MC08g0957 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0957
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein kinase domain-containing protein
LocationMC08: 7671822 .. 7672019 (-)
RNA-Seq ExpressionMC08g0957
SyntenyMC08g0957
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCTCGTCCGAATCGTCCATCCCGGCGGCCACGTGGAGGTCCACGACGGCCCCGTCCGGGCGGCGGAGATTATGCTCCGGAACCCCAAATTCTGCGTCACTCACTCCCAAGCATCTCGCCAGCCATGGGCGATTGTCTCGCCGGACACGACGCTCATGGTCGGCCGCAAATACTACCTCTTCCCGGAAAGTTCCGTC

mRNA sequence

AATCTCGTCCGAATCGTCCATCCCGGCGGCCACGTGGAGGTCCACGACGGCCCCGTCCGGGCGGCGGAGATTATGCTCCGGAACCCCAAATTCTGCGTCACTCACTCCCAAGCATCTCGCCAGCCATGGGCGATTGTCTCGCCGGACACGACGCTCATGGTCGGCCGCAAATACTACCTCTTCCCGGAAAGTTCCGTC

Coding sequence (CDS)

AATCTCGTCCGAATCGTCCATCCCGGCGGCCACGTGGAGGTCCACGACGGCCCCGTCCGGGCGGCGGAGATTATGCTCCGGAACCCCAAATTCTGCGTCACTCACTCCCAAGCATCTCGCCAGCCATGGGCGATTGTCTCGCCGGACACGACGCTCATGGTCGGCCGCAAATACTACCTCTTCCCGGAAAGTTCCGTC

Protein sequence

NLVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLFPESSV
Homology
BLAST of MC08g0957 vs. NCBI nr
Match: XP_022948495.1 (uncharacterized protein LOC111452155 isoform X2 [Cucurbita moschata] >KAG6606824.1 hypothetical protein SDJN03_00166, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117 bits (292), Expect = 2.02e-31
Identity = 51/65 (78.46%), Postives = 60/65 (92.31%), Query Frame = 0

Query: 2  LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
          LVRIVHPGGH+E+HDGP+RAAEIMLRNP+F +THSQ++  PWAIVSPDTTLM+G KYYL 
Sbjct: 18 LVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLL 77

Query: 62 PESSV 66
          PE+SV
Sbjct: 78 PENSV 82

BLAST of MC08g0957 vs. NCBI nr
Match: XP_023523994.1 (uncharacterized protein LOC111788070 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523995.1 uncharacterized protein LOC111788070 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117 bits (292), Expect = 6.24e-31
Identity = 51/65 (78.46%), Postives = 60/65 (92.31%), Query Frame = 0

Query: 2   LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
           LVRIVHPGGH+E+HDGP+RAAEIMLRNP+F +THSQ++  PWAIVSPDTTLM+G KYYL 
Sbjct: 60  LVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLL 119

Query: 62  PESSV 66
           PE+SV
Sbjct: 120 PENSV 124

BLAST of MC08g0957 vs. NCBI nr
Match: XP_022948492.1 (uncharacterized protein LOC111452155 isoform X1 [Cucurbita moschata] >XP_022948493.1 uncharacterized protein LOC111452155 isoform X1 [Cucurbita moschata] >XP_022948494.1 uncharacterized protein LOC111452155 isoform X1 [Cucurbita moschata])

HSP 1 Score: 117 bits (292), Expect = 6.24e-31
Identity = 51/65 (78.46%), Postives = 60/65 (92.31%), Query Frame = 0

Query: 2   LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
           LVRIVHPGGH+E+HDGP+RAAEIMLRNP+F +THSQ++  PWAIVSPDTTLM+G KYYL 
Sbjct: 60  LVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLL 119

Query: 62  PESSV 66
           PE+SV
Sbjct: 120 PENSV 124

BLAST of MC08g0957 vs. NCBI nr
Match: XP_023523993.1 (uncharacterized protein LOC111788070 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117 bits (292), Expect = 8.06e-31
Identity = 51/65 (78.46%), Postives = 60/65 (92.31%), Query Frame = 0

Query: 2   LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
           LVRIVHPGGH+E+HDGP+RAAEIMLRNP+F +THSQ++  PWAIVSPDTTLM+G KYYL 
Sbjct: 70  LVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLL 129

Query: 62  PESSV 66
           PE+SV
Sbjct: 130 PENSV 134

BLAST of MC08g0957 vs. NCBI nr
Match: XP_022998312.1 (uncharacterized protein LOC111492985 isoform X2 [Cucurbita maxima])

HSP 1 Score: 102 bits (253), Expect = 1.67e-25
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0

Query: 2  LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
          LVRIVHP GH+E+HD P+ AAEIMLRNP+F +THSQ++  PWAIVSPDTTLM+  KY L 
Sbjct: 18 LVRIVHPSGHIELHDSPIWAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLCCKYDLL 77

Query: 62 PESSV 66
          PE+SV
Sbjct: 78 PENSV 82

BLAST of MC08g0957 vs. ExPASy TrEMBL
Match: A0A6J1GA04 (uncharacterized protein LOC111452155 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452155 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 9.77e-32
Identity = 51/65 (78.46%), Postives = 60/65 (92.31%), Query Frame = 0

Query: 2  LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
          LVRIVHPGGH+E+HDGP+RAAEIMLRNP+F +THSQ++  PWAIVSPDTTLM+G KYYL 
Sbjct: 18 LVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLL 77

Query: 62 PESSV 66
          PE+SV
Sbjct: 78 PENSV 82

BLAST of MC08g0957 vs. ExPASy TrEMBL
Match: A0A6J1G9G0 (uncharacterized protein LOC111452155 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452155 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 3.02e-31
Identity = 51/65 (78.46%), Postives = 60/65 (92.31%), Query Frame = 0

Query: 2   LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
           LVRIVHPGGH+E+HDGP+RAAEIMLRNP+F +THSQ++  PWAIVSPDTTLM+G KYYL 
Sbjct: 60  LVRIVHPGGHIELHDGPIRAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLGCKYYLL 119

Query: 62  PESSV 66
           PE+SV
Sbjct: 120 PENSV 124

BLAST of MC08g0957 vs. ExPASy TrEMBL
Match: A0A5B7AIB1 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_025901 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 3.29e-26
Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 0

Query: 2  LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
          LV+IVHPGGHVE+HD PV AAEIMLRNP+ CV H    RQPWAIV+PDTTLM+G+K+Y+ 
Sbjct: 6  LVKIVHPGGHVELHDRPVLAAEIMLRNPRCCVAHPHVFRQPWAIVAPDTTLMLGQKFYVV 65

Query: 62 PESSV 66
          P S++
Sbjct: 66 PISTI 70

BLAST of MC08g0957 vs. ExPASy TrEMBL
Match: A0A5B7ALW7 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_025902 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 3.64e-26
Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 0

Query: 2  LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
          LV+IVHPGGHVE+HD PV AAEIMLRNP+ CV H    RQPWAIV+PDTTLM+G+K+Y+ 
Sbjct: 15 LVKIVHPGGHVELHDRPVLAAEIMLRNPRCCVAHPHVFRQPWAIVAPDTTLMLGQKFYVV 74

Query: 62 PESSV 66
          P S++
Sbjct: 75 PISTI 79

BLAST of MC08g0957 vs. ExPASy TrEMBL
Match: A0A6J1K7L4 (uncharacterized protein LOC111492985 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492985 PE=4 SV=1)

HSP 1 Score: 102 bits (253), Expect = 8.11e-26
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0

Query: 2  LVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQASRQPWAIVSPDTTLMVGRKYYLF 61
          LVRIVHP GH+E+HD P+ AAEIMLRNP+F +THSQ++  PWAIVSPDTTLM+  KY L 
Sbjct: 18 LVRIVHPSGHIELHDSPIWAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLCCKYDLL 77

Query: 62 PESSV 66
          PE+SV
Sbjct: 78 PENSV 82

BLAST of MC08g0957 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = 0

Query: 1  NLVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTH--SQASRQPWAIVSPDTTLMVGRKY 60
          +L+RIVH  GHV+    P+ A EI+  NP   ++   SQ   +   I+SP++ L  G  Y
Sbjct: 19 DLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCSQGVVRKILILSPESELKRGSIY 78

Query: 61 YLFPESSV 67
          +L P++S+
Sbjct: 79 FLIPDTSM 86

BLAST of MC08g0957 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 9.9e-05
Identity = 24/73 (32.88%), Postives = 35/73 (47.95%), Query Frame = 0

Query: 1  NLVRIVHPGGHVEVHDGPVRAAEIMLRNPKFCVTHSQA-----------SRQPWAIVSPD 60
          +++RIVH  GHVE   G + A+EIM  +PK  +    +           S     IV P+
Sbjct: 19 DVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSDHDERDVISATKIVIVPPE 78

Query: 61 TTLMVGRKYYLFP 63
            L  G+ Y+L P
Sbjct: 79 AELQRGKIYFLMP 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022948495.12.02e-3178.46uncharacterized protein LOC111452155 isoform X2 [Cucurbita moschata] >KAG6606824... [more]
XP_023523994.16.24e-3178.46uncharacterized protein LOC111788070 isoform X2 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022948492.16.24e-3178.46uncharacterized protein LOC111452155 isoform X1 [Cucurbita moschata] >XP_0229484... [more]
XP_023523993.18.06e-3178.46uncharacterized protein LOC111788070 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022998312.11.67e-2570.77uncharacterized protein LOC111492985 isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1GA049.77e-3278.46uncharacterized protein LOC111452155 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1G9G03.02e-3178.46uncharacterized protein LOC111452155 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A5B7AIB13.29e-2669.23Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_025901... [more]
A0A5B7ALW73.64e-2669.23Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_025902... [more]
A0A6J1K7L48.11e-2670.77uncharacterized protein LOC111492985 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT2G30230.12.4e-0636.76unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G29195.19.9e-0532.88unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 2..63
e-value: 2.0E-17
score: 64.2
NoneNo IPR availablePANTHERPTHR33052:SF24OS06G0568400 PROTEINcoord: 2..66
NoneNo IPR availablePANTHERPTHR33052DUF4228 DOMAIN PROTEIN-RELATEDcoord: 2..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0957.1MC08g0957.1mRNA