MC08g0493 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g0493
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	leucine-rich repeat extensin-like protein 3
Location	MC08: 4012717 .. 4013271 (+)
RNA-Seq Expression	MC08g0493
Synteny	MC08g0493

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACATTTCAGAAGAATTTTCCATTTCTCTTGCCTCTCGATTCTTCTGATCATTGACCTCGCCGGAGCTGCGGCGGCGTCTGAAGACCACCGTCTGGTCGAGGTGGTCCCTCCGGTCAGTCTACTCTGTATCAGCGAGTGTTCAACTTGCCCTGTCATATGCTCGCCGCCGCCGCCGCCCACGGCGGCTCTCAAGTCACCTCCGCCCCACTCGCCGCCGCTGGCCTACGTCCCACTCAACGCACCCCCATCCCCGTCCCCACCTCGGCCAACCCCGTCACCGTCTCCGCCGCCGCCGCCGCCGCCGTCGCCACCGCTGGCGGCTTTATCTCATCCTCCACCGCCTCCTGCTTTCAATTACTACTTTAACTTGCCTCCACCGCCGCCGGTGCTGATTCCGGTACCTGTGCCGCCGAAGACGGCGGCGCCTCATGGAAATACGAATTCCAATGCTTATAATTACTACTTCTACGCCTCGAAATCGTCTTCTCTGTCTCTTCCGGCGACGTGGCTTTGTGCTCTGTTTGTCTTCCAATTCATGTTTTCTTGCTGG

mRNA sequence

ATGGAACATTTCAGAAGAATTTTCCATTTCTCTTGCCTCTCGATTCTTCTGATCATTGACCTCGCCGGAGCTGCGGCGGCGTCTGAAGACCACCGTCTGGTCGAGGTGGTCCCTCCGGTCAGTCTACTCTGTATCAGCGAGTGTTCAACTTGCCCTGTCATATGCTCGCCGCCGCCGCCGCCCACGGCGGCTCTCAAGTCACCTCCGCCCCACTCGCCGCCGCTGGCCTACGTCCCACTCAACGCACCCCCATCCCCGTCCCCACCTCGGCCAACCCCGTCACCGTCTCCGCCGCCGCCGCCGCCGCCGTCGCCACCGCTGGCGGCTTTATCTCATCCTCCACCGCCTCCTGCTTTCAATTACTACTTTAACTTGCCTCCACCGCCGCCGGTGCTGATTCCGGTACCTGTGCCGCCGAAGACGGCGGCGCCTCATGGAAATACGAATTCCAATGCTTATAATTACTACTTCTACGCCTCGAAATCGTCTTCTCTGTCTCTTCCGGCGACGTGGCTTTGTGCTCTGTTTGTCTTCCAATTCATGTTTTCTTGCTGG

Coding sequence (CDS)

ATGGAACATTTCAGAAGAATTTTCCATTTCTCTTGCCTCTCGATTCTTCTGATCATTGACCTCGCCGGAGCTGCGGCGGCGTCTGAAGACCACCGTCTGGTCGAGGTGGTCCCTCCGGTCAGTCTACTCTGTATCAGCGAGTGTTCAACTTGCCCTGTCATATGCTCGCCGCCGCCGCCGCCCACGGCGGCTCTCAAGTCACCTCCGCCCCACTCGCCGCCGCTGGCCTACGTCCCACTCAACGCACCCCCATCCCCGTCCCCACCTCGGCCAACCCCGTCACCGTCTCCGCCGCCGCCGCCGCCGCCGTCGCCACCGCTGGCGGCTTTATCTCATCCTCCACCGCCTCCTGCTTTCAATTACTACTTTAACTTGCCTCCACCGCCGCCGGTGCTGATTCCGGTACCTGTGCCGCCGAAGACGGCGGCGCCTCATGGAAATACGAATTCCAATGCTTATAATTACTACTTCTACGCCTCGAAATCGTCTTCTCTGTCTCTTCCGGCGACGTGGCTTTGTGCTCTGTTTGTCTTCCAATTCATGTTTTCTTGCTGG

Protein sequence

MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQFMFSCW

Homology

[Close]

BLAST of MC08g0493 vs. NCBI nr
Match: XP_022132157.1 (leucine-rich repeat extensin-like protein 3 [Momordica charantia])

HSP 1 Score: 348 bits (892), Expect = 2.25e-120
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60
           MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP
Sbjct: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60

Query: 61  PTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFN 120
           PTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFN
Sbjct: 61  PTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFN 120

Query: 121 YYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQF 180
           YYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQF
Sbjct: 121 YYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQF 180

Query: 181 MFSCW 185
           MFSCW
Sbjct: 181 MFSCW 185

[Close]

BLAST of MC08g0493 vs. NCBI nr
Match: KAA0064726.1 (classical arabinogalactan protein 9-like [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (522), Expect = 5.20e-64
Identity = 130/193 (67.36%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60
           MEHF +  HFS + ILLI+ LAGAA   ED R+V+VVPPVSLLCISECSTCP IC+PPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAAP--EDGRVVQVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP---PPPPPSPPLAALSHPPP 120
           P   LKSPPP  H PPLAY PLN+PP    PRPT SP PP   PPPPP+   A  SH PP
Sbjct: 61  PPTVLKSPPPVPHVPPLAYFPLNSPP----PRPTSSPPPPSPSPPPPPATATAVSSHSPP 120

Query: 121 PPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWL 180
           PPAF YYFNLPPPPPVLIPVPVPP  TAAP GNTNSNAYNYYFYA  SSS   SLP  + 
Sbjct: 121 PPAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF 180

Query: 181 CALFVFQFMFSCW 185
             LF+F  +   W
Sbjct: 181 WGLFLFHLILCSW 187

[Close]

BLAST of MC08g0493 vs. NCBI nr
Match: KAG6585753.1 (hypothetical protein SDJN03_18486, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (514), Expect = 6.18e-63
Identity = 124/167 (74.25%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HS 74
           ILLI+ LAGAA  S++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HS
Sbjct: 12  ILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71

Query: 75  PPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVL 134
           PP+A  PLN PPSP  PRPTPSP     PPP  P+AA SH PPPPAF YYF+LPPPPPVL
Sbjct: 72  PPMASFPLNPPPSP--PRPTPSP-----PPPPVPVAASSHSPPPPAFKYYFSLPPPPPVL 131

Query: 135 IPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ 179
           IP P+PP TAAPHGNTN  AYNYYFYAS S SL+ PA +L ALF+F 
Sbjct: 132 IPEPLPPTTAAPHGNTN--AYNYYFYASNSCSLNSPA-FLWALFLFH 168

[Close]

BLAST of MC08g0493 vs. NCBI nr
Match: XP_022951103.1 (extensin-3-like [Cucurbita moschata])

HSP 1 Score: 201 bits (511), Expect = 1.76e-62
Identity = 123/167 (73.65%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HS 74
           ILLI+ LAGAA AS++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HS
Sbjct: 12  ILLIVHLAGAAMASDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71

Query: 75  PPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVL 134
           PP+A  PLN PPSP  PRP+PSP     PPP  P+AA SH PPPPAF YYF+LPPPPPVL
Sbjct: 72  PPMASFPLNPPPSP--PRPSPSP-----PPPPVPVAASSHSPPPPAFKYYFSLPPPPPVL 131

Query: 135 IPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ 179
           IP P+PP TAAPHGNTN  AYNYYFYAS S SL+ P  +L ALF+F 
Sbjct: 132 IPEPLPPTTAAPHGNTN--AYNYYFYASNSCSLNSPV-FLWALFLFH 168

[Close]

BLAST of MC08g0493 vs. NCBI nr
Match: KAG7020664.1 (hypothetical protein SDJN02_17350, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (511), Expect = 1.76e-62
Identity = 123/167 (73.65%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HS 74
           ILLI+ LAGAA  S++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HS
Sbjct: 12  ILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71

Query: 75  PPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVL 134
           PP+A  PLN PPSP  PRPTPSP     PPP  P+AA SH PPPPA+ YYF+LPPPPPVL
Sbjct: 72  PPMASFPLNPPPSP--PRPTPSP-----PPPPVPVAASSHSPPPPAYKYYFSLPPPPPVL 131

Query: 135 IPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ 179
           IP P+PP TAAPHGNTN  AYNYYFYAS S SL+ PA +L ALF+F 
Sbjct: 132 IPEPLPPTTAAPHGNTN--AYNYYFYASNSCSLNSPA-FLWALFLFH 168

[Close]

BLAST of MC08g0493 vs. ExPASy TrEMBL
Match: A0A6J1BT26 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111005088 PE=4 SV=1)

HSP 1 Score: 348 bits (892), Expect = 1.09e-120
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60
           MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP
Sbjct: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60

Query: 61  PTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFN 120
           PTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFN
Sbjct: 61  PTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFN 120

Query: 121 YYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQF 180
           YYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQF
Sbjct: 121 YYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQF 180

Query: 181 MFSCW 185
           MFSCW
Sbjct: 181 MFSCW 185

[Close]

BLAST of MC08g0493 vs. ExPASy TrEMBL
Match: A0A5A7VEH7 (Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00300 PE=4 SV=1)

HSP 1 Score: 205 bits (522), Expect = 2.52e-64
Identity = 130/193 (67.36%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60
           MEHF +  HFS + ILLI+ LAGAA   ED R+V+VVPPVSLLCISECSTCP IC+PPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAAP--EDGRVVQVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP---PPPPPSPPLAALSHPPP 120
           P   LKSPPP  H PPLAY PLN+PP    PRPT SP PP   PPPPP+   A  SH PP
Sbjct: 61  PPTVLKSPPPVPHVPPLAYFPLNSPP----PRPTSSPPPPSPSPPPPPATATAVSSHSPP 120

Query: 121 PPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWL 180
           PPAF YYFNLPPPPPVLIPVPVPP  TAAP GNTNSNAYNYYFYA  SSS   SLP  + 
Sbjct: 121 PPAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF 180

Query: 181 CALFVFQFMFSCW 185
             LF+F  +   W
Sbjct: 181 WGLFLFHLILCSW 187

[Close]

BLAST of MC08g0493 vs. ExPASy TrEMBL
Match: A0A6J1GGS2 (extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1)

HSP 1 Score: 201 bits (511), Expect = 8.54e-63
Identity = 123/167 (73.65%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HS 74
           ILLI+ LAGAA AS++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HS
Sbjct: 12  ILLIVHLAGAAMASDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71

Query: 75  PPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVL 134
           PP+A  PLN PPSP  PRP+PSP     PPP  P+AA SH PPPPAF YYF+LPPPPPVL
Sbjct: 72  PPMASFPLNPPPSP--PRPSPSP-----PPPPVPVAASSHSPPPPAFKYYFSLPPPPPVL 131

Query: 135 IPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ 179
           IP P+PP TAAPHGNTN  AYNYYFYAS S SL+ P  +L ALF+F 
Sbjct: 132 IPEPLPPTTAAPHGNTN--AYNYYFYASNSCSLNSPV-FLWALFLFH 168

[Close]

BLAST of MC08g0493 vs. ExPASy TrEMBL
Match: A0A1S3BCX5 (classical arabinogalactan protein 9-like OS=Cucumis melo OX=3656 GN=LOC103488504 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 1.12e-61
Identity = 126/176 (71.59%), Postives = 134/176 (76.14%), Query Frame = 0


Query: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60
           MEHF +  HFS + ILLI+ LAGAA   ED R+V+VVPPVSLLCISECSTCP IC+PPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAAP--EDGRVVQVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP---PPPPPSPPLAALSHPPP 120
           P   LKSPPP  H PPLAY PLN+PP    PRPT SP PP   PPPPP+   A  SH PP
Sbjct: 61  PPTVLKSPPPVPHVPPLAYFPLNSPP----PRPTSSPPPPSPSPPPPPATATAVSSHSPP 120

Query: 121 PPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLP 168
           PPAF YYFNLPPPPPVLIPVPVPP  TAAP GNTNSNAYNYYFYA  SSS   SLP
Sbjct: 121 PPAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLP 170

[Close]

BLAST of MC08g0493 vs. ExPASy TrEMBL
Match: A0A0A0KD44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 2.06e-61
Identity = 130/195 (66.67%), Postives = 138/195 (70.77%), Query Frame = 0


Query: 1   MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPP 60
           MEHF +  HFS + ILLI+ LA A    ED R+VEVVPPVSLLCISECSTCP IC+PPPP
Sbjct: 1   MEHFSKTLHFSSILILLILRLARAVP--EDGRVVEVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PTA--ALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP---PPPPPSPPLAALSHP 120
           P     LKSPPP  H PPLAY PLN+PP    PRPT SP PP   PPPPP+   A  SH 
Sbjct: 61  PPPPIVLKSPPPVPHVPPLAYFPLNSPP----PRPTSSPPPPWPSPPPPPATATAVSSHS 120

Query: 121 PPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPAT 180
           PPPPAF YYFNLPPPPPVLIPVPVPP  TA PHGNTNSNAYNYYFYA  SSS   SLP  
Sbjct: 121 PPPPAFRYYFNLPPPPPVLIPVPVPPSATAGPHGNTNSNAYNYYFYAPASSSAPPSLPTA 180

Query: 181 WLCALFVFQFMFSCW 185
               LF+F  M   W
Sbjct: 181 LFWGLFLFHLMLCSW 189

[Close]

BLAST of MC08g0493 vs. TAIR 10
Match: AT5G11990.1 (proline-rich family protein )

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-07
Identity = 68/179 (37.99%), Postives = 88/179 (49.16%), Query Frame = 0


Query: 13  LSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHS 72
           L +++I  +     AS       V+ P   LCISECSTCP ICSPPP   +   SPPP S
Sbjct: 3   LIVIIIALVMVMVVASSPSDQTNVLTP---LCISECSTCPTICSPPPSKPSPSMSPPP-S 62

Query: 73  PPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPS---PPLAALSHPPPPPAFNYYFNLPPPP 132
           P L       P S SPP P P    PPP   S   PPL  + H PPPP F Y+ + PPPP
Sbjct: 63  PSL-------PLSSSPPPPPPHKHSPPPLSQSLSPPPLITVIH-PPPPRFYYFESTPPPP 122

Query: 133 PVL-----IPVPVPPKTAAPHGNTNSNAY------NYYFYASKSSSLSLPATWLCALFV 178
           P+       P  VP    +P G +            +YFY + +++L   +++L AL V
Sbjct: 123 PLSPDGKGSPPSVPSSPPSPKGQSQGQQQPPYPFPYFYFYTASNATLLFSSSFLIALVV 169

[Close]

BLAST of MC08g0493 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 43.1 bits (100), Expect = 2.8e-04
Identity = 51/122 (41.80%), Postives = 61/122 (50.00%), Query Frame = 0


Query: 57  PPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTP---SPSPPPPPPPSPPLAALSHP 116
           PPPPP      PPP  PP    P+ +PP PSPP P P   SP PPPPPPP PP+ +   P
Sbjct: 456 PPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYS---P 515

Query: 117 PPPPAFNYYFNLPPPPPVLIPVPV-------PPKTAAPHGNTNSNAYNYYFYASKSSSLS 169
           PPPP     ++ PPPPP   P PV       PP  + P    +      Y+Y+S     S
Sbjct: 516 PPPPV----YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHS 570

The following BLAST results are available for this feature:

BLAST of MC08g0493 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g0493 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132157.1	2.25e-120	100.00	leucine-rich repeat extensin-like protein 3 [Momordica charantia]	[more]
KAA0064726.1	5.20e-64	67.36	classical arabinogalactan protein 9-like [Cucumis melo var. makuwa]	[more]
KAG6585753.1	6.18e-63	74.25	hypothetical protein SDJN03_18486, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951103.1	1.76e-62	73.65	extensin-3-like [Cucurbita moschata]	[more]
KAG7020664.1	1.76e-62	73.65	hypothetical protein SDJN02_17350, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MC08g0493 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BT26	1.09e-120	100.00	leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5A7VEH7	2.52e-64	67.36	Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1GGS2	8.54e-63	73.65	extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1	[more]
A0A1S3BCX5	1.12e-61	71.59	classical arabinogalactan protein 9-like OS=Cucumis melo OX=3656 GN=LOC103488504...	[more]
A0A0A0KD44	2.06e-61	66.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1	[more]

BLAST of MC08g0493 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11990.1	4.6e-07	37.99	proline-rich family protein	[more]
AT4G13340.1	2.8e-04	41.80	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 63..84 score: 38.18 coord: 84..100 score: 55.29 coord: 49..61 score: 40.0 coord: 102..119 score: 35.56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g0493.1	MC08g0493.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane