Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGGGATCTGACAAGGGATTGGGCCAAAAAGCCCAATACCTGCTTTAGGACACTTCAACATGGGCTTAATCCATAATAAACGCTAACGGGTCAAGGCGTGAAATTGCTCCGATTGCGAGATCTAGACCCCGAGAGAATTGGAGAAACCCTCCATTACTGATTACTCGTTCGTTTTTCACTCAGGGTTCACGTTTCTGGTTTCGAATCCGAGGCCATGGAGATGCAGCTGGGTATTTGAAGGTTCGGCTGTTGAAGACTAATTCAGATGCCGGAAGTTTGAAACAGAAGCTAATCGAAGTGGCCCCCAGCACAGACTACGATGGAGTGTGTTGTTCAGGGCATAATAGAGACACAGGCAAGTTCCATTTCTGTCTCACAATTCGTTTTCGTTTCCATTCCCGGGTAATTTTGTTCTAGGTTTCTCTAATTGGAGAATGTCCCGGTTACATTCTGCAACGTCTTCACTGTTGCTGCTATTCTATCAATCATGATTTAATGTTTTCCTGCATTGTGATACTGCGTGCTATTTTTATTTTTATTTCACGGCTGTTGTGTGTAAATGGATGTAATTTTTTCCCTTAGTTATTCCTTTCTTGACAGTAGCGATAAGTTTCGTGCTTTGGACTTCTATTGACAGTTTGATTCTGCAGCACGTTGAGGCCCTTGAGATACTTCTTCAAGGTATTTGCGGCGTTCCTAGAGAACGATTGAGACTTCATGAAATATGCCTAAAAAGTGGACCCAACTTAGGTATGCATCTTTTTCTTCATCATATTATTGTATATTTTGCCTGTCAGCATGTGATGGTTTTCTCATTGGAGGTGTTTGGTGTGAGGATTTGGATATAGCTTAAAAGTACGAATCCATGTTCATCCCGTGGGTTGTCATGTTTGGGGTTTGTTAGACAAACCCATGAGTTTCAAGTTTTCAACAGGTACCCAAACCAACCCCAATTCCTAAACTTCCAAAACCCTCTACTTAATCCCTAGACTTAATATTCCCGGGCTGAAGATGCCGAACTCACGCCCCAAATGCCCCTGTATAGTGTTTTTTATTTCATAAGAGTGATTGATGGGAGCAGCATTTCTCTTAGAAAAATGGAGGTTGTGCTTCCATTTTATTTCATGTCTAAGTTCGTAATCTCTCGGCATGATGTTAGGTGCTGTGGCTTCGGAGGTTCGGATCTTGTGTGATCTAGAGCAGGCTGAACCGGCATGGTACAACTTGGTCTTTTGCAGTAACAGCGTGTTATTTATTATATTTGGTGTTTACTCTTTTGGAGCTAACTGAATTAATGAGAAGTGTCCCCTTGATTTTTAGGACGGTTAAACATATTGGAGGGGCAATGAGAGGAGCAGGGGCTGAACAACTCTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAGAATGTGCTTCGTCTGTTCTATGCACTTGGCTACAAGTTAGACCATGAGCTGCTTAGAGTTGGTTTTGCTTTCCGTTTCCATCGGGGTGCTCACATAACCGTGACAGTTTCATCAGTTAATAAGATGTTAAAGCTACATTCGACGGATGAGGCTGTGCCTGTAACACCTGGTATACAGCTAGTCGAAGTGACAGCCCCAGCAACTTCTGAAAACTATTCTGAAGTAGCCGGTGCAGTGTCAACTTTCTGTGAATATCTTGCACCGTAAGTACTTTTATTAGGAGTAAATCTTTGTCCTAGTTCTACTCAGTTTGTGCATGTTCATTAGCCTATCTCACAGACTGGAGCTGTGATTGCTGATATGGACTTGATAATCAGCCTTATGGGTATCTTCTTGCCTTGTTGAATGACTGCTGCAAAAAAAAAACACGAAACAAGTTCACAAATATCATTCATTATCTATATGTTGTTGAATTGTTTTGCATTCACAGGGCACTTTTTTACTGGATGCTTTTGCATTGTAATCAATAACTTGCTCCTCTGCCGTGGAAACCTGTAACTATATACTTGTGGGGTTAGAAAATCTAAATTGAGAGAGTTTTTATTCATGTTAGCTCAAAATAAGATCAAATACCAAATATGTCTGTCTTTTGCTATTCTGGTTGCACCTTCTAAAGTGTGACAAGAGACCAAGCTTTTATCTTTACTTTTTACAGCCTGCTGCATTTGTCGAAACCGGGAATATCCACCGGTGTCGTTCCTACTGCTGCTGCTGCCGCAGCATCTCTCCTATCTGATGGTGCAGGAACAACAATGTAGATTTTTCTCGGCACTGAAGCTCTACATCCATATCTTCCCGAACCTTATGACGAAGAAAACAGGATACCATTCTGCTCGGATTCGGAAACAGACTGAATTATCGATTGGATGCTGCTGCTTATCCAAATTCTGGATGTGGCTGTGAGTTCGGCGAAAGTTTAGATGTTAGCAAAAACTTGATCTCAAAAACACTCCCTGTAGTTGCTACACATGGTGTTAGACTAGACTAACTTTTTGGTTTCCATTGAATTAAGTTGTAGACATTAGATGAAGGCTTGTTGTATTTATGTAAATATCTTCAACTACCTCATCCATTTTCAATTGGGGCTTCTTCTAGTGTAACCTTTTTAACTCATAGGCTACAAAGATTTTTTTTTTTTTTTTTTTTTTGGTGTAGGATTGGTTCATTAGAATCTTATGAGATTATAAGGAACATTTTAATATTATTCTTGAGTTGAGGAAG
mRNA sequence
CTGGGATCTGACAAGGGATTGGGCCAAAAAGCCCAATACCTGCTTTAGGACACTTCAACATGGGCTTAATCCATAATAAACGCTAACGGGTCAAGGCGTGAAATTGCTCCGATTGCGAGATCTAGACCCCGAGAGAATTGGAGAAACCCTCCATTACTGATTACTCGTTCGTTTTTCACTCAGGGTTCACGTTTCTGGTTTCGAATCCGAGGCCATGGAGATGCAGCTGGGTATTTGAAGGTTCGGCTGTTGAAGACTAATTCAGATGCCGGAAGTTTGAAACAGAAGCTAATCGAAGTGGCCCCCAGCACAGACTACGATGGAGTGTGTTGTTCAGGGCATAATAGAGACACAGCACGTTGAGGCCCTTGAGATACTTCTTCAAGGTATTTGCGGCGTTCCTAGAGAACGATTGAGACTTCATGAAATATGCCTAAAAAGTGGACCCAACTTAGGTGCTGTGGCTTCGGAGGTTCGGATCTTGTGTGATCTAGAGCAGGCTGAACCGGCATGGACGGTTAAACATATTGGAGGGGCAATGAGAGGAGCAGGGGCTGAACAACTCTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAGAATGTGCTTCGTCTGTTCTATGCACTTGGCTACAAGTTAGACCATGAGCTGCTTAGAGTTGGTTTTGCTTTCCGTTTCCATCGGGGTGCTCACATAACCGTGACAGTTTCATCAGTTAATAAGATGTTAAAGCTACATTCGACGGATGAGGCTGTGCCTGTAACACCTGGTATACAGCTAGTCGAAGTGACAGCCCCAGCAACTTCTGAAAACTATTCTGAAGTAGCCGGTGCAGTGTCAACTTTCTGTGAATATCTTGCACCCCTGCTGCATTTGTCGAAACCGGGAATATCCACCGGTGTCGTTCCTACTGCTGCTGCTGCCGCAGCATCTCTCCTATCTGATGGTGCAGGAACAACAATGTAGATTTTTCTCGGCACTGAAGCTCTACATCCATATCTTCCCGAACCTTATGACGAAGAAAACAGGATACCATTCTGCTCGGATTCGGAAACAGACTGAATTATCGATTGGATGCTGCTGCTTATCCAAATTCTGGATGTGGCTGTGAGTTCGGCGAAAGTTTAGATGTTAGCAAAAACTTGATCTCAAAAACACTCCCTGTAGTTGCTACACATGGTGTTAGACTAGACTAACTTTTTGGTTTCCATTGAATTAAGTTGTAGACATTAGATGAAGGCTTGTTGTATTTATGTAAATATCTTCAACTACCTCATCCATTTTCAATTGGGGCTTCTTCTAGTGTAACCTTTTTAACTCATAGGCTACAAAGATTTTTTTTTTTTTTTTTTTTTTGGTGTAGGATTGGTTCATTAGAATCTTATGAGATTATAAGGAACATTTTAATATTATTCTTGAGTTGAGGAAG
Coding sequence (CDS)
ATGGAGTGTGTTGTTCAGGGCATAATAGAGACACAGCACGTTGAGGCCCTTGAGATACTTCTTCAAGGTATTTGCGGCGTTCCTAGAGAACGATTGAGACTTCATGAAATATGCCTAAAAAGTGGACCCAACTTAGGTGCTGTGGCTTCGGAGGTTCGGATCTTGTGTGATCTAGAGCAGGCTGAACCGGCATGGACGGTTAAACATATTGGAGGGGCAATGAGAGGAGCAGGGGCTGAACAACTCTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAGAATGTGCTTCGTCTGTTCTATGCACTTGGCTACAAGTTAGACCATGAGCTGCTTAGAGTTGGTTTTGCTTTCCGTTTCCATCGGGGTGCTCACATAACCGTGACAGTTTCATCAGTTAATAAGATGTTAAAGCTACATTCGACGGATGAGGCTGTGCCTGTAACACCTGGTATACAGCTAGTCGAAGTGACAGCCCCAGCAACTTCTGAAAACTATTCTGAAGTAGCCGGTGCAGTGTCAACTTTCTGTGAATATCTTGCACCCCTGCTGCATTTGTCGAAACCGGGAATATCCACCGGTGTCGTTCCTACTGCTGCTGCTGCCGCAGCATCTCTCCTATCTGATGGTGCAGGAACAACAATGTAG
Protein sequence
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQAEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAFRFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Homology
BLAST of MC08g0646 vs. ExPASy Swiss-Prot
Match:
Q9SJZ6 (Mediator of RNA polymerase II transcription subunit 18 OS=Arabidopsis thaliana OX=3702 GN=MED18 PE=1 SV=1)
HSP 1 Score: 361.7 bits (927), Expect = 5.8e-99
Identity = 178/217 (82.03%), Postives = 203/217 (93.55%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQG+CGV RERLR+HE+CL+SGPNLG V+SEVR+LCDL+Q
Sbjct: 3 MECVVQGIIETQHVEALEILLQGLCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQ 62
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
EP WTVKH+GGAMRGAGA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDHELL+VGFAF
Sbjct: 63 PEPTWTVKHVGGAMRGAGADQISVLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAF 122
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
F R AHI+V+VSSVNKM K+H+ DEAVPVTPG+Q+V+VTAPATSENYSEVA AVS+FCE
Sbjct: 123 HFQRTAHISVSVSSVNKMPKVHAIDEAVPVTPGMQIVDVTAPATSENYSEVAAAVSSFCE 182
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 218
+LAPL+HLSKP ISTGVVPTAAAAAASL+SDG GTT+
Sbjct: 183 FLAPLVHLSKPSISTGVVPTAAAAAASLMSDGGGTTL 219
BLAST of MC08g0646 vs. NCBI nr
Match:
XP_022144379.1 (mediator of RNA polymerase II transcription subunit 18 [Momordica charantia])
HSP 1 Score: 418 bits (1075), Expect = 3.24e-147
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF
Sbjct: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE
Sbjct: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. NCBI nr
Match:
XP_011649597.2 (mediator of RNA polymerase II transcription subunit 18 isoform X1 [Cucumis sativus] >KAE8652099.1 hypothetical protein Csa_022370 [Cucumis sativus])
HSP 1 Score: 412 bits (1059), Expect = 8.92e-145
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGP+LGAVASEVRILCDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
AEP WTVKHIGGA+RGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF
Sbjct: 61 AEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATS+NYSEVAGAVSTFCE
Sbjct: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. NCBI nr
Match:
XP_038885244.1 (mediator of RNA polymerase II transcription subunit 18 [Benincasa hispida] >XP_038885245.1 mediator of RNA polymerase II transcription subunit 18 [Benincasa hispida])
HSP 1 Score: 412 bits (1058), Expect = 1.27e-144
Identity = 212/217 (97.70%), Postives = 216/217 (99.54%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGP+LGAVASE+RILCDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEIRILCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
AEP WTVKHIGGA+RGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF
Sbjct: 61 AEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATS+NYSEVAGAVSTFCE
Sbjct: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. NCBI nr
Match:
XP_022951149.1 (mediator of RNA polymerase II transcription subunit 18 [Cucurbita moschata] >XP_023536835.1 mediator of RNA polymerase II transcription subunit 18 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 411 bits (1056), Expect = 2.56e-144
Identity = 211/217 (97.24%), Postives = 215/217 (99.08%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRI+CDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRIMCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
EP+WTVKHIGGAMRG+GAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGF+F
Sbjct: 61 TEPSWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RFHRG HITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE
Sbjct: 121 RFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. NCBI nr
Match:
XP_008444669.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Cucumis melo])
HSP 1 Score: 410 bits (1053), Expect = 7.33e-144
Identity = 212/217 (97.70%), Postives = 216/217 (99.54%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGP+LGAVASEVRILCDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
AEP WTVKHIGGA+RGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF
Sbjct: 61 AEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RF+RGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATS+NYSEVAGAVSTFCE
Sbjct: 121 RFYRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. ExPASy TrEMBL
Match:
A0A6J1CS50 (mediator of RNA polymerase II transcription subunit 18 OS=Momordica charantia OX=3673 GN=LOC111014072 PE=3 SV=1)
HSP 1 Score: 418 bits (1075), Expect = 1.57e-147
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF
Sbjct: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE
Sbjct: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. ExPASy TrEMBL
Match:
A0A6J1GHW3 (mediator of RNA polymerase II transcription subunit 18 OS=Cucurbita moschata OX=3662 GN=LOC111454081 PE=3 SV=1)
HSP 1 Score: 411 bits (1056), Expect = 1.24e-144
Identity = 211/217 (97.24%), Postives = 215/217 (99.08%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRI+CDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRIMCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
EP+WTVKHIGGAMRG+GAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGF+F
Sbjct: 61 TEPSWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RFHRG HITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE
Sbjct: 121 RFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. ExPASy TrEMBL
Match:
A0A1S3BBM1 (mediator of RNA polymerase II transcription subunit 18 OS=Cucumis melo OX=3656 GN=LOC103487937 PE=3 SV=1)
HSP 1 Score: 410 bits (1053), Expect = 3.55e-144
Identity = 212/217 (97.70%), Postives = 216/217 (99.54%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGP+LGAVASEVRILCDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
AEP WTVKHIGGA+RGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF
Sbjct: 61 AEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RF+RGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATS+NYSEVAGAVSTFCE
Sbjct: 121 RFYRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. ExPASy TrEMBL
Match:
A0A6J1KK74 (mediator of RNA polymerase II transcription subunit 18 OS=Cucurbita maxima OX=3661 GN=LOC111496026 PE=3 SV=1)
HSP 1 Score: 409 bits (1050), Expect = 1.02e-143
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRI+CDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRIMCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
EP+WTVKHIGGAMRG+GAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGF+F
Sbjct: 61 TEPSWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RFHRG HITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVA AVSTFCE
Sbjct: 121 RFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVASAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 217
BLAST of MC08g0646 vs. ExPASy TrEMBL
Match:
A0A0A0LNJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360810 PE=3 SV=1)
HSP 1 Score: 407 bits (1047), Expect = 3.02e-143
Identity = 213/218 (97.71%), Postives = 216/218 (99.08%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGP+LGAVASEVRILCDLEQ
Sbjct: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQ 60
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
AEP WTVKHIGGA+RGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF
Sbjct: 61 AEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATS+NYSEVAGAVSTFCE
Sbjct: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCE 180
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLS-DGAGTTM 217
YLAPLLHLSKPGISTGVVPTAAAAAASLLS DGAGTTM
Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSADGAGTTM 218
BLAST of MC08g0646 vs. TAIR 10
Match:
AT2G22370.1 (unknown protein; Has 127 Blast hits to 127 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )
HSP 1 Score: 361.7 bits (927), Expect = 4.2e-100
Identity = 178/217 (82.03%), Postives = 203/217 (93.55%), Query Frame = 0
Query: 1 MECVVQGIIETQHVEALEILLQGICGVPRERLRLHEICLKSGPNLGAVASEVRILCDLEQ 60
MECVVQGIIETQHVEALEILLQG+CGV RERLR+HE+CL+SGPNLG V+SEVR+LCDL+Q
Sbjct: 3 MECVVQGIIETQHVEALEILLQGLCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQ 62
Query: 61 AEPAWTVKHIGGAMRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAF 120
EP WTVKH+GGAMRGAGA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDHELL+VGFAF
Sbjct: 63 PEPTWTVKHVGGAMRGAGADQISVLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAF 122
Query: 121 RFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCE 180
F R AHI+V+VSSVNKM K+H+ DEAVPVTPG+Q+V+VTAPATSENYSEVA AVS+FCE
Sbjct: 123 HFQRTAHISVSVSSVNKMPKVHAIDEAVPVTPGMQIVDVTAPATSENYSEVAAAVSSFCE 182
Query: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM 218
+LAPL+HLSKP ISTGVVPTAAAAAASL+SDG GTT+
Sbjct: 183 FLAPLVHLSKPSISTGVVPTAAAAAASLMSDGGGTTL 219
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SJZ6 | 5.8e-99 | 82.03 | Mediator of RNA polymerase II transcription subunit 18 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
XP_022144379.1 | 3.24e-147 | 100.00 | mediator of RNA polymerase II transcription subunit 18 [Momordica charantia] | [more] |
XP_011649597.2 | 8.92e-145 | 98.16 | mediator of RNA polymerase II transcription subunit 18 isoform X1 [Cucumis sativ... | [more] |
XP_038885244.1 | 1.27e-144 | 97.70 | mediator of RNA polymerase II transcription subunit 18 [Benincasa hispida] >XP_0... | [more] |
XP_022951149.1 | 2.56e-144 | 97.24 | mediator of RNA polymerase II transcription subunit 18 [Cucurbita moschata] >XP_... | [more] |
XP_008444669.1 | 7.33e-144 | 97.70 | PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CS50 | 1.57e-147 | 100.00 | mediator of RNA polymerase II transcription subunit 18 OS=Momordica charantia OX... | [more] |
A0A6J1GHW3 | 1.24e-144 | 97.24 | mediator of RNA polymerase II transcription subunit 18 OS=Cucurbita moschata OX=... | [more] |
A0A1S3BBM1 | 3.55e-144 | 97.70 | mediator of RNA polymerase II transcription subunit 18 OS=Cucumis melo OX=3656 G... | [more] |
A0A6J1KK74 | 1.02e-143 | 96.77 | mediator of RNA polymerase II transcription subunit 18 OS=Cucurbita maxima OX=36... | [more] |
A0A0A0LNJ4 | 3.02e-143 | 97.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360810 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G22370.1 | 4.2e-100 | 82.03 | unknown protein; Has 127 Blast hits to 127 proteins in 48 species: Archae - 0; B... | [more] |