MC08g0622 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0622
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111013914
LocationMC08: 5055343 .. 5055429 (+)
RNA-Seq ExpressionMC08g0622
SyntenyMC08g0622
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAAAGGGAGCCCTTCCAGAAATTCTCGAAGGCCTGAGCCGAACCCAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAA

mRNA sequence

CCCAAAGGGAGCCCTTCCAGAAATTCTCGAAGGCCTGAGCCGAACCCAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAA

Coding sequence (CDS)

CCCAAAGGGAGCCCTTCCAGAAATTCTCGAAGGCCTGAGCCGAACCCAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAA

Protein sequence

PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ
Homology
BLAST of MC08g0622 vs. NCBI nr
Match: XP_022144155.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013914 [Momordica charantia])

HSP 1 Score: 63.9 bits (154), Expect = 3.04e-12
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ
Sbjct: 14 PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 42

BLAST of MC08g0622 vs. NCBI nr
Match: XP_028788419.1 (uncharacterized protein LOC114744414 [Prosopis alba])

HSP 1 Score: 59.7 bits (143), Expect = 8.22e-11
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNS+RP PNPGPRGGLEIVFNQQ
Sbjct: 19 PKGSPSRNSQRPGPNPGPRGGLEIVFNQQ 47

BLAST of MC08g0622 vs. NCBI nr
Match: XP_027348402.1 (uncharacterized protein LOC113859952 [Abrus precatorius])

HSP 1 Score: 57.0 bits (136), Expect = 1.01e-09
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNSRRPEPN G RGGLEIVFNQQ
Sbjct: 21 PKGSPSRNSRRPEPNSGLRGGLEIVFNQQ 49

BLAST of MC08g0622 vs. NCBI nr
Match: XP_022997539.1 (uncharacterized protein LOC111492432, partial [Cucurbita maxima])

HSP 1 Score: 56.6 bits (135), Expect = 1.15e-09
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNSRRP+P+PG RGGLEIVFNQQ
Sbjct: 5  PKGSPSRNSRRPKPSPGLRGGLEIVFNQQ 33

BLAST of MC08g0622 vs. NCBI nr
Match: KAG4978880.1 (hypothetical protein JHK86_038354 [Glycine max] >KAG5114895.1 hypothetical protein JHK82_038164 [Glycine max] >KAG5132176.1 hypothetical protein JHK84_038573 [Glycine max] >KRH23317.1 hypothetical protein GLYMA_13G350200v4 [Glycine max])

HSP 1 Score: 55.5 bits (132), Expect = 5.14e-09
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNSRRP+ N GPRGGLEIVFNQQ
Sbjct: 31 PKGSPSRNSRRPKINSGPRGGLEIVFNQQ 59

BLAST of MC08g0622 vs. ExPASy TrEMBL
Match: A0A6J1CQV3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013914 OS=Momordica charantia OX=3673 GN=LOC111013914 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.47e-12
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ
Sbjct: 14 PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 42

BLAST of MC08g0622 vs. ExPASy TrEMBL
Match: A0A6J1KBP3 (uncharacterized protein LOC111492432 OS=Cucurbita maxima OX=3661 GN=LOC111492432 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.55e-10
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNSRRP+P+PG RGGLEIVFNQQ
Sbjct: 5  PKGSPSRNSRRPKPSPGLRGGLEIVFNQQ 33

BLAST of MC08g0622 vs. ExPASy TrEMBL
Match: K7M3N2 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G350200 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.49e-09
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNSRRP+ N GPRGGLEIVFNQQ
Sbjct: 31 PKGSPSRNSRRPKINSGPRGGLEIVFNQQ 59

BLAST of MC08g0622 vs. ExPASy TrEMBL
Match: A0A1S3V3R7 (uncharacterized protein LOC106771514 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771514 PE=4 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 3.93e-09
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          PKGSPSRNSRRP+ NPG RGGLEIVFNQQ
Sbjct: 20 PKGSPSRNSRRPKLNPGLRGGLEIVFNQQ 48

BLAST of MC08g0622 vs. ExPASy TrEMBL
Match: A0A6P4C744 (LOW QUALITY PROTEIN: uncharacterized protein LOC107467256 OS=Arachis duranensis OX=130453 GN=LOC107467256 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 9.78e-09
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 29
          P GSPSRNS+RP PNPG RGGLEIVFNQQ
Sbjct: 13 PXGSPSRNSQRPGPNPGLRGGLEIVFNQQ 41

BLAST of MC08g0622 vs. TAIR 10
Match: AT3G06895.1 (unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 3.6e-07
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0

Query: 1  PKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 30
          PKGSPSRNSRRP+ + GP GGLEIVFNQQ
Sbjct: 23 PKGSPSRNSRRPKTSLGPGGGLEIVFNQQ 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022144155.13.04e-12100.00LOW QUALITY PROTEIN: uncharacterized protein LOC111013914 [Momordica charantia][more]
XP_028788419.18.22e-1193.10uncharacterized protein LOC114744414 [Prosopis alba][more]
XP_027348402.11.01e-0993.10uncharacterized protein LOC113859952 [Abrus precatorius][more]
XP_022997539.11.15e-0989.66uncharacterized protein LOC111492432, partial [Cucurbita maxima][more]
KAG4978880.15.14e-0989.66hypothetical protein JHK86_038354 [Glycine max] >KAG5114895.1 hypothetical prote... [more]
Match NameE-valueIdentityDescription
A0A6J1CQV31.47e-12100.00LOW QUALITY PROTEIN: uncharacterized protein LOC111013914 OS=Momordica charantia... [more]
A0A6J1KBP35.55e-1089.66uncharacterized protein LOC111492432 OS=Cucurbita maxima OX=3661 GN=LOC111492432... [more]
K7M3N22.49e-0989.66Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G350200 PE=4 SV=1[more]
A0A1S3V3R73.93e-0989.66uncharacterized protein LOC106771514 OS=Vigna radiata var. radiata OX=3916 GN=LO... [more]
A0A6P4C7449.78e-0986.21LOW QUALITY PROTEIN: uncharacterized protein LOC107467256 OS=Arachis duranensis ... [more]
Match NameE-valueIdentityDescription
AT3G06895.13.6e-0782.76unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacter... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0622.1MC08g0622.1mRNA