MC08g1329 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1329
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Natterin-3 like
Location	MC08: 12269409 .. 12269720 (+)
RNA-Seq Expression	MC08g1329
Synteny	MC08g1329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGAAGAAGCAAAGAGCCGTGCCGATGGCAACAAATTCCCCAAGCATTTCGACCTCAAATCCAGCCACAACGACAAGTACCTCCACTACATAAACTACCACGACAACGAATCATTTGATGGTCTTCTCCAATTCACCAGCGATAAAATGATAAGCCCATACACCAAGTTCGAATTCGTGTATTCCGGCATCGAAGAATGCTACCACTGTTACAACAACAACAGATATTTGGTACGTCACGACGACAAATCATTATATATCGTTGCAACCGTCTCCAAACCCGTAAACGACCCTAATGATTGGAGATGTACG

mRNA sequence

GAGGAAGAAGCAAAGAGCCGTGCCGATGGCAACAAATTCCCCAAGCATTTCGACCTCAAATCCAGCCACAACGACAAGTACCTCCACTACATAAACTACCACGACAACGAATCATTTGATGGTCTTCTCCAATTCACCAGCGATAAAATGATAAGCCCATACACCAAGTTCGAATTCGTGTATTCCGGCATCGAAGAATGCTACCACTGTTACAACAACAACAGATATTTGGTACGTCACGACGACAAATCATTATATATCGTTGCAACCGTCTCCAAACCCGTAAACGACCCTAATGATTGGAGATGTACG

Coding sequence (CDS)

GAGGAAGAAGCAAAGAGCCGTGCCGATGGCAACAAATTCCCCAAGCATTTCGACCTCAAATCCAGCCACAACGACAAGTACCTCCACTACATAAACTACCACGACAACGAATCATTTGATGGTCTTCTCCAATTCACCAGCGATAAAATGATAAGCCCATACACCAAGTTCGAATTCGTGTATTCCGGCATCGAAGAATGCTACCACTGTTACAACAACAACAGATATTTGGTACGTCACGACGACAAATCATTATATATCGTTGCAACCGTCTCCAAACCCGTAAACGACCCTAATGATTGGAGATGTACG

Protein sequence

EEEAKSRADGNKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFVYSGIEECYHCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT

Homology

[Close]

BLAST of MC08g1329 vs. NCBI nr
Match: XP_022157623.1 (uncharacterized protein LOC111024284 [Momordica charantia])

HSP 1 Score: 154 bits (389), Expect = 4.57e-42
Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 1   EEEAKSRADGNKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFV 60
           EEE K+   GNKFP+ F +KSSHNDKYL YINY  NESFDG+LQFT  +MISPYTKFEFV
Sbjct: 24  EEEEKNYVAGNKFPRRFAIKSSHNDKYLRYINYDSNESFDGVLQFTGGRMISPYTKFEFV 83

Query: 61  YSGIEECYH--CYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
           +S ++ C+H  C  NNRYLVR D+KS YIVAT S PVNDP+DWRCT
Sbjct: 84  HSNVKGCFHIRCCYNNRYLVRRDEKSSYIVATASDPVNDPSDWRCT 129

[Close]

BLAST of MC08g1329 vs. NCBI nr
Match: XP_022155413.1 (uncharacterized protein LOC111022561 [Momordica charantia])

HSP 1 Score: 120 bits (302), Expect = 1.48e-29
Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 1   EEEAKSRADGNKF-PKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEF 60
           E E ++R DG+   P+HF +KS +NDKYL Y++Y D++ FDGLLQFT ++MISPYTKFE 
Sbjct: 25  EAEERNRDDGDHIIPRHFAIKSKYNDKYLRYVSYDDDQLFDGLLQFTGERMISPYTKFEV 84

Query: 61  VYSGIEECY---HCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
            YS I + Y    C  NNRYLVRH   + YIVA  S+PVND +DWRCT
Sbjct: 85  EYSDIGKGYVQIRCCYNNRYLVRHRIDTSYIVAAASEPVNDLSDWRCT 132

[Close]

BLAST of MC08g1329 vs. NCBI nr
Match: XP_022157621.1 (uncharacterized protein LOC111024281 isoform X2 [Momordica charantia])

HSP 1 Score: 84.0 bits (206), Expect = 2.66e-16
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 11  NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFVYSGIEECY-- 70
           N  P++F LKS HN  YL YIN +D+    G L+F+  +++SPYTKFE  YS + + Y  
Sbjct: 46  NIIPRYFALKSKHNTNYLRYINEYDDR-IGGFLRFSGQRLVSPYTKFEVEYSDLGKGYVH 105

Query: 71  -HCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
             C  NN+Y VR   KS YIVAT ++   D + W CT
Sbjct: 106 IRCCYNNKYWVRQSSKSSYIVATANQADEDLSKWSCT 141

[Close]

BLAST of MC08g1329 vs. NCBI nr
Match: XP_022157620.1 (uncharacterized protein LOC111024281 isoform X1 [Momordica charantia])

HSP 1 Score: 84.0 bits (206), Expect = 2.74e-16
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 11  NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFVYSGIEECY-- 70
           N  P++F LKS HN  YL YIN +D+    G L+F+  +++SPYTKFE  YS + + Y  
Sbjct: 46  NIIPRYFALKSKHNTNYLRYINEYDDR-IGGFLRFSGQRLVSPYTKFEVEYSDLGKGYVH 105

Query: 71  -HCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
             C  NN+Y VR   KS YIVAT ++   D + W CT
Sbjct: 106 IRCCYNNKYWVRQSSKSSYIVATANQADEDLSKWSCT 141

[Close]

BLAST of MC08g1329 vs. NCBI nr
Match: XP_022157622.1 (uncharacterized protein LOC111024282 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 1.07e-15
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 9   DGNKF-PKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFVYSGIEEC 68
           DG K  P++F LKS HN  YL YIN  D++   G L F+  +MISPYTKFE  +S + + 
Sbjct: 33  DGQKIIPRYFGLKSKHNTNYLRYIN-EDDDRVGGFLHFSGQRMISPYTKFEVEHSNLGKG 92

Query: 69  Y---HCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
           Y    C  NN+Y VR   KS YIVA  ++  +D + W CT
Sbjct: 93  YVHVRCCFNNKYWVRESSKSNYIVAAANEAHDDLSKWSCT 131

[Close]

BLAST of MC08g1329 vs. ExPASy TrEMBL
Match: A0A6J1DTU6 (uncharacterized protein LOC111024284 OS=Momordica charantia OX=3673 GN=LOC111024284 PE=3 SV=1)

HSP 1 Score: 154 bits (389), Expect = 2.21e-42
Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 1   EEEAKSRADGNKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFV 60
           EEE K+   GNKFP+ F +KSSHNDKYL YINY  NESFDG+LQFT  +MISPYTKFEFV
Sbjct: 24  EEEEKNYVAGNKFPRRFAIKSSHNDKYLRYINYDSNESFDGVLQFTGGRMISPYTKFEFV 83

Query: 61  YSGIEECYH--CYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
           +S ++ C+H  C  NNRYLVR D+KS YIVAT S PVNDP+DWRCT
Sbjct: 84  HSNVKGCFHIRCCYNNRYLVRRDEKSSYIVATASDPVNDPSDWRCT 129

[Close]

BLAST of MC08g1329 vs. ExPASy TrEMBL
Match: A0A6J1DMW2 (uncharacterized protein LOC111022561 OS=Momordica charantia OX=3673 GN=LOC111022561 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 7.18e-30
Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 1   EEEAKSRADGNKF-PKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEF 60
           E E ++R DG+   P+HF +KS +NDKYL Y++Y D++ FDGLLQFT ++MISPYTKFE 
Sbjct: 25  EAEERNRDDGDHIIPRHFAIKSKYNDKYLRYVSYDDDQLFDGLLQFTGERMISPYTKFEV 84

Query: 61  VYSGIEECY---HCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
            YS I + Y    C  NNRYLVRH   + YIVA  S+PVND +DWRCT
Sbjct: 85  EYSDIGKGYVQIRCCYNNRYLVRHRIDTSYIVAAASEPVNDLSDWRCT 132

[Close]

BLAST of MC08g1329 vs. ExPASy TrEMBL
Match: A0A6J1DYR0 (uncharacterized protein LOC111024281 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024281 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.29e-16
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 11  NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFVYSGIEECY-- 70
           N  P++F LKS HN  YL YIN +D+    G L+F+  +++SPYTKFE  YS + + Y  
Sbjct: 46  NIIPRYFALKSKHNTNYLRYINEYDDR-IGGFLRFSGQRLVSPYTKFEVEYSDLGKGYVH 105

Query: 71  -HCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
             C  NN+Y VR   KS YIVAT ++   D + W CT
Sbjct: 106 IRCCYNNKYWVRQSSKSSYIVATANQADEDLSKWSCT 141

[Close]

BLAST of MC08g1329 vs. ExPASy TrEMBL
Match: A0A6J1DTL3 (uncharacterized protein LOC111024281 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024281 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.32e-16
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 11  NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFVYSGIEECY-- 70
           N  P++F LKS HN  YL YIN +D+    G L+F+  +++SPYTKFE  YS + + Y  
Sbjct: 46  NIIPRYFALKSKHNTNYLRYINEYDDR-IGGFLRFSGQRLVSPYTKFEVEYSDLGKGYVH 105

Query: 71  -HCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
             C  NN+Y VR   KS YIVAT ++   D + W CT
Sbjct: 106 IRCCYNNKYWVRQSSKSSYIVATANQADEDLSKWSCT 141

[Close]

BLAST of MC08g1329 vs. ExPASy TrEMBL
Match: A0A6J1DUY9 (uncharacterized protein LOC111024282 OS=Momordica charantia OX=3673 GN=LOC111024282 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.16e-16
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 9   DGNKF-PKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMISPYTKFEFVYSGIEEC 68
           DG K  P++F LKS HN  YL YIN  D++   G L F+  +MISPYTKFE  +S + + 
Sbjct: 33  DGQKIIPRYFGLKSKHNTNYLRYIN-EDDDRVGGFLHFSGQRMISPYTKFEVEHSNLGKG 92

Query: 69  Y---HCYNNNRYLVRHDDKSLYIVATVSKPVNDPNDWRCT 104
           Y    C  NN+Y VR   KS YIVA  ++  +D + W CT
Sbjct: 93  YVHVRCCFNNKYWVRESSKSNYIVAAANEAHDDLSKWSCT 131

The following BLAST results are available for this feature:

BLAST of MC08g1329 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1329 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157623.1	4.57e-42	69.81	uncharacterized protein LOC111024284 [Momordica charantia]	[more]
XP_022155413.1	1.48e-29	57.41	uncharacterized protein LOC111022561 [Momordica charantia]	[more]
XP_022157621.1	2.66e-16	45.36	uncharacterized protein LOC111024281 isoform X2 [Momordica charantia]	[more]
XP_022157620.1	2.74e-16	45.36	uncharacterized protein LOC111024281 isoform X1 [Momordica charantia]	[more]
XP_022157622.1	1.07e-15	46.00	uncharacterized protein LOC111024282 [Momordica charantia]	[more]

BLAST of MC08g1329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTU6	2.21e-42	69.81	uncharacterized protein LOC111024284 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DMW2	7.18e-30	57.41	uncharacterized protein LOC111022561 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DYR0	1.29e-16	45.36	uncharacterized protein LOC111024281 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DTL3	1.32e-16	45.36	uncharacterized protein LOC111024281 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DUY9	5.16e-16	46.00	uncharacterized protein LOC111024282 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of MC08g1329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.80.10.50		coord: 12..104 e-value: 3.5E-20 score: 74.2
None	No IPR available	PANTHER	PTHR39244	NATTERIN-4	coord: 12..104
IPR008998	Agglutinin domain	PFAM	PF07468	Agglutinin	coord: 12..104 e-value: 1.1E-9 score: 38.6
IPR036242	Agglutinin domain superfamily	SUPERFAMILY	50382	Agglutinin	coord: 13..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1329.1	MC08g1329.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region