLRGYFAEF
Sbjct: 24 VMSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEGAPLLPKLRGYFAEF 83

The following BLAST results are available for this feature:

BLAST of MC08g1349 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1349 vs. NCBI nr


Match Name	E-value	Identity	Description
EPS74531.1	1.23e-52	100.00	hypothetical protein M569_00248, partial [Genlisea aurea]	[more]
PWA54452.1	2.48e-51	100.00	hypothetical protein CTI12_AA435150 [Artemisia annua]	[more]
KAG6474749.1	4.71e-49	100.00	hypothetical protein ZIOFF_068688 [Zingiber officinale]	[more]
KAG6483622.1	2.73e-48	100.00	hypothetical protein ZIOFF_060273 [Zingiber officinale]	[more]
XP_020999426.1	7.28e-48	94.67	uncharacterized protein LOC110281477 [Arachis duranensis]	[more]

BLAST of MC08g1349 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
S8DAJ4	5.94e-53	100.00	Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_00248 PE=...	[more]
A0A2U1LZL2	1.20e-51	100.00	Myb-like domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA435150...	[more]
A0A6P5NU31	3.52e-48	94.67	uncharacterized protein LOC110281477 OS=Arachis duranensis OX=130453 GN=LOC11028...	[more]
A0A427AP02	1.92e-39	91.18	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00020298 PE=4 SV=1	[more]
A0A540LJL7	2.04e-38	95.00	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_027793 PE=4 SV=1	[more]

BLAST of MC08g1349 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1349.1	MC08g1349.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast