MC08g0764 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g0764
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	SKP1-like protein
Location	MC08: 6221142 .. 6223716 (-)
RNA-Seq Expression	MC08g0764
Synteny	MC08g0764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGAAATAAAAACTAATTAATAAAAATAACATTTACAAACTTTATTTTTCAAAATAGAAGACAAAAAATAAAATAGTCGTAGGAGATCTTATCTCAAATTTCTAACACCTATCATCGATATGTATGAATTAAAAATGTTTTTTGAAAGTAGGAGAGGAAAAAATAAATATCGGGTCGGTCCATATATAAAAACGGAGTGGGTAATGGGTGATTATATTCAAACCCATTCTGTGGTGAGTTTCCGTTTTGTTCCACAACTTCTCTGGTTTTGGAGACCTCGCCGAATCCTCCACAATCGAAATACGCGCACCATCATCATGTCTTCAGCAAGGAAGATCACCTTGAAGAGCTCCGATGGCGAGATCTTCGAGGTCGACGAAGCGGTGGCCTTGGAGTCGCAGACCATCAAGCACATGATCGAAGACGATTGCGCCGACAGTGGAATACCCCTCCCTAACGTAAACAGCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCGAGTCCCCCAAGCCCGAGGACCGCGCCGCCTCTGTCGACGACGACCTCAAGACTTGGGACACCGAATTCGTCAAAGTCGACCAGGCCACCCTTTTCGATCTCATCTTGGTTTGTCGATTTCTTCCTCTTTCTTTCTTCTTTTATCTTGGGGGCTCTGTTTTTATGCCCTCCGATTGCTTGTTTAGTCTTTTTTTTTTTTTGGTTAATTAGGGGTCTAGGGTTTCGTTTCGGTGCTTCTTTGATTTGGGGTTCGATTCTTTCGGTTCTTGCTTCGATGCTTACTTGGTTATAGTAGAAAGTAGATATCGCTATTTGTGTATGGGATATTGCTGAATTTACTGAATCTTGAAGACCACCTGCAGAAATAGATGATATGGATAGCTTTATTTTCTAGCGGGAGTCGCTAGGGGAGAACTCTTTTTTATTCAAGGGGTTTTGTATCGAAGGGCTTGATATATAAGGCGTTTGGTTCCGATCTTAGTTAGGAATTGTACCACTGAATCATGCGCTGTGTATTTCCTGTTTGTCGAATGATGATATTCTTTGACTACCAGGAATAGCCATACCGAGTAGTGTTCCAATAAACGTTCAACTTGTTTAAACTGTTCTATCCGATCCAATCTTTTTAAGTTTTGGGTGGGGCACGGTAGTATTGTTTAGTTTAGCAACTTTGGCTGAGGTAATTGGATATAAATTGCTTCTCTTCGGGTGGAATATGGGTGGTTTTCTTTTCTTTTTTTTTTTCCCTTGTCGAACTTGATCTTCCTGCATTGTTCAGATTTTAATATGAGTTTTTTACTGCTTCTGATCATTTGTAATAATATTTACTTGAAGGTGAAACCCCAAGTTTGTTTACTCATTTTGAAGTTTTTCTTTTTTGACTCTTGCTAATCATATGATAGTTATCCTGTCAAGTGTCATTCAATCATGTTTGTGTGTTTCTCTTTTGGTTATGGTTTGTCTGAAATTGATTGGTGGTTCTTAATTGTTTGTAATTGTACTCAGTTAATTACAATGTTTTAAAAGGCTAAAGGCGGCCTCGAGGCTTTTTCTCTTGAAAAGGCAAGGCGTAAGCCTCAAGGCGGTATGAGGCGTAAGCCTCAATTTTAATTAAAAGAATTAAACAAATCCTAAATTTGTGTGGTCAAGTATTACCAAACATAATAGTTATATAAAATTATCAAAATATCCACCTGTTACTTGTCACTCAAAAAAAATTCTAAAAAAACATCATAACATCACTACTATAAAATTCTAAAAAAACATCATAACATCACTACTATAAAATTCTAAAAAAACATCATAACATCACTACTATTATCACCAATAGAACTTACTTATTCTATAAATTATTGTCTTCAATATTTTTTATTTTTAAAGTCCAGGTAGTAAAAGTAGTAATAGATTGAATTGTTACAACTTCTGCTTAGGATTCCATACAAAAAAAACTTGATATTTTTTAAGAATTGGAAAAATTAATAGTATTCCTGTAATCATTACACGAGGCGTATACTTGAAGCCTCAGTGTGTTTTCAAAGAGGCGTAAGCCTCTTCTATGCGAGGCGTAAGCCTCTTATAGTCAAAAGAAGGTGTAAGACTTGAGGCTAAAAGTTAGAGCCTTGCTCTTTTTCATTCCCGCGATTGTTGGTTACTGGATATTCCCATCTCTAACTTGATATGTGATACTGAGACAGGCTGCAAACTATCTCAATATCAAAAGCTTGCTAGATTTGACTTGTCAGACAGTGGCAGACATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACATTTAACATCAAGAATGACTTTACACCCGAGGAAGAGGAGGAGGTTCGTAGGGAGAATCAGTGGGCCTTTGAGTAAAACAAAAAAAATAAACGAGCGAAACGCTTGTATGTTACTTTCTCTTGTTGCATGGTAACGTTTGATCTTTGTTCTACCTGTGTTATGCTAAACCTTGTGATGTCGGTTGGGTGTTTACTTCATTCTACAATCTGTTATATTATTTCATCCAACTTAACTGACTTCGGCATTTTTTTAATACAAGATGAACTCGTGGA

mRNA sequence

TAGGAAATAAAAACTAATTAATAAAAATAACATTTACAAACTTTATTTTTCAAAATAGAAGACAAAAAATAAAATAGTCGTAGGAGATCTTATCTCAAATTTCTAACACCTATCATCGATATGTATGAATTAAAAATGTTTTTTGAAAGTAGGAGAGGAAAAAATAAATATCGGGTCGGTCCATATATAAAAACGGAGTGGGTAATGGGTGATTATATTCAAACCCATTCTGTGGTGAGTTTCCGTTTTGTTCCACAACTTCTCTGGTTTTGGAGACCTCGCCGAATCCTCCACAATCGAAATACGCGCACCATCATCATGTCTTCAGCAAGGAAGATCACCTTGAAGAGCTCCGATGGCGAGATCTTCGAGGTCGACGAAGCGGTGGCCTTGGAGTCGCAGACCATCAAGCACATGATCGAAGACGATTGCGCCGACAGTGGAATACCCCTCCCTAACGTAAACAGCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCGAGTCCCCCAAGCCCGAGGACCGCGCCGCCTCTGTCGACGACGACCTCAAGACTTGGGACACCGAATTCGTCAAAGTCGACCAGGCCACCCTTTTCGATCTCATCTTGGCTGCAAACTATCTCAATATCAAAAGCTTGCTAGATTTGACTTGTCAGACAGTGGCAGACATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACATTTAACATCAAGAATGACTTTACACCCGAGGAAGAGGAGGAGGTTCGTAGGGAGAATCAGTGGGCCTTTGAGTAAAACAAAAAAAATAAACGAGCGAAACGCTTGTATGTTACTTTCTCTTGTTGCATGGTAACGTTTGATCTTTGTTCTACCTGTGTTATGCTAAACCTTGTGATGTCGGTTGGGTGTTTACTTCATTCTACAATCTGTTATATTATTTCATCCAACTTAACTGACTTCGGCATTTTTTTAATACAAGATGAACTCGTGGA

Coding sequence (CDS)

ATGTATGAATTAAAAATGTTTTTTGAAAGTAGGAGAGGAAAAAATAAATATCGGGTCGGTCCATATATAAAAACGGAGTGGGTAATGGGTGATTATATTCAAACCCATTCTGTGGTGAGTTTCCGTTTTGTTCCACAACTTCTCTGGTTTTGGAGACCTCGCCGAATCCTCCACAATCGAAATACGCGCACCATCATCATGTCTTCAGCAAGGAAGATCACCTTGAAGAGCTCCGATGGCGAGATCTTCGAGGTCGACGAAGCGGTGGCCTTGGAGTCGCAGACCATCAAGCACATGATCGAAGACGATTGCGCCGACAGTGGAATACCCCTCCCTAACGTAAACAGCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCGAGTCCCCCAAGCCCGAGGACCGCGCCGCCTCTGTCGACGACGACCTCAAGACTTGGGACACCGAATTCGTCAAAGTCGACCAGGCCACCCTTTTCGATCTCATCTTGGCTGCAAACTATCTCAATATCAAAAGCTTGCTAGATTTGACTTGTCAGACAGTGGCAGACATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACATTTAACATCAAGAATGACTTTACACCCGAGGAAGAGGAGGAGGTTCGTAGGGAGAATCAGTGGGCCTTTGAGTAA

Protein sequence

MYELKMFFESRRGKNKYRVGPYIKTEWVMGDYIQTHSVVSFRFVPQLLWFWRPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE

Homology

[Close]

BLAST of MC08g0764 vs. ExPASy Swiss-Prot
Match: Q9FHW7 (SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.0e-69
Identity = 135/171 (78.95%), Postives = 145/171 (84.80%), Query Frame = 0


Query: 67  MSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 126
           MS+ RKITLKSSDGE FE+DEAVALESQTIKHMIEDDC D+GIPLPNV SKILSKVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 127 KKHVESPKPEDRAA--------------SVDDDLKTWDTEFVKVDQATLFDLILAANYLN 186
           K+HVE+ +  +  A              S D+DLKTWD+EF+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 187 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of MC08g0764 vs. ExPASy Swiss-Prot
Match: Q39255 (SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 8.8e-66
Identity = 126/159 (79.25%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 69  SARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKK 128
           SA+KI LKSSDGE FEV+EAVALESQTI HM+EDDC D+G+PLPNV SKIL+KVIEYCK+
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 129 HVESPKPE----DRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTV 188
           HVE+   +    + AA+ DDDLK WD +F+K+DQATLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 189 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           ADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of MC08g0764 vs. ExPASy Swiss-Prot
Match: Q6PL11 (SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.7e-65
Identity = 131/166 (78.92%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 71  RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHV 130
           + ITLKSSDGE FEV+EAVA+ESQTI+HMIEDDCAD+GIPLPNVNSKILSKVIEYC KHV
Sbjct: 8   KMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHV 67

Query: 131 E-----SPKPEDRAASV--------DDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLL 190
                 + K  D AAS          +DLK WD +FVKVDQATLFDLILAANYLNIK LL
Sbjct: 68  HAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAANYLNIKGLL 127

Query: 191 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEE+RRENQWAFE
Sbjct: 128 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 173

[Close]

BLAST of MC08g0764 vs. ExPASy Swiss-Prot
Match: Q651E8 (SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.9e-62
Identity = 123/165 (74.55%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 73  ITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVE- 132
           ITL+S +G++FEV EAVA+ESQTI+HMIED CAD+GIPLPNV++KILSKVIEYC KHVE 
Sbjct: 11  ITLRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKVIEYCSKHVEA 70

Query: 133 -------------SPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLD 192
                        +P   +   +V+D+LKT+D EFVKVDQ+TLFDLILAANYLNIK LLD
Sbjct: 71  RGGAAAAADGDAPAPAAVEANKAVEDELKTFDAEFVKVDQSTLFDLILAANYLNIKGLLD 130

Query: 193 LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 131 LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 175

[Close]

BLAST of MC08g0764 vs. ExPASy Swiss-Prot
Match: Q9LNT9 (SKP1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=ASK4 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.1e-55
Identity = 109/158 (68.99%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 71  RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHV 130
           + I LKSSDGE FE++EAVA++SQTIKHMIEDDCAD+GIPLPNV   IL+KVIEYCKKHV
Sbjct: 6   KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHV 65

Query: 131 ESP-----KPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 190
           E+        +   ++ +D+LK WD+EFVKVDQ TLFDLILAANYLNI  LLDLTC+ VA
Sbjct: 66  EAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVA 125

Query: 191 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           D ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 126 DQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

[Close]

BLAST of MC08g0764 vs. NCBI nr
Match: XP_022144285.1 (SKP1-like protein 1A [Momordica charantia])

HSP 1 Score: 390 bits (1002), Expect = 2.53e-136
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 29  MGDYIQTHSVVSFRFVPQLLWFWRPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEA 88
           MGDYIQTHSVVSFRFVPQLLWFWRPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEA
Sbjct: 1   MGDYIQTHSVVSFRFVPQLLWFWRPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEA 60

Query: 89  VALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKT 148
           VALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKT
Sbjct: 61  VALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKT 120

Query: 149 WDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 208
           WDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP
Sbjct: 121 WDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 180

Query: 209 EEEEEVRRENQWAFE 223
           EEEEEVRRENQWAFE
Sbjct: 181 EEEEEVRRENQWAFE 195

[Close]

BLAST of MC08g0764 vs. NCBI nr
Match: KAG6598516.1 (SKP1-like protein 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307 bits (786), Expect = 2.06e-102
Identity = 162/185 (87.57%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 40  SFRFVPQLLWFW-RPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEAVALESQTIKH 99
           S RF  Q L    RP RI       T  MS+ RKITLKSSDGEIFEVDEAVALESQTIKH
Sbjct: 80  SLRFATQRLGLGLRPHRIFQKAKYGT--MSAGRKITLKSSDGEIFEVDEAVALESQTIKH 139

Query: 100 MIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKTWDTEFVKVDQ 159
           MIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDR  SVDDDLKTWD+EFVKVDQ
Sbjct: 140 MIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRTGSVDDDLKTWDSEFVKVDQ 199

Query: 160 ATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRREN 219
           ATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRREN
Sbjct: 200 ATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRREN 259

Query: 220 QWAFE 223
           QWAFE
Sbjct: 260 QWAFE 262

[Close]

BLAST of MC08g0764 vs. NCBI nr
Match: KAG7020437.1 (SKP1-like protein 1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304 bits (778), Expect = 4.17e-102
Identity = 160/184 (86.96%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 40  SFRFVPQLLWFWRPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEAVALESQTIKHM 99
           SF F   L  F     +   R  R   MSS RKITLKSSDGEIFEVDEAVALESQTIKHM
Sbjct: 21  SFSFSLSLFGFQTSPNL---RERRYGTMSSGRKITLKSSDGEIFEVDEAVALESQTIKHM 80

Query: 100 IEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKTWDTEFVKVDQA 159
           IEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRA SV+DDLKTWD+EFVKVDQA
Sbjct: 81  IEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAGSVEDDLKTWDSEFVKVDQA 140

Query: 160 TLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQ 219
           TLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQ
Sbjct: 141 TLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQ 200

Query: 220 WAFE 223
           WAFE
Sbjct: 201 WAFE 201

[Close]

BLAST of MC08g0764 vs. NCBI nr
Match: XP_022951749.1 (SKP1-like protein 1B [Cucurbita moschata] >XP_023002536.1 SKP1-like protein 1B [Cucurbita maxima] >XP_023538234.1 SKP1-like protein 1B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302 bits (773), Expect = 5.26e-102
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 67  MSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 126
           MSS RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC
Sbjct: 1   MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 60

Query: 127 KKHVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 186
           KKHVESPKPEDRA SV+DDLKTWD+EFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVESPKPEDRAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 187 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 223
           MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

[Close]

BLAST of MC08g0764 vs. NCBI nr
Match: XP_004143010.1 (SKP1-like protein 1B [Cucumis sativus] >XP_022962289.1 SKP1-like protein 1B [Cucurbita moschata] >XP_022996879.1 SKP1-like protein 1B [Cucurbita maxima] >XP_023546968.1 SKP1-like protein 1B [Cucurbita pepo subsp. pepo] >XP_038886225.1 SKP1-like protein 1B [Benincasa hispida] >KGN62264.1 hypothetical protein Csa_018747 [Cucumis sativus])

HSP 1 Score: 302 bits (773), Expect = 5.26e-102
Identity = 153/157 (97.45%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 67  MSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 126
           MSS RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC
Sbjct: 1   MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 60

Query: 127 KKHVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 186
           KKHVESPKPEDR  SVDDDLKTWD+EFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVESPKPEDRTGSVDDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 187 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 223
           MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

[Close]

BLAST of MC08g0764 vs. ExPASy TrEMBL
Match: A0A6J1CR81 (SKP1-like protein 1A OS=Momordica charantia OX=3673 GN=LOC111014005 PE=3 SV=1)

HSP 1 Score: 390 bits (1002), Expect = 1.22e-136
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 29  MGDYIQTHSVVSFRFVPQLLWFWRPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEA 88
           MGDYIQTHSVVSFRFVPQLLWFWRPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEA
Sbjct: 1   MGDYIQTHSVVSFRFVPQLLWFWRPRRILHNRNTRTIIMSSARKITLKSSDGEIFEVDEA 60

Query: 89  VALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKT 148
           VALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKT
Sbjct: 61  VALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAASVDDDLKT 120

Query: 149 WDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 208
           WDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP
Sbjct: 121 WDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 180

Query: 209 EEEEEVRRENQWAFE 223
           EEEEEVRRENQWAFE
Sbjct: 181 EEEEEVRRENQWAFE 195

[Close]

BLAST of MC08g0764 vs. ExPASy TrEMBL
Match: A0A6J1KLK5 (SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496349 PE=3 SV=1)

HSP 1 Score: 302 bits (773), Expect = 2.54e-102
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 67  MSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 126
           MSS RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC
Sbjct: 1   MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 60

Query: 127 KKHVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 186
           KKHVESPKPEDRA SV+DDLKTWD+EFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVESPKPEDRAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 187 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 223
           MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

[Close]

BLAST of MC08g0764 vs. ExPASy TrEMBL
Match: A0A6J1K9X2 (SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111491993 PE=3 SV=1)

HSP 1 Score: 302 bits (773), Expect = 2.54e-102
Identity = 153/157 (97.45%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 67  MSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 126
           MSS RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC
Sbjct: 1   MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 60

Query: 127 KKHVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 186
           KKHVESPKPEDR  SVDDDLKTWD+EFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVESPKPEDRTGSVDDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 187 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 223
           MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

[Close]

BLAST of MC08g0764 vs. ExPASy TrEMBL
Match: A0A0A0LMK0 (SKP1-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G346050 PE=3 SV=1)

HSP 1 Score: 302 bits (773), Expect = 2.54e-102
Identity = 153/157 (97.45%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 67  MSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 126
           MSS RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC
Sbjct: 1   MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 60

Query: 127 KKHVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 186
           KKHVESPKPEDR  SVDDDLKTWD+EFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVESPKPEDRTGSVDDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 187 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 223
           MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

[Close]

BLAST of MC08g0764 vs. ExPASy TrEMBL
Match: A0A6J1GJP4 (SKP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454489 PE=3 SV=1)

HSP 1 Score: 302 bits (773), Expect = 2.54e-102
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 67  MSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 126
           MSS RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC
Sbjct: 1   MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 60

Query: 127 KKHVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 186
           KKHVESPKPEDRA SV+DDLKTWD+EFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVESPKPEDRAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 187 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 223
           MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157

[Close]

BLAST of MC08g0764 vs. TAIR 10
Match: AT5G42190.1 (E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein )

HSP 1 Score: 262.3 bits (669), Expect = 3.5e-70
Identity = 135/171 (78.95%), Postives = 145/171 (84.80%), Query Frame = 0


Query: 67  MSSARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 126
           MS+ RKITLKSSDGE FE+DEAVALESQTIKHMIEDDC D+GIPLPNV SKILSKVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 127 KKHVESPKPEDRAA--------------SVDDDLKTWDTEFVKVDQATLFDLILAANYLN 186
           K+HVE+ +  +  A              S D+DLKTWD+EF+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 187 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of MC08g0764 vs. TAIR 10
Match: AT1G75950.1 (S phase kinase-associated protein 1 )

HSP 1 Score: 251.5 bits (641), Expect = 6.2e-67
Identity = 126/159 (79.25%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 69  SARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKK 128
           SA+KI LKSSDGE FEV+EAVALESQTI HM+EDDC D+G+PLPNV SKIL+KVIEYCK+
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 129 HVESPKPE----DRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTV 188
           HVE+   +    + AA+ DDDLK WD +F+K+DQATLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 189 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           ADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of MC08g0764 vs. TAIR 10
Match: AT1G20140.1 (SKP1-like 4 )

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-56
Identity = 109/158 (68.99%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 71  RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHV 130
           + I LKSSDGE FE++EAVA++SQTIKHMIEDDCAD+GIPLPNV   IL+KVIEYCKKHV
Sbjct: 6   KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHV 65

Query: 131 ESP-----KPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 190
           E+        +   ++ +D+LK WD+EFVKVDQ TLFDLILAANYLNI  LLDLTC+ VA
Sbjct: 66  EAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVA 125

Query: 191 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           D ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 126 DQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

[Close]

BLAST of MC08g0764 vs. TAIR 10
Match: AT4G34210.1 (SKP1-like 11 )

HSP 1 Score: 213.4 bits (542), Expect = 1.9e-55
Identity = 109/156 (69.87%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 69  SARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKK 128
           S++ I L SSDG+ FEV+EAVA++SQTI HM+EDDC   GIPL NV SKIL KVIEYCKK
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 129 -HVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 188
            HV+   P       ++DL  WD +F+ ++Q+T+F+LILAANYLNIKSLLDLTCQTVADM
Sbjct: 62  HHVDEANPIS-----EEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADM 121

Query: 189 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           IKGKTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 IKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of MC08g0764 vs. TAIR 10
Match: AT4G34470.1 (SKP1-like 12 )

HSP 1 Score: 211.5 bits (537), Expect = 7.1e-55
Identity = 108/156 (69.23%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 69  SARKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKK 128
           S++ I L SSDG+ FEV+EAVA++SQTI HM+EDDC   GIPL NV SKIL KVIEYCKK
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 129 -HVESPKPEDRAASVDDDLKTWDTEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 188
            HV+   P       ++DL  WD +F+ ++Q+T+F+LILAANYLNIKSL DLTCQTVADM
Sbjct: 62  YHVDEANPIS-----EEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADM 121

Query: 189 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 224
           IKGKTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 IKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

The following BLAST results are available for this feature:

BLAST of MC08g0764 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHW7	5.0e-69	78.95	SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1	[more]
Q39255	8.8e-66	79.25	SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1	[more]
Q6PL11	5.7e-65	78.92	SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1	[more]
Q651E8	5.9e-62	74.55	SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1	[more]
Q9LNT9	3.1e-55	68.99	SKP1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=ASK4 PE=1 SV=1	[more]

BLAST of MC08g0764 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144285.1	2.53e-136	100.00	SKP1-like protein 1A [Momordica charantia]	[more]
KAG6598516.1	2.06e-102	87.57	SKP1-like protein 1B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7020437.1	4.17e-102	86.96	SKP1-like protein 1B, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951749.1	5.26e-102	97.45	SKP1-like protein 1B [Cucurbita moschata] >XP_023002536.1 SKP1-like protein 1B [...	[more]
XP_004143010.1	5.26e-102	97.45	SKP1-like protein 1B [Cucumis sativus] >XP_022962289.1 SKP1-like protein 1B [Cuc...	[more]

BLAST of MC08g0764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CR81	1.22e-136	100.00	SKP1-like protein 1A OS=Momordica charantia OX=3673 GN=LOC111014005 PE=3 SV=1	[more]
A0A6J1KLK5	2.54e-102	97.45	SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496349 PE=3 SV=1	[more]
A0A6J1K9X2	2.54e-102	97.45	SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111491993 PE=3 SV=1	[more]
A0A0A0LMK0	2.54e-102	97.45	SKP1-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G346050 PE=3 SV=1	[more]
A0A6J1GJP4	2.54e-102	97.45	SKP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454489 PE=3 SV=1	[more]

BLAST of MC08g0764 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42190.1	3.5e-70	78.95	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	[more]
AT1G75950.1	6.2e-67	79.25	S phase kinase-associated protein 1	[more]
AT1G20140.1	2.2e-56	68.99	SKP1-like 4	[more]
AT4G34210.1	1.9e-55	69.87	SKP1-like 11	[more]
AT4G34470.1	7.1e-55	69.23	SKP1-like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 70..173 e-value: 3.8E-55 score: 199.2
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 66..223 e-value: 3.4E-76 score: 256.9
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 71..133
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 174..221 e-value: 3.7E-30 score: 103.7
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 72..130 e-value: 7.7E-31 score: 106.1
IPR016897	S-phase kinase-associated protein 1	PANTHER	PTHR11165	SKP1	coord: 67..223
None	No IPR available	PANTHER	PTHR11165:SF145	PUTATIVE-RELATED	coord: 67..223
None	No IPR available	CDD	cd18322	BTB_POZ_SKP1	coord: 72..188 e-value: 2.79901E-67 score: 200.896
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 146..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g0764.1	MC08g0764.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding