MC08g0928 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g0928
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ubiquitin receptor RAD23
Location	MC08: 7407172 .. 7410303 (-)
RNA-Seq Expression	MC08g0928
Synteny	MC08g0928

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATGGCTGTCAAGAAAAATATTGAAGATATACAAGGAAAGGATAATTATCCTTGTGGTCAGCAATTATTGATTCACAACGGGAAAGTTCTGAAAGATGAAAGTACTCTGGCAGAAAACAAAGTATCCGAAGAGGGCTTTCTAGTTGTAATGCTCAGCAAGGTAATCTTTGGTCCTATAATTTTTTTATACAAGAAGTCTCTAAAGATATGGTTTTATTTGGACTTTAATAGATGGCTGAAATGTCAAATATGGTCATGCTCTTTCCATGTTGTTGCCTTAATTGTAATGTGTTTGCTTCTACTGCAGAGCAAAACATCAGGCTCAGTAGGGCAGTCCTCGACTCAGGTAATATTTGCTCATTCTCGTTGCCAATTGGTTATTATTTTCTCATGTTAACCTCCTTTGGAACCTTTTTTTTGCAGCCTGCTCAAAGCCCTCCTGTAGCTCAACCAGTTTTAAATTCAACTCCGACAACTCAAGTGACACCATCACCGACTCCTGCACTCCAAGCTCCCACGCAAGCACCGTCGTCGTAAGTTTCTCAAGAGTGATCTTCTTTATGCATTTTTCCTTGATCAGTTGAATAATCATAATCCATATTCCTTTTTTGTTCTTGTTTTCTAGTGCCCCTAGGAACACTACATCTACTTCAGACAGGGTGGCAGATAAGTATGGCTTCTATTTCCTGTTGATATATTTTTAACTTCAAGAGGCCGGAATTGGCCAATAAACCACATACTATTTTCTAAGAATATATCTAAGCTATAACAATGTCAAATATATTAAAAGCTACAGACTGAACGTATTTTTTTCAGAGTTCTTGATTGTAAACTATTGTGATTCGGGACCAACAGCTGATATTATTAGGCTACGTGCAATATGTTTCCTCCTCTCTGGGTTTAATGTACGAAGAAATTGGCTTGCTGGTGAGAAAGTTTCAGACTTTTTTTTGGGGATCTTTTGCAGTGTGCAGACAGATACATATGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAACCTGGAACAGACTATTCAACAAATAATGGATATGGGGGGTGGCAATTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCTTATAATAATCCAGAGCGAGCAGTGGACTACTTGTACTCTGTATGTCTAAATCGTAATGTGTGAGTTTTTTTGAAACCTGTTTTGAATATTTCCAGTCACCGAGGGTGTTCTTCGTGTTCAGGGTATTCCAGAAACAGCAGAAGTTGCAGTCCCAGTGGCTCGCTTCGGTTCTGGTCAAGCCACTGAAACTGATGCATCTCTCGCTGCACCTGCCTCTGGAGCACCTAACACAGCCCCCTTAAATATGTTTCCTCAGGTGAAAATTTGGATGCATGAAGAAGGACACTTTGTTTGTTTGCTTGCATTTACTTATTTTTAATGGGTGGCAATCACGTGCAGGAGGCCCTTTCTGGTGGTGGTGGTGGTGGTGGTGGTAACCTTGGATCTCTTGAATTCCTTAGAAACAATCCTCAGGTAACTAGTGGAATATCATTTATGGGGTTTTGCTGATTGATAAGCTCGTTAGCTTTCTATACTAGAGTTTTTGGTGCATTGAGTTTAAAAATCTAAAGTTGTTTGGACTTCGAAGTCTTCTTACAACAAATACTTGTGTTAGTTTGCATCTCCTTTCTGCATTGATTCAAATAAAGTATAGCAATTAAAAAGTCATAGACATTTTTTTTATAAGAAACCTGAGACTTGTATTACTCACAAAAAAGAACAACCTAGGGGCAGGGGATGAGATAACCCCCCTCCCAAGGAACTAACACAAGAAGGCCTTCCAATCAGTTAAAGATTCTATATGTGGATTGCTTTAGCTCAGTCATATCAGTCGATTATATCCATATCGTTTGAACAAATGCTTGCCAAAATCTTGTTCTCTTTATTGCTTATGGGCTATGGATTTGAATACAACTTAAATGTGAAGTAGTTACTGAATGATATTTGTTATCATTTCCTTGTTCACTTTCTAGTTCCAAGCCCTGCGAACGATGGTGCATACAAATCCTCAGATCTTACAGGTATACACCCTTCTGCCTTCTGCTTTGCAATTTACTTGGTGAATTTTGTCATGGTTTGTCCAAGAGTTAAATCTTTTGCTTCTGATGGCAGCCCATGCTTCAAGAACTTGGCAAGCAGAATCCCCAGCTCTTGAGACTCATTCAAGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTCTCGACAATTTTGAGGGGTGAGTCTTTCTTTGCTGTCATCTGGTTAATTTTAGATCTTGTTAACTTGAAACCTCCTAGTTCTGCAGTTCTTCAGATGTGATTGGTCATGGGTCCTTTTTGTTGTCGTTAATCATGGTTTATTATTAATCTAAACATGATCCATTGCCTAGAAACCCCTTCTCAGATTTTTTTTCCCAACTCCAATGCACGGTGCTTCTCTGAAGTAAGGTCCCTGTGTGGGGATAATAGTAGATAATCAAGTCAGGTGTATTAATGAAAGGAGAATCTTCTGCATTCTTCTTGTTACCGTTTATCTTTGTTGTTAAACTACATCACCCATCCAGAGCAACTTGGCATTACACCACTCCACAAGCATGGAATTTGAGCATGATGCTGTATGTAAATACCCGGCATTCGACCCTAGGCTGGACAGTTTATTTATTTATTGTCTCTGTAAAGTAATAATCATGCTTAAAAGCCCGAATGGATCAGGTTACGTTTCTATCTGATAGGTAATTGTCATCCGTAAAACAGTGTTGTACTCAGGATGTCGTTCAATCGCTACATCTATGTATTTAGAACTGTAAACTTTTTCTCTCTCTTTCTTTCAGAGATATGTTTGAGCAGGCTGAGCAGGACATGCCTCATGCCATTAATGTCACCCCAGCTGAACAGGCAGCCATTGAACGAGTATGAACTCTATATTCCTTGAGTTCTTTAAACTGTATTTATGATGTACTTAGCTTTTTACTTGTTCCCTTTTGTAGCTCGAGGCAATGGGATTTGATAGAGCCTCAGTCATCGAGGCATTTTTGGCGTGTGATCGCAATGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGAT

mRNA sequence

GTTATGGCTGTCAAGAAAAATATTGAAGATATACAAGGAAAGGATAATTATCCTTGTGGTCAGCAATTATTGATTCACAACGGGAAAGTTCTGAAAGATGAAAGTACTCTGGCAGAAAACAAAGTATCCGAAGAGGGCTTTCTAGTTGTAATGCTCAGCAAGGTAATCTTTGTCCTCGACTCAGGTAATATTTGCTCATTCTCGTTGCCAATTGGTTATTATTTTCTCATGTTAACCTCCTTTGGAACCTTTTTTTTGCAGCCTGCTCAAAGCCCTCCTGTAGCTCAACCAGTTTTAAATTCAACTCCGACAACTCAAGTGACACCATCACCGACTCCTGCACTCCAAGCTCCCACGCAAGCACCGTCGTCTGTGCAGACAGATACATATGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAACCTGGAACAGACTATTCAACAAATAATGGATATGGGGGGTGGCAATTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCTTATAATAATCCAGAGCGAGCAGTGGACTACTTGTACTCTGTATAAACAGCAGAAGTTGCAGTCCCAGTGGCTCGCTTCGGTTCTGGTCAAGCCACTGAAACTGATGCATCTCTCGCTGCACCTGCCTCTGGAGCACCTAACACAGCCCCCTTAAATATGTTTCCTCAGGAGGCCCTTTCTGGTGGTGGTGGTGGTGGTGGTGGTAACCTTGGATCTCTTGAATTCCTTAGAAACAATCCTCAGTTCCAAGCCCTGCGAACGATGGTGCATACAAATCCTCAGATCTTACAGCCCATGCTTCAAGAACTTGGCAAGCAGAATCCCCAGCTCTTGAGACTCATTCAAGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTCTCGACAATTTTGAGGGAGATATGTTTGAGCAGGCTGAGCAGGACATGCCTCATGCCATTAATGTCACCCCAGCTGAACAGGCAGCCATTGAACGACTCGAGGCAATGGGATTTGATAGAGCCTCAGTCATCGAGGCATTTTTGGCGTGTGATCGCAATGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGAT

Coding sequence (CDS)

GTTATGGCTGTCAAGAAAAATATTGAAGATATACAAGGAAAGGATAATTATCCTTGTGGTCAGCAATTATTGATTCACAACGGGAAAGTTCTGAAAGATGAAAGTACTCTGGCAGAAAACAAAGTATCCGAAGAGGGCTTTCTAGTTGTAATGCTCAGCAAGGTAATCTTTGTCCTCGACTCAGGTAATATTTGCTCATTCTCGTTGCCAATTGGTTATTATTTTCTCATGTTAACCTCCTTTGGAACCTTTTTTTTGCAGCCTGCTCAAAGCCCTCCTGTAGCTCAACCAGTTTTAAATTCAACTCCGACAACTCAAGTGACACCATCACCGACTCCTGCACTCCAAGCTCCCACGCAAGCACCGTCGTCTGTGCAGACAGATACATATGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAACCTGGAACAGACTATTCAACAAATAATGGATATGGGGGGTGGCAATTGGGACAGAGAAACAGTTGTTCGTGCACTAAGAGCTGCTTATAATAATCCAGAGCGAGCAGTGGACTACTTGTACTCTGTATAAACAGCAGAAGTTGCAGTCCCAGTGGCTCGCTTCGGTTCTGGTCAAGCCACTGAAACTGATGCATCTCTCGCTGCACCTGCCTCTGGAGCACCTAACACAGCCCCCTTAAATATGTTTCCTCAGGAGGCCCTTTCTGGTGGTGGTGGTGGTGGTGGTGGTAACCTTGGATCTCTTGAATTCCTTAGAAACAATCCTCAGTTCCAAGCCCTGCGAACGATGGTGCATACAAATCCTCAGATCTTACAGCCCATGCTTCAAGAACTTGGCAAGCAGAATCCCCAGCTCTTGAGACTCATTCAAGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTCTCGACAATTTTGAGGGAGATATGTTTGAGCAGGCTGAGCAGGACATGCCTCATGCCATTAATGTCACCCCAGCTGAACAGGCAGCCATTGAACGACTCGAGGCAATGGGATTTGATAGAGCCTCAGTCATCGAGGCATTTTTGGCGTGTGATCGCAATGAGGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGAT

Protein sequence

VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLDSGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQAPSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSVUTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACDRNEELAANYLLENSGDFD

Homology

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BLAST of MC08g0928 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 434.1 bits (1115), Expect = 1.6e-120
Identity = 245/377 (64.99%), Postives = 283/377 (75.07%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           +MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L ENKV+EEGFLVVMLSK      
Sbjct: 23  IMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSK------ 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQ------VTPSPTPA 120
                              S G+      Q+  V+QPV  +T +T+         SP PA
Sbjct: 83  -----------------SKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPA 142

Query: 121 LQAPTQAPSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNP 180
              P Q   + QTDTYGQAAS LV+G++LEQ +QQIM+MGGG+WD+ETV RALRAAYNNP
Sbjct: 143 SPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNP 202

Query: 181 ERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNMFPQEALSGG 240
           ERAVDYLYS    TAEVAVPV      Q   + A+  APASG PN++PL++FPQE ++  
Sbjct: 203 ERAVDYLYSGIPQTAEVAVPVP---EAQIAGSGAAPVAPASGGPNSSPLDLFPQETVA-- 262

Query: 241 GGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFL 300
              G G+LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLLRLIQ++ AEFL
Sbjct: 263 -AAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFL 322

Query: 301 QLINEPLD--NFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACDR 360
           QL+NEP +  + EGDMF+Q EQ+MPHAINVTPAEQ AI+RLEAMGFDRA VIEAFLACDR
Sbjct: 323 QLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDR 370

Query: 361 NEELAANYLLENSGDFD 368
           NEELAANYLLENSGDF+
Sbjct: 383 NEELAANYLLENSGDFE 370

[Close]

BLAST of MC08g0928 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 403.7 bits (1036), Expect = 2.3e-111
Identity = 225/370 (60.81%), Postives = 271/370 (73.24%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           +MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDE+TL ENKV+EEGFLVVMLSK      
Sbjct: 23  IMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSKTASS 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
           +G   S + P       ++S  T    P+ +  +A P  NST               P Q
Sbjct: 83  AGP--SSTQPTSTTTSTISS--TTLAAPSTTQSIAVPASNST---------------PVQ 142

Query: 121 APSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDY 180
              + Q+DTYGQAAS LV+G+++EQ +QQIM+MGGG+WD+ETV RALRAAYNNPERAVDY
Sbjct: 143 EQPTAQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDY 202

Query: 181 LYSVXTAEVAVPVARF-GSGQATETDASLAAPASGAPNTAPLNMFPQEALSGGGGGGGGN 240
           LYS     V +P     G G   E     A P SG PN++PL++FPQEA+S      GG+
Sbjct: 203 LYSGIPETVTIPATNLSGVGSGREL---TAPPPSGGPNSSPLDLFPQEAVS---DAAGGD 262

Query: 241 LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPL 300
           LG+LEFLR N QFQ LR+MV++NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP 
Sbjct: 263 LGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPY 322

Query: 301 DNFEG--DMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACDRNEELAAN 360
           +  +G  D+F+Q +Q+MPH++NVTP EQ +IERLEAMGFDRA VIEAFL+CDRNEELAAN
Sbjct: 323 EGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAAN 367

Query: 361 YLLENSGDFD 368
           YLLE+S DF+
Sbjct: 383 YLLEHSADFE 367

[Close]

BLAST of MC08g0928 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 329.7 bits (844), Expect = 4.2e-89
Identity = 193/375 (51.47%), Postives = 239/375 (63.73%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           V  VK  IE ++G + YP  +Q+LIH GKVLKDE+TL EN V E  F+V+MLSK      
Sbjct: 23  VSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLEENNVVENSFIVIMLSKTKASPS 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
             +  S   P                   Q   VA P +++   +   P+   A  A   
Sbjct: 83  GASTASAPAP----------------SATQPQTVATPQVSAPTASVPVPTSGTATAAAPA 142

Query: 121 APSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDY 180
             +SVQTD YGQAASNLVAG  LE T+QQI+DMGGG+WDR+TVVRALRAA+NNPERAV+Y
Sbjct: 143 TAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEY 202

Query: 181 LYSVXTAEVAVPVARFGSGQATETDASLAAP--------ASGAPNTAPLNMFPQEALSGG 240
           LYS   A+  +P          +    LA P        A+G PN  PLN+FPQ   +  
Sbjct: 203 LYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPAAATGGPNANPLNLFPQGMPAAD 262

Query: 241 GGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFL 300
            G G GN   L+FLRN+ QFQALR MV  NPQILQPMLQELGKQNPQL+RLIQ+H A+FL
Sbjct: 263 AGAGAGN---LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFL 322

Query: 301 QLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACDRNE 360
           +LINEP++  E ++ EQ E  MP A+ VTP E+ AIERLE MGFDRA V+E F AC++NE
Sbjct: 323 RLINEPVEG-EENVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNE 376

Query: 361 ELAANYLLENSGDFD 368
           ELAANYLL++  +F+
Sbjct: 383 ELAANYLLDHMHEFE 376

[Close]

BLAST of MC08g0928 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 322.0 bits (824), Expect = 8.7e-87
Identity = 206/402 (51.24%), Postives = 251/402 (62.44%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           V+ VKKNIE +QG D YP  +Q+LIH GKVLKDE+T+ ENKV+E  F+V+M++K      
Sbjct: 23  VVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFIVIMMNKSKPASA 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQ------------PAQSPPVA-----QPVLNSTP 120
           + +  S            TS  +   Q            P + PP A      PV  +  
Sbjct: 83  AASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATET 142

Query: 121 TTQVTPSPTPA-----LQAPTQAPSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNW 180
            T   P P PA       AP  AP   Q D YGQAASNL AG+NLE TIQQI+DMGGG W
Sbjct: 143 VTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASNLAAGSNLESTIQQILDMGGGTW 202

Query: 181 DRETVVRALRAAYNNPERAVDYLYSVXTAEVAV-PVAR--FGSGQ----ATETDASLAAP 240
           DRETVV ALRAA+NNPERAV+YLY+    +  V PVAR    +GQ      +T    AAP
Sbjct: 203 DRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVARPPASAGQPANPPAQTQQPAAAP 262

Query: 241 ASGAPNTAPLNMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQ 300
           ASG PN  PL++FPQ   + GG  G    G+L+FLRN+ QFQALR MV  NPQ+LQPMLQ
Sbjct: 263 ASG-PNANPLDLFPQGLPNVGGNPGA---GTLDFLRNSQQFQALRAMVQANPQVLQPMLQ 322

Query: 301 ELGKQNPQLLRLIQDHHAEFLQLINEPLD------NFEGDMFEQAEQDMPHAINVTPAEQ 360
           ELGKQNP L+RLIQDH A+FL+LINEP++      N  G M   A    P AI VT  E+
Sbjct: 323 ELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQM--AAGMPQPQAIQVTHEER 382

Query: 361 AAIERLEAMGFDRASVIEAFLACDRNEELAANYLLENSGDFD 368
            AIERLEAMGF+RA V+E F AC++NEELAANYLL++  +F+
Sbjct: 383 EAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFE 418

[Close]

BLAST of MC08g0928 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 6.7e-79
Identity = 188/378 (49.74%), Postives = 238/378 (62.96%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           V  VK+ IE  QG+  YP  QQ+LIH GKVLKD++TL ENKV E  FLV+ML +      
Sbjct: 23  VADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLDENKVLENSFLVIMLRQ-----G 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQ----PVLNSTPTTQVTPSPTPALQ 120
            G+  S                T    PA   PVA     PV  S PT   T SP PA+ 
Sbjct: 83  KGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVPVTVSAPTPTATASPAPAVA 142

Query: 121 APTQAPSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPER 180
             ++A      D YGQA SNLVAG+NLE TIQ I++MGGG WDR+ V+ AL AA+NNPER
Sbjct: 143 VSSEA------DNYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPER 202

Query: 181 AVDYLYSVXTAEVAVPVARFGSGQATETDASL----AAPA--SGAPNTAPLNMFPQEALS 240
           AV+YLYS    ++ +PV       A  T AS     AAP+  S  PN +PL++FPQ AL 
Sbjct: 203 AVEYLYSGVPEQMDIPVPPPSIQPANPTQASQATQPAAPSILSSGPNASPLDLFPQ-ALP 262

Query: 241 GGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAE 300
                  G LG+L+ LRNN QF+ L ++V  NPQILQP+LQELGKQNPQ+L+LIQ++ AE
Sbjct: 263 NASTDAAG-LGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAE 322

Query: 301 FLQLINEPLD-NFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACD 360
           FL LINEP + + E ++ +Q  + MP  I VTP E  AI RLEAMGFDRA V++ F AC+
Sbjct: 323 FLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACN 382

Query: 361 RNEELAANYLLENSGDFD 368
           ++E+LAANYLL++  +FD
Sbjct: 383 KDEQLAANYLLDHMNEFD 387

[Close]

BLAST of MC08g0928 vs. NCBI nr
Match: XP_022153480.1 (ubiquitin receptor RAD23b-like [Momordica charantia])

HSP 1 Score: 615 bits (1587), Expect = 6.42e-220
Identity = 336/384 (87.50%), Postives = 338/384 (88.02%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK      
Sbjct: 23  VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKS---KT 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
           SG++                 G    QPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ
Sbjct: 83  SGSV-----------------GQSSTQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 142

Query: 121 APSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR 180
           APSS               VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR
Sbjct: 143 APSSAPRNTTSTSDRVADNVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR 202

Query: 181 ALRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM 240
           ALRAAYNNPERAVDYLYS    TAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM
Sbjct: 203 ALRAAYNNPERAVDYLYSGIPETAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM 262

Query: 241 FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 300
           FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL
Sbjct: 263 FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 322

Query: 301 IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE 360
           IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE
Sbjct: 323 IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE 382

Query: 361 AFLACDRNEELAANYLLENSGDFD 367
           AFLACDRNEELAANYLLENSGDFD
Sbjct: 383 AFLACDRNEELAANYLLENSGDFD 386

[Close]

BLAST of MC08g0928 vs. NCBI nr
Match: XP_008462953.1 (PREDICTED: ubiquitin receptor RAD23b isoform X1 [Cucumis melo])

HSP 1 Score: 583 bits (1503), Expect = 3.95e-207
Identity = 315/384 (82.03%), Postives = 326/384 (84.90%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           VMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK      
Sbjct: 23  VMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSAS 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
           +G   +                    QPAQ+PPVAQPVL+STP  QVTPSPTPA QAPTQ
Sbjct: 83  AGQSST--------------------QPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAPTQ 142

Query: 121 APSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR 180
           APSS               VQTDTYGQAASNLVAGNNLEQT+QQ+MDMGGG WDRETVVR
Sbjct: 143 APSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETVVR 202

Query: 181 ALRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM 240
           ALRAAYNNPERAVDYLYS    +AEVAVPV RFGSGQATETDAS+ AP SGAPNTAPLNM
Sbjct: 203 ALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNM 262

Query: 241 FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 300
           FPQEALS GGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL
Sbjct: 263 FPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 322

Query: 301 IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE 360
           IQDHHAEFLQLINEP+DNFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA VIE
Sbjct: 323 IQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIE 382

Query: 361 AFLACDRNEELAANYLLENSGDFD 367
           AFLACDRNEELAANYLLENSGDFD
Sbjct: 383 AFLACDRNEELAANYLLENSGDFD 386

[Close]

BLAST of MC08g0928 vs. NCBI nr
Match: XP_008462954.1 (PREDICTED: ubiquitin receptor RAD23b isoform X2 [Cucumis melo] >KAA0034942.1 ubiquitin receptor RAD23b isoform X1 [Cucumis melo var. makuwa] >TYK21297.1 ubiquitin receptor RAD23b isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 582 bits (1499), Expect = 6.93e-207
Identity = 314/383 (81.98%), Postives = 325/383 (84.86%), Query Frame = 0


Query: 2   MAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLDS 61
           MAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK      +
Sbjct: 1   MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSASA 60

Query: 62  GNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQA 121
           G   +                    QPAQ+PPVAQPVL+STP  QVTPSPTPA QAPTQA
Sbjct: 61  GQSST--------------------QPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAPTQA 120

Query: 122 PSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRA 181
           PSS               VQTDTYGQAASNLVAGNNLEQT+QQ+MDMGGG WDRETVVRA
Sbjct: 121 PSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETVVRA 180

Query: 182 LRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNMF 241
           LRAAYNNPERAVDYLYS    +AEVAVPV RFGSGQATETDAS+ AP SGAPNTAPLNMF
Sbjct: 181 LRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNMF 240

Query: 242 PQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI 301
           PQEALS GGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI
Sbjct: 241 PQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI 300

Query: 302 QDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEA 361
           QDHHAEFLQLINEP+DNFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA VIEA
Sbjct: 301 QDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEA 360

Query: 362 FLACDRNEELAANYLLENSGDFD 367
           FLACDRNEELAANYLLENSGDFD
Sbjct: 361 FLACDRNEELAANYLLENSGDFD 363

[Close]

BLAST of MC08g0928 vs. NCBI nr
Match: XP_038906275.1 (ubiquitin receptor RAD23b-like [Benincasa hispida])

HSP 1 Score: 580 bits (1495), Expect = 6.53e-206
Identity = 317/384 (82.55%), Postives = 324/384 (84.38%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           VMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK      
Sbjct: 23  VMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK------ 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
                  S   G       S G    QPAQ+PPVAQP+LNST  TQVTPSPTPA QAPTQ
Sbjct: 83  -------SKASG-------SAGQSSTQPAQNPPVAQPILNSTSATQVTPSPTPAPQAPTQ 142

Query: 121 APSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR 180
           APSS               VQTDTYGQAASNLVAGNNLEQTIQQ+MDMGGGNWDRETVVR
Sbjct: 143 APSSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETVVR 202

Query: 181 ALRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM 240
           ALRAAYNNPERAVDYLYS    +AEVAVPV RFGSGQATETD SL AP SGAPNTAPLNM
Sbjct: 203 ALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDTSLPAPVSGAPNTAPLNM 262

Query: 241 FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 300
           FPQEALS GGG G GNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL
Sbjct: 263 FPQEALSAGGGSGSGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 322

Query: 301 IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE 360
           IQDHH EFLQLINEP+DNFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA VIE
Sbjct: 323 IQDHHTEFLQLINEPIDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIE 382

Query: 361 AFLACDRNEELAANYLLENSGDFD 367
           AFLACDRNEELAANYLLENSGDFD
Sbjct: 383 AFLACDRNEELAANYLLENSGDFD 386

[Close]

BLAST of MC08g0928 vs. NCBI nr
Match: XP_011651807.2 (ubiquitin receptor RAD23b [Cucumis sativus] >KAE8650953.1 hypothetical protein Csa_002067 [Cucumis sativus])

HSP 1 Score: 575 bits (1482), Expect = 1.03e-203
Identity = 315/398 (79.15%), Postives = 327/398 (82.16%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           VMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK    + 
Sbjct: 23  VMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSVS 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQ---- 120
           +G   +                    QPAQ+PPVAQPVL+STP  QVTPSPTPA Q    
Sbjct: 83  AGQSST--------------------QPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVTPS 142

Query: 121 ----------APTQAPSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIM 180
                     APTQAPSS               VQTDTYGQAASNLVAGNNLEQT+QQ+M
Sbjct: 143 PTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQLM 202

Query: 181 DMGGGNWDRETVVRALRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLA 240
           DMGGGNWDRETVVRALRAAYNNPERAVDYLYS    +AEVAVPV RFGSGQATETDAS+ 
Sbjct: 203 DMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVP 262

Query: 241 APASGAPNTAPLNMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
           AP SGAPNTAPLNMFPQEALS G GGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPM
Sbjct: 263 APVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 322

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIE 360
           LQELGKQNPQLLRLIQDHHAEFLQLINEP+DNFEG+MFEQAE DMPHAINVTPAEQAAIE
Sbjct: 323 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIE 382

Query: 361 RLEAMGFDRASVIEAFLACDRNEELAANYLLENSGDFD 367
           RLEAMGFDRA VIEAFLACDRNEELAANYLLENSGDFD
Sbjct: 383 RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFD 400

[Close]

BLAST of MC08g0928 vs. ExPASy TrEMBL
Match: A0A6J1DGY9 (Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=1)

HSP 1 Score: 615 bits (1587), Expect = 3.11e-220
Identity = 336/384 (87.50%), Postives = 338/384 (88.02%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK      
Sbjct: 23  VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKS---KT 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
           SG++                 G    QPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ
Sbjct: 83  SGSV-----------------GQSSTQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 142

Query: 121 APSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR 180
           APSS               VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR
Sbjct: 143 APSSAPRNTTSTSDRVADNVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR 202

Query: 181 ALRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM 240
           ALRAAYNNPERAVDYLYS    TAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM
Sbjct: 203 ALRAAYNNPERAVDYLYSGIPETAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM 262

Query: 241 FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 300
           FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL
Sbjct: 263 FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 322

Query: 301 IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE 360
           IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE
Sbjct: 323 IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE 382

Query: 361 AFLACDRNEELAANYLLENSGDFD 367
           AFLACDRNEELAANYLLENSGDFD
Sbjct: 383 AFLACDRNEELAANYLLENSGDFD 386

[Close]

BLAST of MC08g0928 vs. ExPASy TrEMBL
Match: A0A1S3CI18 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1)

HSP 1 Score: 583 bits (1503), Expect = 1.91e-207
Identity = 315/384 (82.03%), Postives = 326/384 (84.90%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           VMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK      
Sbjct: 23  VMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSAS 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
           +G   +                    QPAQ+PPVAQPVL+STP  QVTPSPTPA QAPTQ
Sbjct: 83  AGQSST--------------------QPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAPTQ 142

Query: 121 APSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVR 180
           APSS               VQTDTYGQAASNLVAGNNLEQT+QQ+MDMGGG WDRETVVR
Sbjct: 143 APSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETVVR 202

Query: 181 ALRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNM 240
           ALRAAYNNPERAVDYLYS    +AEVAVPV RFGSGQATETDAS+ AP SGAPNTAPLNM
Sbjct: 203 ALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNM 262

Query: 241 FPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 300
           FPQEALS GGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL
Sbjct: 263 FPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRL 322

Query: 301 IQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIE 360
           IQDHHAEFLQLINEP+DNFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA VIE
Sbjct: 323 IQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIE 382

Query: 361 AFLACDRNEELAANYLLENSGDFD 367
           AFLACDRNEELAANYLLENSGDFD
Sbjct: 383 AFLACDRNEELAANYLLENSGDFD 386

[Close]

BLAST of MC08g0928 vs. ExPASy TrEMBL
Match: A0A5A7SUP1 (Ubiquitin receptor RAD23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00050 PE=3 SV=1)

HSP 1 Score: 582 bits (1499), Expect = 3.35e-207
Identity = 314/383 (81.98%), Postives = 325/383 (84.86%), Query Frame = 0


Query: 2   MAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLDS 61
           MAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK      +
Sbjct: 1   MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSASA 60

Query: 62  GNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQA 121
           G   +                    QPAQ+PPVAQPVL+STP  QVTPSPTPA QAPTQA
Sbjct: 61  GQSST--------------------QPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAPTQA 120

Query: 122 PSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRA 181
           PSS               VQTDTYGQAASNLVAGNNLEQT+QQ+MDMGGG WDRETVVRA
Sbjct: 121 PSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETVVRA 180

Query: 182 LRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNMF 241
           LRAAYNNPERAVDYLYS    +AEVAVPV RFGSGQATETDAS+ AP SGAPNTAPLNMF
Sbjct: 181 LRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNMF 240

Query: 242 PQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI 301
           PQEALS GGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI
Sbjct: 241 PQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI 300

Query: 302 QDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEA 361
           QDHHAEFLQLINEP+DNFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA VIEA
Sbjct: 301 QDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEA 360

Query: 362 FLACDRNEELAANYLLENSGDFD 367
           FLACDRNEELAANYLLENSGDFD
Sbjct: 361 FLACDRNEELAANYLLENSGDFD 363

[Close]

BLAST of MC08g0928 vs. ExPASy TrEMBL
Match: A0A1S3CIK2 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1)

HSP 1 Score: 582 bits (1499), Expect = 3.35e-207
Identity = 314/383 (81.98%), Postives = 325/383 (84.86%), Query Frame = 0


Query: 2   MAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLDS 61
           MAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK      +
Sbjct: 1   MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSASA 60

Query: 62  GNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQA 121
           G   +                    QPAQ+PPVAQPVL+STP  QVTPSPTPA QAPTQA
Sbjct: 61  GQSST--------------------QPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAPTQA 120

Query: 122 PSS---------------VQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRA 181
           PSS               VQTDTYGQAASNLVAGNNLEQT+QQ+MDMGGG WDRETVVRA
Sbjct: 121 PSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETVVRA 180

Query: 182 LRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNMF 241
           LRAAYNNPERAVDYLYS    +AEVAVPV RFGSGQATETDAS+ AP SGAPNTAPLNMF
Sbjct: 181 LRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPLNMF 240

Query: 242 PQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI 301
           PQEALS GGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI
Sbjct: 241 PQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLI 300

Query: 302 QDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEA 361
           QDHHAEFLQLINEP+DNFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA VIEA
Sbjct: 301 QDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEA 360

Query: 362 FLACDRNEELAANYLLENSGDFD 367
           FLACDRNEELAANYLLENSGDFD
Sbjct: 361 FLACDRNEELAANYLLENSGDFD 363

[Close]

BLAST of MC08g0928 vs. ExPASy TrEMBL
Match: A0A0A0LF05 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1)

HSP 1 Score: 580 bits (1495), Expect = 3.66e-206
Identity = 313/388 (80.67%), Postives = 327/388 (84.28%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           VMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSK    + 
Sbjct: 23  VMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSVS 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
           +G   +                    QPAQ+PPVAQPVL+STP  QVTPSPTPA QAPTQ
Sbjct: 83  AGQSST--------------------QPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAPTQ 142

Query: 121 APS-------------------SVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRE 180
           AP+                   +VQTDTYGQAASNLVAGNNLEQT+QQ+MDMGGGNWDRE
Sbjct: 143 APTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRE 202

Query: 181 TVVRALRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTA 240
           TVVRALRAAYNNPERAVDYLYS    +AEVAVPV RFGSGQATETDAS+ AP SGAPNTA
Sbjct: 203 TVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTA 262

Query: 241 PLNMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQ 300
           PLNMFPQEALS G GGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQ
Sbjct: 263 PLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQ 322

Query: 301 LLRLIQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRA 360
           LLRLIQDHHAEFLQLINEP+DNFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA
Sbjct: 323 LLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRA 382

Query: 361 SVIEAFLACDRNEELAANYLLENSGDFD 367
            VIEAFLACDRNEELAANYLLENSGDFD
Sbjct: 383 LVIEAFLACDRNEELAANYLLENSGDFD 390

[Close]

BLAST of MC08g0928 vs. TAIR 10
Match: AT1G79650.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-121
Identity = 245/377 (64.99%), Postives = 283/377 (75.07%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           +MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L ENKV+EEGFLVVMLSK      
Sbjct: 23  IMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSK------ 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQ------VTPSPTPA 120
                              S G+      Q+  V+QPV  +T +T+         SP PA
Sbjct: 83  -----------------SKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPA 142

Query: 121 LQAPTQAPSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNP 180
              P Q   + QTDTYGQAAS LV+G++LEQ +QQIM+MGGG+WD+ETV RALRAAYNNP
Sbjct: 143 SPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNP 202

Query: 181 ERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNMFPQEALSGG 240
           ERAVDYLYS    TAEVAVPV      Q   + A+  APASG PN++PL++FPQE ++  
Sbjct: 203 ERAVDYLYSGIPQTAEVAVPVP---EAQIAGSGAAPVAPASGGPNSSPLDLFPQETVA-- 262

Query: 241 GGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFL 300
              G G+LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLLRLIQ++ AEFL
Sbjct: 263 -AAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFL 322

Query: 301 QLINEPLD--NFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACDR 360
           QL+NEP +  + EGDMF+Q EQ+MPHAINVTPAEQ AI+RLEAMGFDRA VIEAFLACDR
Sbjct: 323 QLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDR 370

Query: 361 NEELAANYLLENSGDFD 368
           NEELAANYLLENSGDF+
Sbjct: 383 NEELAANYLLENSGDFE 370

[Close]

BLAST of MC08g0928 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 431.8 bits (1109), Expect = 5.5e-121
Identity = 245/372 (65.86%), Postives = 282/372 (75.81%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           +MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L ENKV+EEGFLVVMLSK      
Sbjct: 23  IMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSK----SK 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVA-QPVLNSTPTTQVTPSPTPALQAPT 120
           SG                 S G   +QP  +   + +P   ST  +    SP PA   P 
Sbjct: 83  SGG----------------SAGQASVQPVSATTSSTKPAAPSTTQS----SPVPASPIPA 142

Query: 121 QAPSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVD 180
           Q   + QTDTYGQAAS LV+G++LEQ +QQIM+MGGG+WD+ETV RALRAAYNNPERAVD
Sbjct: 143 QEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVD 202

Query: 181 YLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNMFPQEALSGGGGGGG 240
           YLYS    TAEVAVPV      Q   + A+  APASG PN++PL++FPQE ++     G 
Sbjct: 203 YLYSGIPQTAEVAVPVP---EAQIAGSGAAPVAPASGGPNSSPLDLFPQETVA---AAGS 262

Query: 241 GNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINE 300
           G+LG+LEFLRNN QFQ LRTMVH+NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NE
Sbjct: 263 GDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNE 322

Query: 301 PLD--NFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACDRNEELA 360
           P +  + EGDMF+Q EQ+MPHAINVTPAEQ AI+RLEAMGFDRA VIEAFLACDRNEELA
Sbjct: 323 PYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELA 364

Query: 361 ANYLLENSGDFD 368
           ANYLLENSGDF+
Sbjct: 383 ANYLLENSGDFE 364

[Close]

BLAST of MC08g0928 vs. TAIR 10
Match: AT1G79650.4 (Rad23 UV excision repair protein family )

HSP 1 Score: 422.2 bits (1084), Expect = 4.4e-118
Identity = 246/401 (61.35%), Postives = 284/401 (70.82%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           +MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L ENKV+EEGFLVVMLSK      
Sbjct: 23  IMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSK------ 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQ------VTPSPTPA 120
                              S G+      Q+  V+QPV  +T +T+         SP PA
Sbjct: 83  -----------------SKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPA 142

Query: 121 LQAPTQAPSSV------------------------QTDTYGQAASNLVAGNNLEQTIQQI 180
              P Q   +V                        QTDTYGQAAS LV+G++LEQ +QQI
Sbjct: 143 SPIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQQI 202

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYS--VXTAEVAVPVARFGSGQATETDASL 240
           M+MGGG+WD+ETV RALRAAYNNPERAVDYLYS    TAEVAVPV      Q   + A+ 
Sbjct: 203 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPVP---EAQIAGSGAAP 262

Query: 241 AAPASGAPNTAPLNMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
            APASG PN++PL++FPQE ++     G G+LG+LEFLRNN QFQ LRTMVH+NPQILQP
Sbjct: 263 VAPASGGPNSSPLDLFPQETVA---AAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQP 322

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPLD--NFEGDMFEQAEQDMPHAINVTPAEQA 360
           MLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  + EGDMF+Q EQ+MPHAINVTPAEQ 
Sbjct: 323 MLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQE 382

Query: 361 AIERLEAMGFDRASVIEAFLACDRNEELAANYLLENSGDFD 368
           AI+RLEAMGFDRA VIEAFLACDRNEELAANYLLENSGDF+
Sbjct: 383 AIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 394

[Close]

BLAST of MC08g0928 vs. TAIR 10
Match: AT1G16190.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 403.7 bits (1036), Expect = 1.6e-112
Identity = 225/370 (60.81%), Postives = 271/370 (73.24%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           +MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDE+TL ENKV+EEGFLVVMLSK      
Sbjct: 23  IMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSKTASS 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAPTQ 120
           +G   S + P       ++S  T    P+ +  +A P  NST               P Q
Sbjct: 83  AGP--SSTQPTSTTTSTISS--TTLAAPSTTQSIAVPASNST---------------PVQ 142

Query: 121 APSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDY 180
              + Q+DTYGQAAS LV+G+++EQ +QQIM+MGGG+WD+ETV RALRAAYNNPERAVDY
Sbjct: 143 EQPTAQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDY 202

Query: 181 LYSVXTAEVAVPVARF-GSGQATETDASLAAPASGAPNTAPLNMFPQEALSGGGGGGGGN 240
           LYS     V +P     G G   E     A P SG PN++PL++FPQEA+S      GG+
Sbjct: 203 LYSGIPETVTIPATNLSGVGSGREL---TAPPPSGGPNSSPLDLFPQEAVS---DAAGGD 262

Query: 241 LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPL 300
           LG+LEFLR N QFQ LR+MV++NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP 
Sbjct: 263 LGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPY 322

Query: 301 DNFEG--DMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACDRNEELAAN 360
           +  +G  D+F+Q +Q+MPH++NVTP EQ +IERLEAMGFDRA VIEAFL+CDRNEELAAN
Sbjct: 323 EGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAAN 367

Query: 361 YLLENSGDFD 368
           YLLE+S DF+
Sbjct: 383 YLLEHSADFE 367

[Close]

BLAST of MC08g0928 vs. TAIR 10
Match: AT1G79650.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 386.3 bits (991), Expect = 2.7e-107
Identity = 227/377 (60.21%), Postives = 264/377 (70.03%), Query Frame = 0


Query: 1   VMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKVIFVLD 60
           +MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L ENKV+EEGFLVVMLSK      
Sbjct: 23  IMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSK------ 82

Query: 61  SGNICSFSLPIGYYFLMLTSFGTFFLQPAQSPPVAQPVLNSTPTTQ------VTPSPTPA 120
                              S G+      Q+  V+QPV  +T +T+         SP PA
Sbjct: 83  -----------------SKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPA 142

Query: 121 LQAPTQAPSSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNP 180
              P Q   + QTDTYGQAAS LV+G++LEQ +QQIM+MGGG+WD+ETV RALRAAYNNP
Sbjct: 143 SPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNP 202

Query: 181 ERAVDYLYS--VXTAEVAVPVARFGSGQATETDASLAAPASGAPNTAPLNMFPQEALSGG 240
           ERAVDYLYS    TAEVAVPV      Q   + A+  APASG PN++PL++FPQE ++  
Sbjct: 203 ERAVDYLYSGIPQTAEVAVPVP---EAQIAGSGAAPVAPASGGPNSSPLDLFPQETVA-- 262

Query: 241 GGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFL 300
              G G+LG+LEFLRNN                     QELGKQNPQLLRLIQ++ AEFL
Sbjct: 263 -AAGSGDLGTLEFLRNND--------------------QELGKQNPQLLRLIQENQAEFL 322

Query: 301 QLINEPLD--NFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASVIEAFLACDR 360
           QL+NEP +  + EGDMF+Q EQ+MPHAINVTPAEQ AI+RLEAMGFDRA VIEAFLACDR
Sbjct: 323 QLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDR 350

Query: 361 NEELAANYLLENSGDFD 368
           NEELAANYLLENSGDF+
Sbjct: 383 NEELAANYLLENSGDFE 350

The following BLAST results are available for this feature:

BLAST of MC08g0928 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L33	1.6e-120	64.99	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	2.3e-111	60.81	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]
Q84L30	4.2e-89	51.47	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q84L31	8.7e-87	51.24	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q40742	6.7e-79	49.74	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of MC08g0928 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153480.1	6.42e-220	87.50	ubiquitin receptor RAD23b-like [Momordica charantia]	[more]
XP_008462953.1	3.95e-207	82.03	PREDICTED: ubiquitin receptor RAD23b isoform X1 [Cucumis melo]	[more]
XP_008462954.1	6.93e-207	81.98	PREDICTED: ubiquitin receptor RAD23b isoform X2 [Cucumis melo] >KAA0034942.1 ubi...	[more]
XP_038906275.1	6.53e-206	82.55	ubiquitin receptor RAD23b-like [Benincasa hispida]	[more]
XP_011651807.2	1.03e-203	79.15	ubiquitin receptor RAD23b [Cucumis sativus] >KAE8650953.1 hypothetical protein C...	[more]

BLAST of MC08g0928 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGY9	3.11e-220	87.50	Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=...	[more]
A0A1S3CI18	1.91e-207	82.03	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1	[more]
A0A5A7SUP1	3.35e-207	81.98	Ubiquitin receptor RAD23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CIK2	3.35e-207	81.98	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1	[more]
A0A0A0LF05	3.66e-206	80.67	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1	[more]

BLAST of MC08g0928 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79650.1	1.1e-121	64.99	Rad23 UV excision repair protein family	[more]
AT1G79650.2	5.5e-121	65.86	Rad23 UV excision repair protein family	[more]
AT1G79650.4	4.4e-118	61.35	Rad23 UV excision repair protein family	[more]
AT1G16190.1	1.6e-112	60.81	Rad23 UV excision repair protein family	[more]
AT1G79650.3	2.7e-107	60.21	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 317..333 score: 62.3 coord: 334..348 score: 61.21 coord: 268..290 score: 59.68 coord: 349..364 score: 62.78
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..366 e-value: 4.3E-102 score: 340.1
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 143..183 e-value: 1.9E-6 score: 37.4 coord: 323..360 e-value: 5.2E-7 score: 39.3
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 323..358 e-value: 2.4E-11 score: 43.3 coord: 143..181 e-value: 1.1E-15 score: 57.1
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 141..184 score: 12.402311
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 321..361 score: 14.763827
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 240..283 e-value: 3.3E-7 score: 40.0
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 233..297 e-value: 3.2E-27 score: 95.9
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 239..305
None	No IPR available	GENE3D	3.10.20.90		coord: 1..55 e-value: 1.6E-14 score: 55.5
None	No IPR available	GENE3D	1.10.8.10		coord: 136..184 e-value: 4.6E-20 score: 73.2
None	No IPR available	GENE3D	1.10.8.10		coord: 314..362 e-value: 1.5E-23 score: 84.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..234
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 80..366
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 80..366
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..55
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 1..55
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..52 e-value: 5.24775E-16 score: 69.8934
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 242..297 e-value: 3.1E-23 score: 81.3
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..54 e-value: 7.2E-8 score: 32.1
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..54 score: 12.4003
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 304..365
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 140..183
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g0928.1	MC08g0928.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding