MC08g1348 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1348
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Cell wall-associated hydrolase
Location	MC08: 12723107 .. 12723280 (+)
RNA-Seq Expression	MC08g1348
Synteny	MC08g1348

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAG

mRNA sequence

ATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAG

Coding sequence (CDS)

ATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAG

Protein sequence

MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE

Homology

[Close]

BLAST of MC08g1348 vs. NCBI nr
Match: QHO21812.1 (Cell wall-associated hydrolase [Arachis hypogaea])

HSP 1 Score: 119 bits (297), Expect = 1.16e-33
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
          MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE
Sbjct: 1  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58

[Close]

BLAST of MC08g1348 vs. NCBI nr
Match: QHN92996.1 (uncharacterized protein DS421_17g588840 [Arachis hypogaea])

HSP 1 Score: 119 bits (297), Expect = 4.38e-33
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1   MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
           MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE
Sbjct: 48  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 105

[Close]

BLAST of MC08g1348 vs. NCBI nr
Match: KAF3449752.1 (hypothetical protein FNV43_RR05830 [Rhamnella rubrinervis])

HSP 1 Score: 119 bits (297), Expect = 4.38e-33
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1   MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
           MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE
Sbjct: 48  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 105

[Close]

BLAST of MC08g1348 vs. NCBI nr
Match: YP_001152219.1 (ORF58f [Pinus koraiensis] >ABP35460.1 ORF58f [Pinus koraiensis])

HSP 1 Score: 116 bits (290), Expect = 1.36e-32
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
          MDRTVSRRSEPSSRTALMGEQPNPWN+L PQVAKSRHRGAKPSRRCELLGKISLLSLE
Sbjct: 1  MDRTVSRRSEPSSRTALMGEQPNPWNVLPPQVAKSRHRGAKPSRRCELLGKISLLSLE 58

[Close]

BLAST of MC08g1348 vs. NCBI nr
Match: KAG4909452.1 (hypothetical protein JHK87_055568 [Glycine soja] >KAG4909464.1 hypothetical protein JHK87_055580 [Glycine soja] >KAG4914203.1 hypothetical protein JHK87_051760 [Glycine soja])

HSP 1 Score: 117 bits (294), Expect = 2.40e-32
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
          MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSL+
Sbjct: 1  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLD 58

[Close]

BLAST of MC08g1348 vs. ExPASy TrEMBL
Match: A0A2U1NFY8 (Cell wall-associated hydrolase OS=Artemisia annua OX=35608 GN=CTI12_AA270580 PE=4 SV=1)

HSP 1 Score: 115 bits (288), Expect = 7.53e-32
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1   MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
           MDRTVSRRSE SSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE
Sbjct: 62  MDRTVSRRSERSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 119

[Close]

BLAST of MC08g1348 vs. ExPASy TrEMBL
Match: A0A4S4EDU9 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017304 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 2.79e-31
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
          MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE
Sbjct: 1  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58

[Close]

BLAST of MC08g1348 vs. ExPASy TrEMBL
Match: T2DPD7 (Cell wall-associated hydrolase OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 119 bits (297), Expect = 2.52e-30
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1   MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
           MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE
Sbjct: 72  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 129

[Close]

BLAST of MC08g1348 vs. ExPASy TrEMBL
Match: A0A7T7BVV6 (Uncharacterized protein OS=Chimonobambusa sichuanensis OX=387602 GN=ycf15 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 2.60e-30
Identity = 55/58 (94.83%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 1  MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
          MDRTVSRRSEPSSRTALMGEQPNPWN LQ QVAKSRHRGAKPSRRC LLGKISLLSLE
Sbjct: 1  MDRTVSRRSEPSSRTALMGEQPNPWNHLQLQVAKSRHRGAKPSRRCGLLGKISLLSLE 58

[Close]

BLAST of MC08g1348 vs. ExPASy TrEMBL
Match: A0A2I0W8Y0 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006705 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 3.37e-30
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 1   MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 58
           MD+TVSR SEP+S TALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE
Sbjct: 48  MDQTVSRYSEPNSPTALMGEQPNPWNILQPQVAKSRHRGAKPSRRCELLGKISLLSLE 105

The following BLAST results are available for this feature:

BLAST of MC08g1348 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1348 vs. NCBI nr


Match Name	E-value	Identity	Description
QHO21812.1	1.16e-33	100.00	Cell wall-associated hydrolase [Arachis hypogaea]	[more]
QHN92996.1	4.38e-33	100.00	uncharacterized protein DS421_17g588840 [Arachis hypogaea]	[more]
KAF3449752.1	4.38e-33	100.00	hypothetical protein FNV43_RR05830 [Rhamnella rubrinervis]	[more]
YP_001152219.1	1.36e-32	96.55	ORF58f [Pinus koraiensis] >ABP35460.1 ORF58f [Pinus koraiensis]	[more]
KAG4909452.1	2.40e-32	98.28	hypothetical protein JHK87_055568 [Glycine soja] >KAG4909464.1 hypothetical prot...	[more]

BLAST of MC08g1348 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2U1NFY8	7.53e-32	98.28	Cell wall-associated hydrolase OS=Artemisia annua OX=35608 GN=CTI12_AA270580 PE=...	[more]
A0A4S4EDU9	2.79e-31	100.00	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0173...	[more]
T2DPD7	2.52e-30	100.00	Cell wall-associated hydrolase OS=Phaseolus vulgaris OX=3885 PE=2 SV=1	[more]
A0A7T7BVV6	2.60e-30	94.83	Uncharacterized protein OS=Chimonobambusa sichuanensis OX=387602 GN=ycf15 PE=4 S...	[more]
A0A2I0W8Y0	3.37e-30	93.10	Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006705 PE=4...	[more]

BLAST of MC08g1348 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1348.1	MC08g1348.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity