MC08g0605 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0605
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptioncalmodulin-like
LocationMC08: 4980421 .. 4980675 (+)
RNA-Seq ExpressionMC08g0605
SyntenyMC08g0605
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACTCTCCAGAACTCGGTTGCAGCTGTCGCGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGATATCGACGGAGATGGTGTCCTCAGCATTAGTGAGCTCACCCAAGCCTTCAGTTTCTTAGGCAATCTTCTTCCATTCTACAAAGCTCACTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCTTCATCACTGAGGACGAGCTCGACAGGCTCGTCGAATACGCCATGAAATTTCAGAATAAGAAG

mRNA sequence

ATGGCACTCTCCAGAACTCGGTTGCAGCTGTCGCGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGATATCGACGGAGATGGTGTCCTCAGCATTAGTGAGCTCACCCAAGCCTTCAGTTTCTTAGGCAATCTTCTTCCATTCTACAAAGCTCACTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCTTCATCACTGAGGACGAGCTCGACAGGCTCGTCGAATACGCCATGAAATTTCAGAATAAGAAG

Coding sequence (CDS)

ATGGCACTCTCCAGAACTCGGTTGCAGCTGTCGCGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGATATCGACGGAGATGGTGTCCTCAGCATTAGTGAGCTCACCCAAGCCTTCAGTTTCTTAGGCAATCTTCTTCCATTCTACAAAGCTCACTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCTTCATCACTGAGGACGAGCTCGACAGGCTCGTCGAATACGCCATGAAATTTCAGAATAAGAAG

Protein sequence

MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVEYAMKFQNKK
Homology
BLAST of MC08g0605 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.3e-06
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 13  EEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELD 72
           EEM+ +FR+ D +GDG +S SEL   F  LG+     +    +A ADADGDGFI+ DE  
Sbjct: 39  EEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFA 98

Query: 73  RL 75
            L
Sbjct: 99  AL 100

BLAST of MC08g0605 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.3e-05
Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0

Query: 11  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDE 70
           + EE++E F+  D DG+G +++ ELT   + LG  L   +    +  AD DGDG I  +E
Sbjct: 83  NEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEE 142

Query: 71  LDRLV 76
             R++
Sbjct: 143 FSRVI 147

BLAST of MC08g0605 vs. ExPASy Swiss-Prot
Match: Q9S744 (Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.3e-05
Identity = 23/70 (32.86%), Postives = 41/70 (58.57%), Query Frame = 0

Query: 6   TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGF 65
           T  + + +E+ E+FR  D DGDG++S  EL +    +G  +   +A + +  AD DGDGF
Sbjct: 77  TSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGF 136

Query: 66  ITEDELDRLV 76
           ++  E  +++
Sbjct: 137 LSFHEFSKMM 146

BLAST of MC08g0605 vs. ExPASy Swiss-Prot
Match: Q8X187 (Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-04
Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0

Query: 11  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDE 70
           S EE+KE F+  D DG+G +S +EL    + LG  L   +    +  AD DGDG I  DE
Sbjct: 82  SEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDE 141

Query: 71  LDRLV 76
             +++
Sbjct: 142 FVKMM 146

BLAST of MC08g0605 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 1.6e-04
Identity = 24/65 (36.92%), Postives = 36/65 (55.38%), Query Frame = 0

Query: 11  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDE 70
           S EE++E FR  D DGDG +S +EL    + LG  L   +    +  AD DGDG +  +E
Sbjct: 82  SEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141

Query: 71  LDRLV 76
             +++
Sbjct: 142 FVKMM 146

BLAST of MC08g0605 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus])

HSP 1 Score: 126 bits (316), Expect = 1.01e-35
Identity = 57/85 (67.06%), Postives = 75/85 (88.24%), Query Frame = 0

Query: 1  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADA 60
          M+ + TRLQLSRE++KEIFREHDIDGDG LS++E+ +AF   G++LPFYKAHYG+A+AD 
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGFITEDELDRLVEYAMKFQNKK 85
          +GDGFI E+ELD+LV+YA KFQ+K+
Sbjct: 61 NGDGFIEEEELDKLVDYAQKFQHKR 85

BLAST of MC08g0605 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 126 bits (316), Expect = 1.01e-35
Identity = 56/85 (65.88%), Postives = 76/85 (89.41%), Query Frame = 0

Query: 1  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADA 60
          M+ + ++LQLSRE++KEIFREHDIDGDG LS+SE+ +AF F G++LPFYKAHYG+A+AD 
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGFITEDELDRLVEYAMKFQNKK 85
          +GDG+I E+ELD+LV+YA KFQ+K+
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQHKR 85

BLAST of MC08g0605 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus])

HSP 1 Score: 126 bits (317), Expect = 7.80e-35
Identity = 57/84 (67.86%), Postives = 74/84 (88.10%), Query Frame = 0

Query: 2   ALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADAD 61
           A+  TRLQLSRE++KEIFREHDIDGDG LS++E+ +AF   G++LPFYKAHYG+A+AD +
Sbjct: 83  AIKSTRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADEN 142

Query: 62  GDGFITEDELDRLVEYAMKFQNKK 85
           GDGFI E+ELD+LV+YA KFQ+K+
Sbjct: 143 GDGFIEEEELDKLVDYAQKFQHKR 166

BLAST of MC08g0605 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 2.79e-33
Identity = 53/80 (66.25%), Postives = 67/80 (83.75%), Query Frame = 0

Query: 6  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGF 65
          ++   SREEMKEIFREHDIDGDG LSISEL +A  FLG+ +PFYKAHYG+AY D +GDG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 ITEDELDRLVEYAMKFQNKK 85
          I+EDELD+L++YA +FQ ++
Sbjct: 67 ISEDELDKLIDYAERFQKRR 86

BLAST of MC08g0605 vs. NCBI nr
Match: XP_023002888.1 (calmodulin-like [Cucurbita maxima])

HSP 1 Score: 119 bits (298), Expect = 5.15e-32
Identity = 53/78 (67.95%), Postives = 68/78 (87.18%), Query Frame = 0

Query: 8   LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFIT 67
           ++LSR ++KEIF EHDIDGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDG I+
Sbjct: 83  MKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLIS 142

Query: 68  EDELDRLVEYAMKFQNKK 85
           E+EL++LV+YA +   KK
Sbjct: 143 EEELEKLVDYAERTNKKK 160

BLAST of MC08g0605 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 4.90e-36
Identity = 56/85 (65.88%), Postives = 76/85 (89.41%), Query Frame = 0

Query: 1  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADA 60
          M+ + ++LQLSRE++KEIFREHDIDGDG LS+SE+ +AF F G++LPFYKAHYG+A+AD 
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGFITEDELDRLVEYAMKFQNKK 85
          +GDG+I E+ELD+LV+YA KFQ+K+
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQHKR 85

BLAST of MC08g0605 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 4.90e-36
Identity = 57/85 (67.06%), Postives = 75/85 (88.24%), Query Frame = 0

Query: 1  MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADA 60
          M+ + TRLQLSRE++KEIFREHDIDGDG LS++E+ +AF   G++LPFYKAHYG+A+AD 
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGFITEDELDRLVEYAMKFQNKK 85
          +GDGFI E+ELD+LV+YA KFQ+K+
Sbjct: 61 NGDGFIEEEELDKLVDYAQKFQHKR 85

BLAST of MC08g0605 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 1.35e-33
Identity = 53/80 (66.25%), Postives = 67/80 (83.75%), Query Frame = 0

Query: 6  TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGF 65
          ++   SREEMKEIFREHDIDGDG LSISEL +A  FLG+ +PFYKAHYG+AY D +GDG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 ITEDELDRLVEYAMKFQNKK 85
          I+EDELD+L++YA +FQ ++
Sbjct: 67 ISEDELDKLIDYAERFQKRR 86

BLAST of MC08g0605 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 2.49e-32
Identity = 53/78 (67.95%), Postives = 68/78 (87.18%), Query Frame = 0

Query: 8   LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFIT 67
           ++LSR ++KEIF EHDIDGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDG I+
Sbjct: 83  MKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLIS 142

Query: 68  EDELDRLVEYAMKFQNKK 85
           E+EL++LV+YA +   KK
Sbjct: 143 EEELEKLVDYAERTNKKK 160

BLAST of MC08g0605 vs. ExPASy TrEMBL
Match: A0A6J1GK16 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 2.49e-32
Identity = 53/78 (67.95%), Postives = 68/78 (87.18%), Query Frame = 0

Query: 8   LQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFIT 67
           ++LSR ++KEIF EHDIDGDG LS+SELT+AFSF G+++P YKAHYGLAYADADGDG I+
Sbjct: 83  MKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLIS 142

Query: 68  EDELDRLVEYAMKFQNKK 85
           E+EL++LV+YA +   KK
Sbjct: 143 EEELEKLVDYAERTNKKK 160

BLAST of MC08g0605 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 47.8 bits (112), Expect = 5.2e-06
Identity = 23/70 (32.86%), Postives = 41/70 (58.57%), Query Frame = 0

Query: 6   TRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGF 65
           T  + + +E+ E+FR  D DGDG++S  EL +    +G  +   +A + +  AD DGDGF
Sbjct: 77  TSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGF 136

Query: 66  ITEDELDRLV 76
           ++  E  +++
Sbjct: 137 LSFHEFSKMM 146

BLAST of MC08g0605 vs. TAIR 10
Match: AT5G17470.1 (EF hand calcium-binding protein family )

HSP 1 Score: 45.4 bits (106), Expect = 2.6e-05
Identity = 27/71 (38.03%), Postives = 36/71 (50.70%), Query Frame = 0

Query: 15  MKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRL 74
           MKE F  +DIDGDG +S SE+      LG      +    +   DADGDGF++ +E   +
Sbjct: 78  MKEAFDLYDIDGDGKISASEIHVVLKRLGEKQTIAECIAMVRAVDADGDGFVSFEEFKTM 137

Query: 75  VEYAMKFQNKK 86
               M   NKK
Sbjct: 138 ----MSCNNKK 144

BLAST of MC08g0605 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 44.3 bits (103), Expect = 5.7e-05
Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 11  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDE 70
           S EE+KE FR  D D +G +S +EL    + LG  L   +    +  AD DGDG I  +E
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 141

Query: 71  LDRLV 76
             +++
Sbjct: 142 FVKIM 146

BLAST of MC08g0605 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 )

HSP 1 Score: 44.3 bits (103), Expect = 5.7e-05
Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 11  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDE 70
           S EE+KE FR  D D +G +S +EL    + LG  L   +    +  AD DGDG I  +E
Sbjct: 92  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 151

Query: 71  LDRLV 76
             +++
Sbjct: 152 FVKIM 156

BLAST of MC08g0605 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 )

HSP 1 Score: 44.3 bits (103), Expect = 5.7e-05
Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 11  SREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDE 70
           S EE+KE FR  D D +G +S +EL    + LG  L   +    +  AD DGDG I  +E
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 141

Query: 71  LDRLV 76
             +++
Sbjct: 142 FVKIM 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8RZB52.3e-0646.77Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
P059334.3e-0535.38Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c... [more]
Q9S7447.3e-0532.86Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1[more]
Q8X1871.2e-0438.46Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3[more]
P621841.6e-0436.92Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
KGN62516.11.01e-3567.06hypothetical protein Csa_022521 [Cucumis sativus][more]
KAA0060892.11.01e-3565.88putative calcium-binding protein CML10 [Cucumis melo var. makuwa][more]
XP_004152805.17.80e-3567.86probable calcium-binding protein CML10 [Cucumis sativus][more]
KGN62525.12.79e-3366.25hypothetical protein Csa_022453 [Cucumis sativus][more]
XP_023002888.15.15e-3267.95calmodulin-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A5A7UYC04.90e-3665.88Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0LRC14.90e-3667.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1[more]
A0A0A0LKX11.35e-3366.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1[more]
A0A6J1KUW22.49e-3267.95calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1[more]
A0A6J1GK162.49e-3267.95calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G51920.15.2e-0632.86calmodulin 9 [more]
AT5G17470.12.6e-0538.03EF hand calcium-binding protein family [more]
AT1G66410.15.7e-0536.92calmodulin 4 [more]
AT1G66410.25.7e-0536.92calmodulin 4 [more]
AT5G37780.15.7e-0536.92calmodulin 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 58..75
e-value: 2.7E-4
score: 20.3
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 14..43
e-value: 4.5E-7
score: 29.2
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 59..81
score: 8.739058
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 10..45
score: 14.84815
NoneNo IPR availableGENE3D1.10.238.10coord: 1..83
e-value: 3.9E-13
score: 51.7
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 23..35
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 59..71
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 8..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0605.1MC08g0605.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding