MC08g0628 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g0628
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	MYB transcription factor
Location	MC08: 5123219 .. 5123833 (+)
RNA-Seq Expression	MC08g0628
Synteny	MC08g0628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGCGGCCGGAGAAGATCAAAGGGCCGTGGAGCGCGGAGGAGGACCGGATTTTAACCCAGCTCGTCGGCCGGTACGGGCCGAGAAATTGGTCGTTGATTAGCCGGTATATTAAGGGCCGGTCCGGGAAATCGTGCCGGCTCCGGTGGTGTAACCAGCTGAGCCCGAGTGTGGAGCACCGGCCATTTTCTCCGACGGAGGATGAGACCATTTTGGCCGCGCATGCCCGGTTCGGCAACCGGTGGGCCACCATTGCGCGGTTGCTTCCGGGCCGGACCGATAATGCCGTTAAGAATCATTGGAACTCGACGCTAAAGCGAAGGGCGAGGGAACGACAGCAGCAATTAGTTATGGACGGAATTGCCCCTGAAAATCATGGAAATTCCGTGAACCTCCCCAGCGACTTGAAGCTGTCCGTACCTGATCTGGAGGATGACCCGTTGACCGCTTTGACTCTGGCACCGCCGGGGATCGGCGGGGCCGACCCTAGAGCCGCGGCGGTGGACGACCGGCGGATCGAGAGTCTGCCGGTGGGGTTTTGGGATGCAATGAGGGACGTGATAGCAAGGGAGGTGAGGGAATACATGACGACGACGTTTATGGAAAATCCGGAGCTT

mRNA sequence

AGGCGGCCGGAGAAGATCAAAGGGCCGTGGAGCGCGGAGGAGGACCGGATTTTAACCCAGCTCGTCGGCCGGTACGGGCCGAGAAATTGGTCGTTGATTAGCCGGTATATTAAGGGCCGGTCCGGGAAATCGTGCCGGCTCCGGTGGTGTAACCAGCTGAGCCCGAGTGTGGAGCACCGGCCATTTTCTCCGACGGAGGATGAGACCATTTTGGCCGCGCATGCCCGGTTCGGCAACCGGTGGGCCACCATTGCGCGGTTGCTTCCGGGCCGGACCGATAATGCCGTTAAGAATCATTGGAACTCGACGCTAAAGCGAAGGGCGAGGGAACGACAGCAGCAATTAGTTATGGACGGAATTGCCCCTGAAAATCATGGAAATTCCGTGAACCTCCCCAGCGACTTGAAGCTGTCCGTACCTGATCTGGAGGATGACCCGTTGACCGCTTTGACTCTGGCACCGCCGGGGATCGGCGGGGCCGACCCTAGAGCCGCGGCGGTGGACGACCGGCGGATCGAGAGTCTGCCGGTGGGGTTTTGGGATGCAATGAGGGACGTGATAGCAAGGGAGGTGAGGGAATACATGACGACGACGTTTATGGAAAATCCGGAGCTT

Coding sequence (CDS)

AGGCGGCCGGAGAAGATCAAAGGGCCGTGGAGCGCGGAGGAGGACCGGATTTTAACCCAGCTCGTCGGCCGGTACGGGCCGAGAAATTGGTCGTTGATTAGCCGGTATATTAAGGGCCGGTCCGGGAAATCGTGCCGGCTCCGGTGGTGTAACCAGCTGAGCCCGAGTGTGGAGCACCGGCCATTTTCTCCGACGGAGGATGAGACCATTTTGGCCGCGCATGCCCGGTTCGGCAACCGGTGGGCCACCATTGCGCGGTTGCTTCCGGGCCGGACCGATAATGCCGTTAAGAATCATTGGAACTCGACGCTAAAGCGAAGGGCGAGGGAACGACAGCAGCAATTAGTTATGGACGGAATTGCCCCTGAAAATCATGGAAATTCCGTGAACCTCCCCAGCGACTTGAAGCTGTCCGTACCTGATCTGGAGGATGACCCGTTGACCGCTTTGACTCTGGCACCGCCGGGGATCGGCGGGGCCGACCCTAGAGCCGCGGCGGTGGACGACCGGCGGATCGAGAGTCTGCCGGTGGGGTTTTGGGATGCAATGAGGGACGTGATAGCAAGGGAGGTGAGGGAATACATGACGACGACGTTTATGGAAAATCCGGAGCTT

Protein sequence

RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGIAPENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPVGFWDAMRDVIAREVREYMTTTFMENPEL

Homology

[Close]

BLAST of MC08g0628 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44
Identity = 88/134 (65.67%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 4   EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFS 63
           E+IKGPWS EED +L +LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP VEHR FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 64  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGIAPE 123
             EDETI+ AHARFGN+WATI+RLL GRTDNA+KNHWNSTLKR+     Q     G    
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGG---- 129

Query: 124 NHGNSVNLPSDLKL 138
           N G   NL  +  L
Sbjct: 130 NGGYDGNLGEEQPL 139

[Close]

BLAST of MC08g0628 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-44
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 4   EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFS 63
           +++KGPWS EED  L ++V +YGPRNWS IS+ I GRSGKSCRLRWCNQLSP VEHRPFS
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 64  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 108
           P EDETI+ A A+FGN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of MC08g0628 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-44
Identity = 81/104 (77.88%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 4   EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFS 63
           ++IKGPWS EED  L +LV +YGPRNW++IS+ I GRSGKSCRLRWCNQLSP VEHRPFS
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 64  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 108
             EDETI  AHA+FGN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of MC08g0628 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.4e-38
Identity = 69/106 (65.09%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 2   RPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRP 61
           R +++KGPWS EED +L++LV R G RNWS I+R I GRSGKSCRLRWCNQL+P++    
Sbjct: 50  RRDRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNS 109

Query: 62  FSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 108
           F+  ED+ I+AAHA  GN+WA IA+LLPGRTDNA+KNHWNS L+RR
Sbjct: 110 FTEVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRR 155

[Close]

BLAST of MC08g0628 vs. ExPASy Swiss-Prot
Match: O04192 (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-36
Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 5   KIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSP 64
           K+KGPW  E+D  LT+LV   GPRNW+LISR I GRSGKSCRLRWCNQL P ++ +PFS 
Sbjct: 48  KVKGPWLPEQDEALTRLVKMCGPRNWNLISRGIPGRSGKSCRLRWCNQLDPILKRKPFSD 107

Query: 65  TEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARER 112
            E+  I++A A  GN+W+ IA+LLPGRTDNA+KNHWNS L+R+  E+
Sbjct: 108 EEEHMIMSAQAVLGNKWSVIAKLLPGRTDNAIKNHWNSNLRRKPAEQ 154

[Close]

BLAST of MC08g0628 vs. NCBI nr
Match: XP_022144294.1 (transcription factor MYB1-like [Momordica charantia])

HSP 1 Score: 422 bits (1086), Expect = 7.71e-149
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR
Sbjct: 29  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 88

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGI 120
           PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGI
Sbjct: 89  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGI 148

Query: 121 APENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPVGFW 180
           APENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPVGFW
Sbjct: 149 APENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPVGFW 208

Query: 181 DAMRDVIAREVREYMTTTFMENPEL 205
           DAMRDVIAREVREYMTTTFMENPEL
Sbjct: 209 DAMRDVIAREVREYMTTTFMENPEL 233

[Close]

BLAST of MC08g0628 vs. NCBI nr
Match: XP_038885826.1 (transcription factor MYB25-like [Benincasa hispida])

HSP 1 Score: 366 bits (940), Expect = 1.20e-126
Identity = 181/207 (87.44%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLV RYGPRNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHR
Sbjct: 25  RRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHR 84

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGI 120
           PFSP EDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE+QQQLVMD I
Sbjct: 85  PFSPMEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQQQLVMDEI 144

Query: 121 APENHGNS---VNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPV 180
           APENHGN+   VN+ SDLKLSVP LE+DPLTALTLAPPGIGG   R    ++RR+E+ P 
Sbjct: 145 APENHGNNNNAVNIASDLKLSVP-LEEDPLTALTLAPPGIGGG--RTTTAEERRVENFPA 204

Query: 181 GFWDAMRDVIAREVREYMTTTFMENPE 204
           GFWDAMRDVIAREVREYMTTTFMENPE
Sbjct: 205 GFWDAMRDVIAREVREYMTTTFMENPE 228

[Close]

BLAST of MC08g0628 vs. NCBI nr
Match: XP_008444647.1 (PREDICTED: transcription factor MYB44-like [Cucumis melo])

HSP 1 Score: 358 bits (920), Expect = 1.77e-123
Identity = 183/212 (86.32%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHR
Sbjct: 27  RRPEKIKGPWSAEEDRILTQLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHR 86

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQ-LVMDG 120
           PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE+QQQ LVMDG
Sbjct: 87  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQQQQLVMDG 146

Query: 121 IAPENHG------NSVNLPSDLKLSVP-DLEDDPLTALTLAPPGIGGADPRAAAVDDRRI 180
           I PE HG      N+VN+ SDLKLSV   LEDDPLTALTLAPPGIGG   R  AVD+R +
Sbjct: 147 ITPECHGSNNNNNNAVNIASDLKLSVSVPLEDDPLTALTLAPPGIGGV--RTTAVDERLV 206

Query: 181 ESLPVGFWDAMRDVIAREVREYMTTTFMENPE 204
           ES P GFWDAMRDVIAREVREYMTTTFMENPE
Sbjct: 207 ESFPAGFWDAMRDVIAREVREYMTTTFMENPE 236

[Close]

BLAST of MC08g0628 vs. NCBI nr
Match: KAA0033571.1 (transcription factor MYB44-like [Cucumis melo var. makuwa])

HSP 1 Score: 358 bits (920), Expect = 1.83e-123
Identity = 183/212 (86.32%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHR
Sbjct: 27  RRPEKIKGPWSAEEDRILTQLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHR 86

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQ-LVMDG 120
           PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE+QQQ LVMDG
Sbjct: 87  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQQQQLVMDG 146

Query: 121 IAPENHG------NSVNLPSDLKLSVP-DLEDDPLTALTLAPPGIGGADPRAAAVDDRRI 180
           I PE HG      N+VN+ SDLKLSV   LEDDPLTALTLAPPGIGG     A VD+RR+
Sbjct: 147 ITPECHGSNNNNNNAVNIASDLKLSVSVPLEDDPLTALTLAPPGIGGVRT-TAVVDERRV 206

Query: 181 ESLPVGFWDAMRDVIAREVREYMTTTFMENPE 204
           ES P GFWDAMRDVIAREVREYMTTTFMENPE
Sbjct: 207 ESFPAGFWDAMRDVIAREVREYMTTTFMENPE 237

[Close]

BLAST of MC08g0628 vs. NCBI nr
Match: XP_004152727.1 (transcription factor MYB44 [Cucumis sativus])

HSP 1 Score: 355 bits (912), Expect = 3.37e-122
Identity = 182/216 (84.26%), Postives = 188/216 (87.04%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHR
Sbjct: 27  RRPEKIKGPWSAEEDRILTQLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHR 86

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQ--QQLVMD 120
           PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE+Q  QQLVMD
Sbjct: 87  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQHHQQLVMD 146

Query: 121 GIAPENHG-------NSVNLPSDLKLSVP---DLEDDPLTALTLAPPGIGGADPRAAAVD 180
           GI PE HG       N VN+ SDLKLSV     LEDDPLTALTLAPPGIGG   R  A +
Sbjct: 147 GITPECHGISNNNNNNVVNIASDLKLSVSVSVPLEDDPLTALTLAPPGIGGV--RTTAAE 206

Query: 181 DRRIESLPVGFWDAMRDVIAREVREYMTTTFMENPE 204
           +RR+ES P GFWDAMRDVIAREVREYMTTTFMENPE
Sbjct: 207 ERRVESFPAGFWDAMRDVIAREVREYMTTTFMENPE 240

[Close]

BLAST of MC08g0628 vs. ExPASy TrEMBL
Match: A0A6J1CRX2 (transcription factor MYB1-like OS=Momordica charantia OX=3673 GN=LOC111014010 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 3.73e-149
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR
Sbjct: 29  RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 88

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGI 120
           PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGI
Sbjct: 89  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGI 148

Query: 121 APENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPVGFW 180
           APENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPVGFW
Sbjct: 149 APENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPVGFW 208

Query: 181 DAMRDVIAREVREYMTTTFMENPEL 205
           DAMRDVIAREVREYMTTTFMENPEL
Sbjct: 209 DAMRDVIAREVREYMTTTFMENPEL 233

[Close]

BLAST of MC08g0628 vs. ExPASy TrEMBL
Match: A0A1S3BAB9 (transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC103487918 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 8.57e-124
Identity = 183/212 (86.32%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHR
Sbjct: 27  RRPEKIKGPWSAEEDRILTQLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHR 86

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQ-LVMDG 120
           PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE+QQQ LVMDG
Sbjct: 87  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQQQQLVMDG 146

Query: 121 IAPENHG------NSVNLPSDLKLSVP-DLEDDPLTALTLAPPGIGGADPRAAAVDDRRI 180
           I PE HG      N+VN+ SDLKLSV   LEDDPLTALTLAPPGIGG   R  AVD+R +
Sbjct: 147 ITPECHGSNNNNNNAVNIASDLKLSVSVPLEDDPLTALTLAPPGIGGV--RTTAVDERLV 206

Query: 181 ESLPVGFWDAMRDVIAREVREYMTTTFMENPE 204
           ES P GFWDAMRDVIAREVREYMTTTFMENPE
Sbjct: 207 ESFPAGFWDAMRDVIAREVREYMTTTFMENPE 236

[Close]

BLAST of MC08g0628 vs. ExPASy TrEMBL
Match: A0A5A7SVX1 (Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48285G00010 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 8.87e-124
Identity = 183/212 (86.32%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHR
Sbjct: 27  RRPEKIKGPWSAEEDRILTQLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHR 86

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQ-LVMDG 120
           PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE+QQQ LVMDG
Sbjct: 87  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQQQQLVMDG 146

Query: 121 IAPENHG------NSVNLPSDLKLSVP-DLEDDPLTALTLAPPGIGGADPRAAAVDDRRI 180
           I PE HG      N+VN+ SDLKLSV   LEDDPLTALTLAPPGIGG     A VD+RR+
Sbjct: 147 ITPECHGSNNNNNNAVNIASDLKLSVSVPLEDDPLTALTLAPPGIGGVRT-TAVVDERRV 206

Query: 181 ESLPVGFWDAMRDVIAREVREYMTTTFMENPE 204
           ES P GFWDAMRDVIAREVREYMTTTFMENPE
Sbjct: 207 ESFPAGFWDAMRDVIAREVREYMTTTFMENPE 237

[Close]

BLAST of MC08g0628 vs. ExPASy TrEMBL
Match: A0A0A0LKY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360620 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 1.63e-122
Identity = 182/216 (84.26%), Postives = 188/216 (87.04%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRILTQLV RYG RNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHR
Sbjct: 27  RRPEKIKGPWSAEEDRILTQLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHR 86

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQ--QQLVMD 120
           PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE+Q  QQLVMD
Sbjct: 87  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQHHQQLVMD 146

Query: 121 GIAPENHG-------NSVNLPSDLKLSVP---DLEDDPLTALTLAPPGIGGADPRAAAVD 180
           GI PE HG       N VN+ SDLKLSV     LEDDPLTALTLAPPGIGG   R  A +
Sbjct: 147 GITPECHGISNNNNNNVVNIASDLKLSVSVSVPLEDDPLTALTLAPPGIGGV--RTTAAE 206

Query: 181 DRRIESLPVGFWDAMRDVIAREVREYMTTTFMENPE 204
           +RR+ES P GFWDAMRDVIAREVREYMTTTFMENPE
Sbjct: 207 ERRVESFPAGFWDAMRDVIAREVREYMTTTFMENPE 240

[Close]

BLAST of MC08g0628 vs. ExPASy TrEMBL
Match: A0A6J1KMR9 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111496025 PE=4 SV=1)

HSP 1 Score: 346 bits (887), Expect = 6.88e-119
Identity = 171/204 (83.82%), Postives = 180/204 (88.24%), Query Frame = 0


Query: 1   RRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHR 60
           RRPEKIKGPWSAEEDRIL  LV RYGPRNWSLISRYIKGRSGKSCRLRWCNQLSP+VEHR
Sbjct: 31  RRPEKIKGPWSAEEDRILIHLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHR 90

Query: 61  PFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGI 120
           PFS TEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAR++Q  L MDGI
Sbjct: 91  PFSATEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARDQQHHLAMDGI 150

Query: 121 APENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDDRRIESLPVGFW 180
            P+NHGN+V   SDLKLSVP LEDDPLTALTLAPPGI G        ++RRIES P GFW
Sbjct: 151 TPDNHGNAVT-DSDLKLSVP-LEDDPLTALTLAPPGISGG----VVAEERRIESFPAGFW 210

Query: 181 DAMRDVIAREVREYMTTTFMENPE 204
           DAMRDV+AREVREYMTTTF+EN E
Sbjct: 211 DAMRDVVAREVREYMTTTFLENQE 228

[Close]

BLAST of MC08g0628 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 181.0 bits (458), Expect = 9.5e-46
Identity = 88/134 (65.67%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 4   EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFS 63
           E+IKGPWS EED +L +LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP VEHR FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 64  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGIAPE 123
             EDETI+ AHARFGN+WATI+RLL GRTDNA+KNHWNSTLKR+     Q     G    
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGG---- 129

Query: 124 NHGNSVNLPSDLKL 138
           N G   NL  +  L
Sbjct: 130 NGGYDGNLGEEQPL 139

[Close]

BLAST of MC08g0628 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 4   EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFS 63
           +++KGPWS EED  L ++V +YGPRNWS IS+ I GRSGKSCRLRWCNQLSP VEHRPFS
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 64  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 108
           P EDETI+ A A+FGN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of MC08g0628 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-45
Identity = 81/104 (77.88%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 4   EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFS 63
           ++IKGPWS EED  L +LV +YGPRNW++IS+ I GRSGKSCRLRWCNQLSP VEHRPFS
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 64  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 108
             EDETI  AHA+FGN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of MC08g0628 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-45
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 4   EKIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFS 63
           ++IKGPWS EED +L  LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP VEHR F+
Sbjct: 10  DRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFT 69

Query: 64  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 108
             ED+TI+ AHARFGN+WATIARLL GRTDNA+KNHWNSTLKR+
Sbjct: 70  AEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of MC08g0628 vs. TAIR 10
Match: AT3G55730.1 (myb domain protein 109 )

HSP 1 Score: 164.9 bits (416), Expect = 7.0e-41
Identity = 84/165 (50.91%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 5   KIKGPWSAEEDRILTQLVGRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSP 64
           K+KGPWS EED +LT+LV + GPRNWSLI+R I GRSGKSCRLRWCNQL P ++ +PFS 
Sbjct: 54  KVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSD 113

Query: 65  TEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQQQLVMDGIAPEN 124
            ED  I++AHA  GN+WA IA+LL GRTDNA+KNHWNSTL+R+  +    L  +G   + 
Sbjct: 114 EEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKYAD----LWNNG---QW 173

Query: 125 HGNSVNLPSDLKLSVPDLEDDPLTALTLAPPGIGGADPRAAAVDD 170
             NSV   S    +V +  + P +   L    I  + P+   V D
Sbjct: 174 MANSVTTASVKNENVDETTNPPSSKQQLPQGDINSSPPKPPQVSD 211

The following BLAST results are available for this feature:

BLAST of MC08g0628 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23160	1.3e-44	65.67	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q9SN12	1.7e-44	76.92	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
Q9FDW1	3.0e-44	77.88	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
Q42575	5.4e-38	65.09	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]
O04192	1.7e-36	62.62	Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1	[more]

BLAST of MC08g0628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144294.1	7.71e-149	100.00	transcription factor MYB1-like [Momordica charantia]	[more]
XP_038885826.1	1.20e-126	87.44	transcription factor MYB25-like [Benincasa hispida]	[more]
XP_008444647.1	1.77e-123	86.32	PREDICTED: transcription factor MYB44-like [Cucumis melo]	[more]
KAA0033571.1	1.83e-123	86.32	transcription factor MYB44-like [Cucumis melo var. makuwa]	[more]
XP_004152727.1	3.37e-122	84.26	transcription factor MYB44 [Cucumis sativus]	[more]

BLAST of MC08g0628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRX2	3.73e-149	100.00	transcription factor MYB1-like OS=Momordica charantia OX=3673 GN=LOC111014010 PE...	[more]
A0A1S3BAB9	8.57e-124	86.32	transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC103487918 PE=4 SV=...	[more]
A0A5A7SVX1	8.87e-124	86.32	Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0LKY3	1.63e-122	84.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360620 PE=4 SV=1	[more]
A0A6J1KMR9	6.88e-119	83.82	transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111496025 PE=4...	[more]

BLAST of MC08g0628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37260.1	9.5e-46	65.67	myb domain protein 73	[more]
AT3G50060.1	1.2e-45	76.92	myb domain protein 77	[more]
AT5G67300.1	2.1e-45	77.88	myb domain protein r1	[more]
AT2G23290.1	8.0e-45	75.96	myb domain protein 70	[more]
AT3G55730.1	7.0e-41	50.91	myb domain protein 109	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 58..106 e-value: 1.9E-14 score: 64.0 coord: 6..55 e-value: 5.6E-16 score: 69.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 54..104 score: 9.256491
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 2..53 score: 11.985405
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 9..51 e-value: 6.14326E-15 score: 64.1338
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 61..104 e-value: 1.9047E-11 score: 54.889
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 10..68 e-value: 3.1E-17 score: 62.5
None	No IPR available	GENE3D	1.10.10.60		coord: 60..119 e-value: 8.1E-21 score: 75.8
None	No IPR available	GENE3D	1.10.10.60		coord: 6..58 e-value: 8.8E-22 score: 78.8
None	No IPR available	PANTHER	PTHR45614:SF53	TRANSCRIPTION FACTOR MYB44-LIKE	coord: 3..191
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 3..191
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 59..108 score: 22.51465
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 2..57 score: 27.53603
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g0628.1	MC08g0628.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding