MC08g0739 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g0739
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 6024400 .. 6024753 (+)
RNA-Seq Expression	MC08g0739
Synteny	MC08g0739

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCAAACGGAGCAGACGGCTTCGTCATTCACGTAAGGGATCAAGAAGATTACAGAGGAGGAAGTTCCGGCGTGAGCCTCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGGATGTTCATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGTCGCCAATAATGGCGTCCAGGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAAACATCTTGCAGCTCGAATTACTCGTCTTACTCGCATTACAGCGAAGCAATCGCCGATTGTATCGAGTTCTTCAACAAGTCGTCGCTGCAGGAACAAATCGGCGTCGGAGGCAGAAACTCCGATGGAAATGCGATGGTA

mRNA sequence

AAACCAAACGGAGCAGACGGCTTCGTCATTCACGTAAGGGATCAAGAAGATTACAGAGGAGGAAGTTCCGGCGTGAGCCTCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGGATGTTCATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGTCGCCAATAATGGCGTCCAGGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAAACATCTTGCAGCTCGAATTACTCGTCTTACTCGCATTACAGCGAAGCAATCGCCGATTGTATCGAGTTCTTCAACAAGTCGTCGCTGCAGGAACAAATCGGCGTCGGAGGCAGAAACTCCGATGGAAATGCGATGGTA

Coding sequence (CDS)

AAACCAAACGGAGCAGACGGCTTCGTCATTCACGTAAGGGATCAAGAAGATTACAGAGGAGGAAGTTCCGGCGTGAGCCTCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGGATGTTCATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGTCGCCAATAATGGCGTCCAGGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAAACATCTTGCAGCTCGAATTACTCGTCTTACTCGCATTACAGCGAAGCAATCGCCGATTGTATCGAGTTCTTCAACAAGTCGTCGCTGCAGGAACAAATCGGCGTCGGAGGCAGAAACTCCGATGGAAATGCGATGGTA

Protein sequence

KPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNAMV

Homology

[Close]

BLAST of MC08g0739 vs. NCBI nr
Match: XP_022144335.1 (uncharacterized protein LOC111014042 [Momordica charantia])

HSP 1 Score: 238 bits (608), Expect = 4.61e-79
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   KPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMAS 60
           KPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMAS
Sbjct: 14  KPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMAS 73

Query: 61  RQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNAMV 118
           RQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNAMV
Sbjct: 74  RQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNAMV 131

[Close]

BLAST of MC08g0739 vs. NCBI nr
Match: XP_022996993.1 (uncharacterized protein LOC111492057 [Cucurbita maxima])

HSP 1 Score: 178 bits (451), Expect = 3.61e-55
Identity = 95/122 (77.87%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   KPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSP--- 60
           K NGA+ F+I+V D QEDYRGGS GVS+SP R LSRIRR+ MRF+FYFPSRGSSSSP   
Sbjct: 12  KSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFPSRGSSSSPSSS 71

Query: 61  IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNA 118
           IMAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCIEFFNKSS Q+QIG+    SD NA
Sbjct: 72  IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSS-QDQIGI----SDANA 128

[Close]

BLAST of MC08g0739 vs. NCBI nr
Match: KAG7029433.1 (hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175 bits (443), Expect = 1.09e-53
Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   KPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSS---SSP 60
           K NGA+ F+I+V D QEDYRGGS GVS+SPAR LSRIRR+ MRF+FYFPSRGSS   SS 
Sbjct: 12  KSNGANSFIINVEDDQEDYRGGSPGVSISPARFLSRIRRILMRFMFYFPSRGSSPSSSSS 71

Query: 61  IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNA 118
           IMAS++RNLEKFEPPKTSCSSNYSSYSHY+EAIADCIEFFNKSS Q+QIG+    SD NA
Sbjct: 72  IMASKRRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSS-QDQIGI----SDANA 128

[Close]

BLAST of MC08g0739 vs. NCBI nr
Match: KAG6598497.1 (hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 175 bits (443), Expect = 1.09e-53
Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   KPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSS---SSP 60
           K NGA+ F+I+V D QED+RGGS GVS+SPAR LSRIRR+ MRF+FYFPSRGSS   SS 
Sbjct: 12  KSNGANSFIINVEDDQEDFRGGSPGVSISPARFLSRIRRILMRFMFYFPSRGSSPSSSSS 71

Query: 61  IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNA 118
           IMAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCIEFFNKSS Q+QIG+    SD NA
Sbjct: 72  IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSS-QDQIGI----SDANA 128

[Close]

BLAST of MC08g0739 vs. NCBI nr
Match: KAE8652124.1 (hypothetical protein Csa_022629 [Cucumis sativus])

HSP 1 Score: 168 bits (426), Expect = 3.85e-51
Identity = 88/119 (73.95%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 1   KPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMA 60
           K NGA+ FV+HV+D Q+DYRGGS    +SPARILSRIRR+FMRFIFY PSRGS+++   A
Sbjct: 11  KSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSRGSAAAAAAA 70

Query: 61  SRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVG-GRNSDGNAM 117
            +QRNLEKFEPPKTSCSS+YSSYSHY+EAIADCIEF NKSS Q+QIGV  GR SD NAM
Sbjct: 71  LKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSS-QDQIGVDEGRISDANAM 128

[Close]

BLAST of MC08g0739 vs. ExPASy TrEMBL
Match: A0A6J1CRC4 (uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014042 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 2.23e-79
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   KPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMAS 60
           KPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMAS
Sbjct: 14  KPNGADGFVIHVRDQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMAS 73

Query: 61  RQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNAMV 118
           RQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNAMV
Sbjct: 74  RQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNAMV 131

[Close]

BLAST of MC08g0739 vs. ExPASy TrEMBL
Match: A0A6J1KCK5 (uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057 PE=4 SV=1)

HSP 1 Score: 178 bits (451), Expect = 1.75e-55
Identity = 95/122 (77.87%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   KPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSP--- 60
           K NGA+ F+I+V D QEDYRGGS GVS+SP R LSRIRR+ MRF+FYFPSRGSSSSP   
Sbjct: 12  KSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFPSRGSSSSPSSS 71

Query: 61  IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSDGNA 118
           IMAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCIEFFNKSS Q+QIG+    SD NA
Sbjct: 72  IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSS-QDQIGI----SDANA 128

[Close]

BLAST of MC08g0739 vs. ExPASy TrEMBL
Match: A0A0A0LPF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 2.01e-52
Identity = 89/120 (74.17%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 1   KPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSSPIMA 60
           K NGA+ FV+HV+D Q+DYRGGS    +SPARILSRIRR+FMRFIFY PSRGS+++   A
Sbjct: 11  KSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSRGSAAAAAAA 70

Query: 61  SRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVG-GRNSDGNAMV 118
            +QRNLEKFEPPKTSCSS+YSSYSHY+EAIADCIEF NKSS Q+QIGV  GR SD NAMV
Sbjct: 71  LKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSS-QDQIGVDEGRISDANAMV 129

[Close]

BLAST of MC08g0739 vs. ExPASy TrEMBL
Match: A0A5A7VC16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005050 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 7.84e-51
Identity = 90/125 (72.00%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   KPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSSS---- 60
           K NGA+ FVIHV+D Q+DYRGGS    +SPARI+SRIRR+ MRFIFY PSRGSS++    
Sbjct: 11  KSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSRGSSAAAAAA 70

Query: 61  -PIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVG-GRNSD 118
            P  A +Q+NLEKFEPPKTSCSS+YSSYSHY+EAIADCIEFFNKSS Q+QIGV  GR SD
Sbjct: 71  GPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSS-QDQIGVDEGRISD 130

[Close]

BLAST of MC08g0739 vs. ExPASy TrEMBL
Match: A0A6A1UJQ7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G024766 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 3.38e-27
Identity = 62/119 (52.10%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 5   ADGFVIHVRDQE---------DYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSRGSSS- 64
           A+ FVI VR  E              SS  + S  ++ +R R++ MR +F  PSRGSS+ 
Sbjct: 8   AESFVIQVRGCEAVDRHQAPHQTSVDSSEFNFSAMKLFNRFRKILMRLLFSLPSRGSSAA 67

Query: 65  SPIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVGGRNSD 113
           S + ASRQ+N ++FEPPKTSCSS YSS+SHY+EAIADCIEFFNKSS  E +   GR SD
Sbjct: 68  SGMTASRQKNCDRFEPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSHDEILD-DGRKSD 125

[Close]

BLAST of MC08g0739 vs. TAIR 10
Match: AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-11
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 31  RILSRIRRMFMRFIFYFPSRGSSSSPIMASRQRNLEKFEPPKTSCSSN-YSSYSHYSEAI 90
           ++  ++ ++ MR I +     S       SR  + E+FEPPK SCSS+ YSS+ HYSEAI
Sbjct: 2   KLFHKLGKILMRLIDFTLHSSSRRQKKNNSRSGDGERFEPPKISCSSSYYSSHVHYSEAI 61

Query: 91  ADCIEFFNKSS 101
           ADCIEFFNKSS
Sbjct: 62  ADCIEFFNKSS 72

The following BLAST results are available for this feature:

BLAST of MC08g0739 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g0739 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144335.1	4.61e-79	100.00	uncharacterized protein LOC111014042 [Momordica charantia]	[more]
XP_022996993.1	3.61e-55	77.87	uncharacterized protein LOC111492057 [Cucurbita maxima]	[more]
KAG7029433.1	1.09e-53	77.05	hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598497.1	1.09e-53	77.05	hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8652124.1	3.85e-51	73.95	hypothetical protein Csa_022629 [Cucumis sativus]	[more]

BLAST of MC08g0739 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRC4	2.23e-79	100.00	uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1KCK5	1.75e-55	77.87	uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057...	[more]
A0A0A0LPF9	2.01e-52	74.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1	[more]
A0A5A7VC16	7.84e-51	72.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6A1UJQ7	3.38e-27	52.10	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G024766 PE=4 SV=1	[more]

BLAST of MC08g0739 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75717.1	4.4e-11	50.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35111:SF5	F10A5.9	coord: 5..113
None	No IPR available	PANTHER	PTHR35111	F10A5.9-RELATED	coord: 5..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g0739.1	MC08g0739.1	mRNA