MC08g0598 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g0598
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	MC08: 4936327 .. 4938305 (+)
RNA-Seq Expression	MC08g0598
Synteny	MC08g0598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCATTACCATGTCATTATTCAATCTCGTCGGTCCAAAACAAAAAGGGGAAAGCTGAAAATTAAACTTTGAAGTATTGAAGCTGAAGAAGTAATTGCAAAAATGAAAAAATTATAAATTTCAAATGACGTATAACTACCCACTGATCCAAATATGAAAGATGATGAAATCTTGAGCTAAAGCCAACTGAACCCACCAGGACACGCGTCCACAAAACTCACCCCATCAGATAAAACCCCCCAAAGAAAAAGAAAAAAGGACGGAAATAATGAAATATAGAGAGCAAAGAAAGTGGATAATAGCCACCAATCACTTTGCCATTTTTTTTGGAGGAGATGGCGGTTTCTTCACTCTCAGCGGCCACACCCTTGGCTGTGCAGGTGCGGCCCTGTTCTAGTTCTTGGTCTCCCTCCGCCATTTCCAACACCTTCTTTTCTCCATCATTCACCCCAAGAGAAAGACCACACTCCCACTCCCACTCCCACTCCCGACGGACAATCGTGGCCCGAGCCCAAGCTCAGCCGCGCCGGACTTGGCTCCCCGGCCTCGACCCCCCACCGCACCTCGACGGAAGGTCAGCCTTAGCCCCTCAAATTCAACTAATTCTAACTCTTCTTTCTCCCCTCGTAATGCTCTTTCTGCAGTCTGGCCGGCGATTTCGGATTCGACCCACTTGGGCTCGCCGAGGACCCCGAAAGCTTGAAGTGGTACGTCCAAGCGGAGCTCCTCCATTCTCGATTCGCCATGCTCGGAATCTCCGGAATTCTCCTCACAGACGTCTGTATACCCTACACACATTACCCAATTCTTACCCCCACAACACACAATAATAATCATCCTCTTCTTCTTCTTCTTTGTGCCAGCTGCTTCGTGTTACAGGAGTCAGCAAAGTACCAGTTTGGTACACTGCGGGTGCGGCGGAATACGGGTTCGCCAATAAAGAAACCCTCTTCATCGTTCAGCTGCTGTTGATGGGGTCCCAAATTCTGTCTCTCCCGTCATTTCTTTCTGCTTTGTCTGTTCCTGTTCCTGTTCCTGTATGTGGCAGTGATCGTTTTTTCCTTTTCTTTATAGGTTTGTAGAAACCAAAAGATACATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGGTTGGAAGCCGCTCTCGAAGGTCTCGAGCCCGGGTAATGTACAACATTTCAACTTATCTGGAAACTCGTATGATTTCATTTCAATATCTTAACTCAACCAGTAGTTTATCTAAGCAAATGAAAAGGGAGTATTTGTTATTTTATTTCCCCTTTGATTTGAACCTTATGGATTGAACATCCTTGAGCTTTAATTGACTTACAGATACCCTGGGGGTCCTCTGCTGAATCCACTAGGCCTGGCTAAAGATATCAAGAATGCCCATGACTGGAAGCTCAAGGAGATTAAGAATGGTTCAGTTTTCCACTCACATTGTTGAATTTTCATTTTCTTCTTCGTTTTGGACTAATCCTTATTCCTTCGTACAGGACGGTTAGCGATGGTAGCCATGGTTGGGATCTTCGTGCAGGCTTATGTAACTCACGCAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTCTCAAGCTCAAGTCCTTGAAGAAGAAGAAGATAAGGAACTCAAGTCTTCTAATAATTTATCAAATTACGGCGATAAAATCACTGATTCTTTTACACAGAAAAAATACTTATCAAGAATATGGTTCCCAAGAACTCACATCATATGAAGGGCCAGAGCAAGTTTGTATCATATTTTTGGTTTTCTTTACTACTATTCTATGAAAGGTGGAAGTATGCAAGAATAATGACAAAATCAAATTTGAAGTGCAGAAGACGAATATTTGCTTATGGCTGCAAGAATCCTCTCTTTATCTCTGGTAGGAAATGCTTCTAATAAGACCCCATCTTTATAGAAATGGAACAG

mRNA sequence

TAGCATTACCATGTCATTATTCAATCTCGTCGGTCCAAAACAAAAAGGGGAAAGCTGAAAATTAAACTTTGAAGTATTGAAGCTGAAGAAGTAATTGCAAAAATGAAAAAATTATAAATTTCAAATGACGTATAACTACCCACTGATCCAAATATGAAAGATGATGAAATCTTGAGCTAAAGCCAACTGAACCCACCAGGACACGCGTCCACAAAACTCACCCCATCAGATAAAACCCCCCAAAGAAAAAGAAAAAAGGACGGAAATAATGAAATATAGAGAGCAAAGAAAGTGGATAATAGCCACCAATCACTTTGCCATTTTTTTTGGAGGAGATGGCGGTTTCTTCACTCTCAGCGGCCACACCCTTGGCTGTGCAGGTGCGGCCCTGTTCTAGTTCTTGGTCTCCCTCCGCCATTTCCAACACCTTCTTTTCTCCATCATTCACCCCAAGAGAAAGACCACACTCCCACTCCCACTCCCACTCCCGACGGACAATCGTGGCCCGAGCCCAAGCTCAGCCGCGCCGGACTTGGCTCCCCGGCCTCGACCCCCCACCGCACCTCGACGGAAGTCTGGCCGGCGATTTCGGATTCGACCCACTTGGGCTCGCCGAGGACCCCGAAAGCTTGAAGTGGTACGTCCAAGCGGAGCTCCTCCATTCTCGATTCGCCATGCTCGGAATCTCCGGAATTCTCCTCACAGACCTGCTTCGTGTTACAGGAGTCAGCAAAGTACCAGTTTGGTACACTGCGGGTGCGGCGGAATACGGGTTCGCCAATAAAGAAACCCTCTTCATCGTTCAGCTGCTGTTGATGGGGTTTGTAGAAACCAAAAGATACATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGGTTGGAAGCCGCTCTCGAAGGTCTCGAGCCCGGATACCCTGGGGGTCCTCTGCTGAATCCACTAGGCCTGGCTAAAGATATCAAGAATGCCCATGACTGGAAGCTCAAGGAGATTAAGAATGGACGGTTAGCGATGGTAGCCATGGTTGGGATCTTCGTGCAGGCTTATGTAACTCACGCAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTCTCAAGCTCAAGTCCTTGAAGAAGAAGAAGATAAGGAACTCAAGTCTTCTAATAATTTATCAAATTACGGCGATAAAATCACTGATTCTTTTACACAGAAAAAATACTTATCAAGAATATGGTTCCCAAGAACTCACATCATATGAAGGGCCAGAGCAAGTTTGTATCATATTTTTGGTTTTCTTTACTACTATTCTATGAAAGGTGGAAGTATGCAAGAATAATGACAAAATCAAATTTGAAGTGCAGAAGACGAATATTTGCTTATGGCTGCAAGAATCCTCTCTTTATCTCTGGTAGGAAATGCTTCTAATAAGACCCCATCTTTATAGAAATGGAACAG

Coding sequence (CDS)

ATGGCGGTTTCTTCACTCTCAGCGGCCACACCCTTGGCTGTGCAGGTGCGGCCCTGTTCTAGTTCTTGGTCTCCCTCCGCCATTTCCAACACCTTCTTTTCTCCATCATTCACCCCAAGAGAAAGACCACACTCCCACTCCCACTCCCACTCCCGACGGACAATCGTGGCCCGAGCCCAAGCTCAGCCGCGCCGGACTTGGCTCCCCGGCCTCGACCCCCCACCGCACCTCGACGGAAGTCTGGCCGGCGATTTCGGATTCGACCCACTTGGGCTCGCCGAGGACCCCGAAAGCTTGAAGTGGTACGTCCAAGCGGAGCTCCTCCATTCTCGATTCGCCATGCTCGGAATCTCCGGAATTCTCCTCACAGACCTGCTTCGTGTTACAGGAGTCAGCAAAGTACCAGTTTGGTACACTGCGGGTGCGGCGGAATACGGGTTCGCCAATAAAGAAACCCTCTTCATCGTTCAGCTGCTGTTGATGGGGTTTGTAGAAACCAAAAGATACATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGGTTGGAAGCCGCTCTCGAAGGTCTCGAGCCCGGATACCCTGGGGGTCCTCTGCTGAATCCACTAGGCCTGGCTAAAGATATCAAGAATGCCCATGACTGGAAGCTCAAGGAGATTAAGAATGGACGGTTAGCGATGGTAGCCATGGTTGGGATCTTCGTGCAGGCTTATGTAACTCACGCAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTCTCAAGCTCAAGTCCTTGA

Protein sequence

MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQAQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP

Homology

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BLAST of MC08g0598 vs. ExPASy Swiss-Prot
Match: Q9C639 (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA5 PE=1 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.1e-99
Identity = 170/213 (79.81%), Postives = 192/213 (90.14%), Query Frame = 0


Query: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120
           A  R TWLPGL+PPP+LDG+LAGD+GFDPLGL EDPESLKWYVQAEL+HSRFAMLG++GI
Sbjct: 43  AVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGI 102

Query: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ 180
           L TDLLR TG+  +PVWY AGA ++ FA+ +TL +VQ LLMGF ETKRYMDF SPGSQA+
Sbjct: 103 LFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAK 162

Query: 181 EGT-FFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFV 240
           EG+ FFGLEAALEGLEPGYPGGPLLNPLGLAKD++NAHDWKLKEIKNGRLAM+AM+G FV
Sbjct: 163 EGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFV 222

Query: 241 QAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSS 273
           QA VTH GPIDNLVEHLSNPWHKTIIQTL +S+
Sbjct: 223 QASVTHTGPIDNLVEHLSNPWHKTIIQTLFTST 255

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BLAST of MC08g0598 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.2e-54
Identity = 105/205 (51.22%), Postives = 142/205 (69.27%), Query Frame = 0


Query: 67  WLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGILLTDLL 126
           WLPGL  P +L GSL GD GFDPLGLAEDPE+L+W+VQAEL++ R+AMLG++G+LL ++ 
Sbjct: 56  WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVF 115

Query: 127 RVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFG 186
              G+  VP WY AG  EY FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F  
Sbjct: 116 TSIGIINVPKWYAAGKEEY-FASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIF-- 175

Query: 187 LEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQAYVTHA 246
            + +L   E GYPGG + NPL  A  +    + K KEI NGRLAM+A +G  +Q  VT  
Sbjct: 176 KQYSLPAGEVGYPGG-IFNPLNFAPTL----EAKEKEIANGRLAMLAFLGFIIQHNVTGK 235

Query: 247 GPIDNLVEHLSNPWHKTIIQTLSSS 272
           GP DNL++H+S+PWH TI+QTL  +
Sbjct: 236 GPFDNLLQHISDPWHNTIVQTLGGN 252

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BLAST of MC08g0598 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-53
Identity = 105/203 (51.72%), Postives = 141/203 (69.46%), Query Frame = 0


Query: 67  WLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGILLTDLL 126
           WLPGL  P +L GSLAGD GFDPLGLAEDPE+LKW+VQAEL++ R+AMLG++G+LL ++ 
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVF 116

Query: 127 RVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFG 186
              G+  VP WY AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F  
Sbjct: 117 TKIGIINVPEWYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF-- 176

Query: 187 LEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQAYVTHA 246
            + +L   E GYPGG + NPL  A       + K KE+ NGRLAM+A +G  VQ  VT  
Sbjct: 177 KQYSLPKGEVGYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFLGFVVQHNVTGK 236

Query: 247 GPIDNLVEHLSNPWHKTIIQTLS 270
           GP +NL++HLS+PWH TI+QT +
Sbjct: 237 GPFENLLQHLSDPWHNTIVQTFN 251

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BLAST of MC08g0598 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.7e-50
Identity = 107/221 (48.42%), Postives = 133/221 (60.18%), Query Frame = 0


Query: 51  SRRTIVARAQAQP-RRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLH 110
           SR   V+   A P R  W PG  PP  LDGSL GDFGFDPLGL  DPESLKW  QAEL+H
Sbjct: 51  SRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVH 110

Query: 111 SRFAMLGISGILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRY 170
           SR+AMLG +GI + + L   GV   P WYTAG  EY F +  TLF+++L+L+G+ E +R+
Sbjct: 111 SRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEY-FTDTTTLFVIELVLIGWAEGRRW 170

Query: 171 MDFKSPGSQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAK-DIKNAHDWKLKEIKNGR 230
            D   PG    +  F      L G + GYPGG   +PLG          + + KEIKNGR
Sbjct: 171 ADIIKPGCVNTDPIF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGR 230

Query: 231 LAMVAMVGIFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLS 270
           LAM+A++G + Q   T  GPIDNL  HL++P H TI    S
Sbjct: 231 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268

[Close]

BLAST of MC08g0598 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.3e-50
Identity = 103/212 (48.58%), Postives = 133/212 (62.74%), Query Frame = 0


Query: 54  TIVARAQAQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFA 113
           ++ A A    R  W PG  PP  LDGSL GDFGFDPLGL+ DP+SLKW VQAE++H R+A
Sbjct: 42  SVRAVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWA 101

Query: 114 MLGISGILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFK 173
           MLG +GI + + L   G+   P WYTAG  EY F +K TLF+V+L+L+G+ E +R+ D  
Sbjct: 102 MLGAAGIFIPEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADII 161

Query: 174 SPGSQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAK-DIKNAHDWKLKEIKNGRLAMV 233
            PGS   +  F      L G + GYPGG   +PLG          + + KEIKNGRLAM+
Sbjct: 162 KPGSVNTDPVF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAML 221

Query: 234 AMVGIFVQAYVTHAGPIDNLVEHLSNPWHKTI 265
           A++G + Q   T  GPIDNL  HL++P H TI
Sbjct: 222 AVMGAWFQHIYTGTGPIDNLFAHLADPGHATI 250

[Close]

BLAST of MC08g0598 vs. NCBI nr
Match: XP_022144176.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 547 bits (1410), Expect = 2.05e-196
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60
           MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ
Sbjct: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60

Query: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120
           AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI
Sbjct: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120

Query: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ 180
           LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ
Sbjct: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ 180

Query: 181 EGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQ 240
           EGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQ
Sbjct: 181 EGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQ 240

Query: 241 AYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273
           AYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP
Sbjct: 241 AYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273

[Close]

BLAST of MC08g0598 vs. NCBI nr
Match: XP_022144175.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 541 bits (1395), Expect = 4.60e-194
Identity = 273/277 (98.56%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60
           MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ
Sbjct: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60

Query: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120
           AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI
Sbjct: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120

Query: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPG 180
           LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMG    FVETKRYMDFKSPG
Sbjct: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGSQILFVETKRYMDFKSPG 180

Query: 181 SQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVG 240
           SQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVG
Sbjct: 181 SQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVG 240

Query: 241 IFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273
           IFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP
Sbjct: 241 IFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 277

[Close]

BLAST of MC08g0598 vs. NCBI nr
Match: XP_004150882.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus] >KGN62506.1 hypothetical protein Csa_022315 [Cucumis sativus])

HSP 1 Score: 421 bits (1083), Expect = 8.34e-147
Identity = 218/274 (79.56%), Postives = 239/274 (87.23%), Query Frame = 0


Query: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTI-VARA 60
           MAVS  SAAT  A+ + P SSS++P       F+PS   R R      S SRRT+ +A A
Sbjct: 1   MAVS-FSAAT--ALHLHPSSSSYTP------LFNPSQFLRLR------SPSRRTLLIAHA 60

Query: 61  QAQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISG 120
           Q++ R+TWLPGLDPPPHLDG+LAGDFGFDPLGL EDP+SLKWYVQAEL+H RFAMLG+SG
Sbjct: 61  QSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSG 120

Query: 121 ILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQA 180
           +LLTDLLRVTG+S++PVWY AGA EYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQA
Sbjct: 121 VLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQA 180

Query: 181 QEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFV 240
           QEGTFFGLEAA +GLEPGYPGGPLLNPLG+AKDIKNAHDWKLKEIKNGRLAMVAM+GIFV
Sbjct: 181 QEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFV 240

Query: 241 QAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273
           QAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Sbjct: 241 QAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP 259

[Close]

BLAST of MC08g0598 vs. NCBI nr
Match: XP_038886221.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispida])

HSP 1 Score: 419 bits (1077), Expect = 7.61e-146
Identity = 215/272 (79.04%), Postives = 236/272 (86.76%), Query Frame = 0


Query: 1   MAVS-SLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTI-VAR 60
           MAVS S + A   A  ++P SSS S        ++PSF P +       S SRRT+ +A+
Sbjct: 1   MAVSVSAATARATAFHLQPSSSSSS--------YTPSFNPNQS--LRLRSPSRRTLLIAQ 60

Query: 61  AQAQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGIS 120
           AQ++ R+TWLPGLDPPPHLDG+LAGDFGFDPLGL EDP SLKWYVQAEL+HSRFAMLG+S
Sbjct: 61  AQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVS 120

Query: 121 GILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ 180
           GILLTDLLRVTG+S++PVWY AGA EYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ
Sbjct: 121 GILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ 180

Query: 181 AQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIF 240
           AQEGTFFGLEAA EGLEPGYPGGPLLNPLG+AKDIKNAH+WKLKEIKNGRLAMVAM+GIF
Sbjct: 181 AQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHEWKLKEIKNGRLAMVAMLGIF 240

Query: 241 VQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSS 270
           VQAYVTH GPIDNLVEHLSNPWHKTIIQTLSS
Sbjct: 241 VQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS 262

[Close]

BLAST of MC08g0598 vs. NCBI nr
Match: XP_023001834.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita maxima])

HSP 1 Score: 415 bits (1067), Expect = 2.28e-144
Identity = 216/275 (78.55%), Postives = 232/275 (84.36%), Query Frame = 0


Query: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60
           MAVS LSAATP    + P SS +S S  S                   S SRRT+ A+AQ
Sbjct: 1   MAVS-LSAATPF--HLLPSSSLYSSSLSSKQHL-------------LRSPSRRTVTAQAQ 60

Query: 61  AQ--PRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGIS 120
           +Q  PR+TWLPGLDPPPHLDG+LAGDFGFDPLGL EDP SLKW+VQAEL+HSRFAMLG+S
Sbjct: 61  SQSQPRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWFVQAELVHSRFAMLGVS 120

Query: 121 GILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ 180
           GILLTDLLRVTG+S++PVWY AGA EYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ
Sbjct: 121 GILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ 180

Query: 181 AQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIF 240
           AQEGTFFGLE+A EGLEPGYPGGPLLNPLGLAKDIKNAH+WKLKEIKNGRLAMVAM+GIF
Sbjct: 181 AQEGTFFGLESAFEGLEPGYPGGPLLNPLGLAKDIKNAHEWKLKEIKNGRLAMVAMLGIF 240

Query: 241 VQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273
           VQAYVT  GPIDNLVEHLSNPWH TII TLSSSSP
Sbjct: 241 VQAYVTQTGPIDNLVEHLSNPWHNTIIHTLSSSSP 259

[Close]

BLAST of MC08g0598 vs. ExPASy TrEMBL
Match: A0A6J1CSJ3 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013928 PE=3 SV=1)

HSP 1 Score: 547 bits (1410), Expect = 9.92e-197
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60
           MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ
Sbjct: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60

Query: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120
           AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI
Sbjct: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120

Query: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ 180
           LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ
Sbjct: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ 180

Query: 181 EGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQ 240
           EGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQ
Sbjct: 181 EGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQ 240

Query: 241 AYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273
           AYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP
Sbjct: 241 AYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273

[Close]

BLAST of MC08g0598 vs. ExPASy TrEMBL
Match: A0A6J1CQX2 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013928 PE=3 SV=1)

HSP 1 Score: 541 bits (1395), Expect = 2.23e-194
Identity = 273/277 (98.56%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60
           MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ
Sbjct: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60

Query: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120
           AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI
Sbjct: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120

Query: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPG 180
           LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMG    FVETKRYMDFKSPG
Sbjct: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGSQILFVETKRYMDFKSPG 180

Query: 181 SQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVG 240
           SQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVG
Sbjct: 181 SQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVG 240

Query: 241 IFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273
           IFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP
Sbjct: 241 IFVQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 277

[Close]

BLAST of MC08g0598 vs. ExPASy TrEMBL
Match: A0A0A0LRB4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_2G357290 PE=3 SV=1)

HSP 1 Score: 421 bits (1083), Expect = 4.04e-147
Identity = 218/274 (79.56%), Postives = 239/274 (87.23%), Query Frame = 0


Query: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTI-VARA 60
           MAVS  SAAT  A+ + P SSS++P       F+PS   R R      S SRRT+ +A A
Sbjct: 1   MAVS-FSAAT--ALHLHPSSSSYTP------LFNPSQFLRLR------SPSRRTLLIAHA 60

Query: 61  QAQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISG 120
           Q++ R+TWLPGLDPPPHLDG+LAGDFGFDPLGL EDP+SLKWYVQAEL+H RFAMLG+SG
Sbjct: 61  QSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSG 120

Query: 121 ILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQA 180
           +LLTDLLRVTG+S++PVWY AGA EYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQA
Sbjct: 121 VLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQA 180

Query: 181 QEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFV 240
           QEGTFFGLEAA +GLEPGYPGGPLLNPLG+AKDIKNAHDWKLKEIKNGRLAMVAM+GIFV
Sbjct: 181 QEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFV 240

Query: 241 QAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273
           QAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Sbjct: 241 QAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP 259

[Close]

BLAST of MC08g0598 vs. ExPASy TrEMBL
Match: A0A6J1KNS0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495909 PE=3 SV=1)

HSP 1 Score: 415 bits (1067), Expect = 1.10e-144
Identity = 216/275 (78.55%), Postives = 232/275 (84.36%), Query Frame = 0


Query: 1   MAVSSLSAATPLAVQVRPCSSSWSPSAISNTFFSPSFTPRERPHSHSHSHSRRTIVARAQ 60
           MAVS LSAATP    + P SS +S S  S                   S SRRT+ A+AQ
Sbjct: 1   MAVS-LSAATPF--HLLPSSSLYSSSLSSKQHL-------------LRSPSRRTVTAQAQ 60

Query: 61  AQ--PRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGIS 120
           +Q  PR+TWLPGLDPPPHLDG+LAGDFGFDPLGL EDP SLKW+VQAEL+HSRFAMLG+S
Sbjct: 61  SQSQPRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWFVQAELVHSRFAMLGVS 120

Query: 121 GILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ 180
           GILLTDLLRVTG+S++PVWY AGA EYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ
Sbjct: 121 GILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQ 180

Query: 181 AQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIF 240
           AQEGTFFGLE+A EGLEPGYPGGPLLNPLGLAKDIKNAH+WKLKEIKNGRLAMVAM+GIF
Sbjct: 181 AQEGTFFGLESAFEGLEPGYPGGPLLNPLGLAKDIKNAHEWKLKEIKNGRLAMVAMLGIF 240

Query: 241 VQAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSSP 273
           VQAYVT  GPIDNLVEHLSNPWH TII TLSSSSP
Sbjct: 241 VQAYVTQTGPIDNLVEHLSNPWHNTIIHTLSSSSP 259

[Close]

BLAST of MC08g0598 vs. ExPASy TrEMBL
Match: A0A6J1GH16 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454144 PE=3 SV=1)

HSP 1 Score: 414 bits (1063), Expect = 4.03e-144
Identity = 202/244 (82.79%), Postives = 222/244 (90.98%), Query Frame = 0


Query: 29  SNTFFSPSFTPRERPHSHSHSHSRRTIVARAQAQ--PRRTWLPGLDPPPHLDGSLAGDFG 88
           S++F+S S +P++       S SRRT+ A+AQ+Q  PR+TWLPGLDPPPHLDG+LAGDFG
Sbjct: 16  SSSFYSSSLSPKQHL---LRSPSRRTVTAQAQSQSQPRQTWLPGLDPPPHLDGTLAGDFG 75

Query: 89  FDPLGLAEDPESLKWYVQAELLHSRFAMLGISGILLTDLLRVTGVSKVPVWYTAGAAEYG 148
           FDPLGL EDP SLKW+VQAEL+HSRFAMLG+SGILLTDLLRVTG+S++PVWY AGA EYG
Sbjct: 76  FDPLGLGEDPHSLKWFVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYG 135

Query: 149 FANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAALEGLEPGYPGGPLLNP 208
           FANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+A EGLEPGYPGGPLLNP
Sbjct: 136 FANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESAFEGLEPGYPGGPLLNP 195

Query: 209 LGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQAYVTHAGPIDNLVEHLSNPWHKTIIQ 268
           LGLAKDIKNAHDWKLKEIKNGRLAMVAM+GIFVQAYVT  GPIDNLVEHLSNPWH T+I 
Sbjct: 196 LGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTQTGPIDNLVEHLSNPWHNTVIH 255

Query: 269 TLSS 270
           TLSS
Sbjct: 256 TLSS 256

[Close]

BLAST of MC08g0598 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 364.4 bits (934), Expect = 8.1e-101
Identity = 170/213 (79.81%), Postives = 192/213 (90.14%), Query Frame = 0


Query: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120
           A  R TWLPGL+PPP+LDG+LAGD+GFDPLGL EDPESLKWYVQAEL+HSRFAMLG++GI
Sbjct: 43  AVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGI 102

Query: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ 180
           L TDLLR TG+  +PVWY AGA ++ FA+ +TL +VQ LLMGF ETKRYMDF SPGSQA+
Sbjct: 103 LFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAK 162

Query: 181 EGT-FFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFV 240
           EG+ FFGLEAALEGLEPGYPGGPLLNPLGLAKD++NAHDWKLKEIKNGRLAM+AM+G FV
Sbjct: 163 EGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFV 222

Query: 241 QAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSS 273
           QA VTH GPIDNLVEHLSNPWHKTIIQTL +S+
Sbjct: 223 QASVTHTGPIDNLVEHLSNPWHKTIIQTLFTST 255

[Close]

BLAST of MC08g0598 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 364.4 bits (934), Expect = 8.1e-101
Identity = 170/213 (79.81%), Postives = 192/213 (90.14%), Query Frame = 0


Query: 61  AQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGI 120
           A  R TWLPGL+PPP+LDG+LAGD+GFDPLGL EDPESLKWYVQAEL+HSRFAMLG++GI
Sbjct: 43  AVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGI 102

Query: 121 LLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQ 180
           L TDLLR TG+  +PVWY AGA ++ FA+ +TL +VQ LLMGF ETKRYMDF SPGSQA+
Sbjct: 103 LFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAK 162

Query: 181 EGT-FFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFV 240
           EG+ FFGLEAALEGLEPGYPGGPLLNPLGLAKD++NAHDWKLKEIKNGRLAM+AM+G FV
Sbjct: 163 EGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFV 222

Query: 241 QAYVTHAGPIDNLVEHLSNPWHKTIIQTLSSSS 273
           QA VTH GPIDNLVEHLSNPWHKTIIQTL +S+
Sbjct: 223 QASVTHTGPIDNLVEHLSNPWHKTIIQTLFTST 255

[Close]

BLAST of MC08g0598 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-54
Identity = 105/203 (51.72%), Postives = 141/203 (69.46%), Query Frame = 0


Query: 67  WLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFAMLGISGILLTDLL 126
           WLPGL  P +L GSLAGD GFDPLGLAEDPE+LKW+VQAEL++ R+AMLG++G+LL ++ 
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVF 116

Query: 127 RVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFG 186
              G+  VP WY AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F  
Sbjct: 117 TKIGIINVPEWYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF-- 176

Query: 187 LEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQAYVTHA 246
            + +L   E GYPGG + NPL  A       + K KE+ NGRLAM+A +G  VQ  VT  
Sbjct: 177 KQYSLPKGEVGYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFLGFVVQHNVTGK 236

Query: 247 GPIDNLVEHLSNPWHKTIIQTLS 270
           GP +NL++HLS+PWH TI+QT +
Sbjct: 237 GPFENLLQHLSDPWHNTIVQTFN 251

[Close]

BLAST of MC08g0598 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 199.1 bits (505), Expect = 4.5e-51
Identity = 103/212 (48.58%), Postives = 133/212 (62.74%), Query Frame = 0


Query: 54  TIVARAQAQPRRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESLKWYVQAELLHSRFA 113
           ++ A A    R  W PG  PP  LDGSL GDFGFDPLGL+ DP+SLKW VQAE++H R+A
Sbjct: 42  SVRAVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWA 101

Query: 114 MLGISGILLTDLLRVTGVSKVPVWYTAGAAEYGFANKETLFIVQLLLMGFVETKRYMDFK 173
           MLG +GI + + L   G+   P WYTAG  EY F +K TLF+V+L+L+G+ E +R+ D  
Sbjct: 102 MLGAAGIFIPEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADII 161

Query: 174 SPGSQAQEGTFFGLEAALEGLEPGYPGGPLLNPLGLAK-DIKNAHDWKLKEIKNGRLAMV 233
            PGS   +  F      L G + GYPGG   +PLG          + + KEIKNGRLAM+
Sbjct: 162 KPGSVNTDPVF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAML 221

Query: 234 AMVGIFVQAYVTHAGPIDNLVEHLSNPWHKTI 265
           A++G + Q   T  GPIDNL  HL++P H TI
Sbjct: 222 AVMGAWFQHIYTGTGPIDNLFAHLADPGHATI 250

[Close]

BLAST of MC08g0598 vs. TAIR 10
Match: AT1G61520.1 (photosystem I light harvesting complex gene 3 )

HSP 1 Score: 175.3 bits (443), Expect = 6.9e-44
Identity = 98/244 (40.16%), Postives = 140/244 (57.38%), Query Frame = 0


Query: 47  SHSHSRRTIVARAQAQP-------RRTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPESL 106
           S S  + + V +A A P       R  W        +LDGSL GD+GFDPLGL+ DPE  
Sbjct: 29  SASQKKSSFVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLS-DPEGT 88

Query: 107 ------KWYVQAELLHSRFAMLGISGILLTDLLRVTGVSKVPV---WYTAG----AAEYG 166
                 +W    E+++ RFAMLG +G +  ++L   G+        W+  G    A  Y 
Sbjct: 89  GGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYT 148

Query: 167 F-ANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAALEGL-EPGYPGGPLL 226
           + A+  TLF++++ LMGF E +R  D+ +PGS  ++  F GLE  L G   P YPGGP  
Sbjct: 149 YWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQ-YFLGLEKGLAGSGNPAYPGGPFF 208

Query: 227 NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMVGIFVQAYVTHAGPIDNLVEHLSNPWHKTI 269
           NPLG  KD K+  + KLKE+KNGRLAM+A++G F+Q  VT  GP  NL++HL++P +  +
Sbjct: 209 NPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNV 268

The following BLAST results are available for this feature:

BLAST of MC08g0598 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C639	1.1e-99	79.81	Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis th...	[more]
Q9SQL2	4.2e-54	51.22	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	1.6e-53	51.72	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P13869	3.7e-50	48.42	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
Q9SYW8	6.3e-50	48.58	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]

BLAST of MC08g0598 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144176.1	2.05e-196	100.00	photosystem I chlorophyll a/b-binding protein 5, chloroplastic isoform X2 [Momor...	[more]
XP_022144175.1	4.60e-194	98.56	photosystem I chlorophyll a/b-binding protein 5, chloroplastic isoform X1 [Momor...	[more]
XP_004150882.1	8.34e-147	79.56	photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus]...	[more]
XP_038886221.1	7.61e-146	79.04	photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispid...	[more]
XP_023001834.1	2.28e-144	78.55	photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita maxima...	[more]

BLAST of MC08g0598 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSJ3	9.92e-197	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CQX2	2.23e-194	98.56	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0LRB4	4.04e-147	79.56	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1KNS0	1.10e-144	78.55	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GH16	4.03e-144	82.79	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of MC08g0598 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45474.1	8.1e-101	79.81	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	8.1e-101	79.81	photosystem I light harvesting complex gene 5	[more]
AT3G47470.1	1.1e-54	51.72	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT3G61470.1	4.5e-51	48.58	photosystem I light harvesting complex gene 2	[more]
AT1G61520.1	6.9e-44	40.16	photosystem I light harvesting complex gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 73..242 e-value: 1.9E-47 score: 161.8
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 65..272 e-value: 1.0E-60 score: 207.0
None	No IPR available	PANTHER	PTHR21649:SF67	PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC	coord: 41..270
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 60..270
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 41..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g0598.1	MC08g0598.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding