MC08g0455 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0455
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTransmembrane protein
LocationMC08: 3646339 .. 3646578 (-)
RNA-Seq ExpressionMC08g0455
SyntenyMC08g0455
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAAGAGCAACAGTCAGCCCCAGGTCCCTGGATCCCTGATGCAATACCTTTCATCCTTGTTCTCATCATAGCAGCTCATGTCTTCGCTCTGGTACTCTCCAACTTCAATTTTTTTTTTTTTTTGCAATGTATTCAAACTCAACTCTTACGTTTTCTCACTTCCGCGCAATTTATGCAGGTATACTGGATTTATAGGCTAGCAACCCAAAAACAACCTCCGAGGAGGAAGGCGCAC

mRNA sequence

ATGGCGAAAGAGCAACAGTCAGCCCCAGGTCCCTGGATCCCTGATGCAATACCTTTCATCCTTGTTCTCATCATAGCAGCTCATGTCTTCGCTCTGGTATACTGGATTTATAGGCTAGCAACCCAAAAACAACCTCCGAGGAGGAAGGCGCAC

Coding sequence (CDS)

ATGGCGAAAGAGCAACAGTCAGCCCCAGGTCCCTGGATCCCTGATGCAATACCTTTCATCCTTGTTCTCATCATAGCAGCTCATGTCTTCGCTCTGGTATACTGGATTTATAGGCTAGCAACCCAAAAACAACCTCCGAGGAGGAAGGCGCAC

Protein sequence

MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH
Homology
BLAST of MC08g0455 vs. NCBI nr
Match: KAG7029467.1 (hypothetical protein SDJN02_07806 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 86.7 bits (213), Expect = 4.86e-21
Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 0

Query: 1  MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MA E++S+ GPWI +A+PFI+VL+IAAHVFALVYWIY+LA QKQPPRRKAH
Sbjct: 1  MANEKRSSTGPWILEAMPFIVVLLIAAHVFALVYWIYKLAAQKQPPRRKAH 51

BLAST of MC08g0455 vs. NCBI nr
Match: KAG7020426.1 (hypothetical protein SDJN02_17110 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.0 bits (206), Expect = 5.69e-20
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 1  MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MA EQ+S+ GPW  +AIP ++VL+IAAHVFALVYWIYRLATQKQPPR K H
Sbjct: 1  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH 51

BLAST of MC08g0455 vs. NCBI nr
Match: KAF7817318.1 (Transmembrane protein [Senna tora])

HSP 1 Score: 81.3 bits (199), Expect = 6.67e-19
Identity = 36/51 (70.59%), Postives = 45/51 (88.24%), Query Frame = 0

Query: 1  MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MAK+Q ++  PWI DA+PF++V++IAAHV ALVYWIYRLAT+KQP RRKAH
Sbjct: 1  MAKDQHTSSRPWILDAVPFLVVVLIAAHVLALVYWIYRLATEKQPQRRKAH 51

BLAST of MC08g0455 vs. NCBI nr
Match: XP_042512770.1 (uncharacterized protein LOC122087637 [Macadamia integrifolia] >XP_042512771.1 uncharacterized protein LOC122087637 [Macadamia integrifolia] >XP_042512772.1 uncharacterized protein LOC122087637 [Macadamia integrifolia])

HSP 1 Score: 80.5 bits (197), Expect = 1.35e-18
Identity = 35/51 (68.63%), Postives = 45/51 (88.24%), Query Frame = 0

Query: 1  MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MAK+QQS P PWI +A+P ++V++IAAHV +LVYWIYRLAT++QP RRKAH
Sbjct: 1  MAKDQQSIPRPWILEAVPLLVVVLIAAHVISLVYWIYRLATERQPQRRKAH 51

BLAST of MC08g0455 vs. NCBI nr
Match: PON94578.1 (Transmembrane protein [Trema orientale])

HSP 1 Score: 80.1 bits (196), Expect = 1.92e-18
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 0

Query: 1  MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MA EQ S   PW+ DA+P ++VL+IAAHVFALVYWIYRLAT+KQP RRKAH
Sbjct: 1  MANEQLSPARPWLLDAVPLMVVLLIAAHVFALVYWIYRLATEKQPQRRKAH 51

BLAST of MC08g0455 vs. ExPASy TrEMBL
Match: A0A2P5F9W8 (Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_096130 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 9.27e-19
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 0

Query: 1  MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MA EQ S   PW+ DA+P ++VL+IAAHVFALVYWIYRLAT+KQP RRKAH
Sbjct: 1  MANEQLSPARPWLLDAVPLMVVLLIAAHVFALVYWIYRLATEKQPQRRKAH 51

BLAST of MC08g0455 vs. ExPASy TrEMBL
Match: A0A7I8JMT9 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_14017526 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.92e-18
Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0

Query: 1  MAKEQQSA-PGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MAK QQ+A P PW+P++ PF++V++IAAH  ALVYWIYRL T+KQPPRRK H
Sbjct: 1  MAKGQQAADPAPWLPESFPFLVVVLIAAHALALVYWIYRLVTEKQPPRRKEH 52

BLAST of MC08g0455 vs. ExPASy TrEMBL
Match: A0A2P5DIT2 (Transmembrane protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_060110 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.38e-18
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 1  MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MA EQ S   PW+ D +P I+VL+IA HVFALVYWIYRLAT+KQP RRKAH
Sbjct: 1  MANEQLSPARPWLLDVVPLIVVLLIAVHVFALVYWIYRLATEKQPQRRKAH 51

BLAST of MC08g0455 vs. ExPASy TrEMBL
Match: A0A059CW86 (Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C04026 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.88e-17
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 0

Query: 4   EQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
            QQ+   PWI DA P+++VL+IAAHVFALVYWIYRLAT+KQP RRKAH
Sbjct: 56  NQQTPSRPWIMDAAPYLVVLLIAAHVFALVYWIYRLATEKQPQRRKAH 103

BLAST of MC08g0455 vs. ExPASy TrEMBL
Match: A0A2N9FKX1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15441 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.45e-17
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0

Query: 1  MAKEQQSAP-GPWIPDAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRKAH 51
          MA EQQS+   PW  D +P ++V++IAAHVFALVYWIYRLAT+KQP RRKAH
Sbjct: 1  MANEQQSSSLRPWFLDVVPLMVVVLIAAHVFALVYWIYRLATEKQPQRRKAH 52

BLAST of MC08g0455 vs. TAIR 10
Match: AT5G10745.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-07
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 0

Query: 1  MAKEQQSAPGPWIPDAIPFILVLIIAAHVFALVYWIYRLATQK--QPPRRKAH 52
          MAKEQ     PW  D +P ++VL+ AAHV AL YWIYRLAT +  Q  R K H
Sbjct: 1  MAKEQHLR--PWFLDLVPALVVLLAAAHVIALGYWIYRLATDRRAQSQRGKFH 51

BLAST of MC08g0455 vs. TAIR 10
Match: AT5G24980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10745.1); Has 32 Blast hits to 32 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 2.0e-05
Identity = 19/35 (54.29%), Postives = 26/35 (74.29%), Query Frame = 0

Query: 15 DAIPFILVLIIAAHVFALVYWIYRLATQKQPPRRK 50
          D +P ++V + A HV ALVYWIYRLA+ + P R+K
Sbjct: 6  DLVPAMVVFLAAVHVIALVYWIYRLASDRPPQRKK 40

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7029467.14.86e-2176.47hypothetical protein SDJN02_07806 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG7020426.15.69e-2074.51hypothetical protein SDJN02_17110 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAF7817318.16.67e-1970.59Transmembrane protein [Senna tora][more]
XP_042512770.11.35e-1868.63uncharacterized protein LOC122087637 [Macadamia integrifolia] >XP_042512771.1 un... [more]
PON94578.11.92e-1872.55Transmembrane protein [Trema orientale][more]
Match NameE-valueIdentityDescription
A0A2P5F9W89.27e-1972.55Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_096130 PE=4 SV=1[more]
A0A7I8JMT91.92e-1867.31Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_14017526 PE=4 SV... [more]
A0A2P5DIT25.38e-1870.59Transmembrane protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_060110 PE=4... [more]
A0A059CW865.88e-1772.92Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C04... [more]
A0A2N9FKX16.45e-1769.23Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15441 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G10745.11.7e-0754.72unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G24980.12.0e-0554.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35755PROTEIN, PUTATIVE-RELATEDcoord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0455.1MC08g0455.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane