MC08g0103 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g0103
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	nuclear transcription factor Y subunit C-1
Location	MC08: 644916 .. 645335 (-)
RNA-Seq Expression	MC08g0103
Synteny	MC08g0103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAAGAAGAGTCCGGGGAGGCTATCCGTCCCGAAATTCCGACCGGACGAGTCAAGAAGATAATGAAGGTGGACAAGGACGTATGCAAAGTGAACTCTGAAGCACTATTTCTTGTCTCATGCGCCACCGATCTCTTCCTGAAGCTTCTCGCTGAAAAGTCTGCAGAAGTCGCCACGGAGAAGAAACGGAAGACAGTTAAGCTTGAACACATCCGAATCGCCGTCAAAAGGCATCGACCGATCAGTGATTTTCTCCTCGATTCGCTACCTCTTCCACCTCAGCCGTCGGATGCTCCGGCGAAGAACGAGAATCGCACCCGCACTGCCGCCGACAAAGCAGCTCCCGAGGGAACCCGTCGAATCGACGATTTCTTTCGCAAGCCAGCGAAGACAACGTCGGATGAGAACAACGAGTCG

mRNA sequence

ATGGCCGAAGAAGAGTCCGGGGAGGCTATCCGTCCCGAAATTCCGACCGGACGAGTCAAGAAGATAATGAAGGTGGACAAGGACGTATGCAAAGTGAACTCTGAAGCACTATTTCTTGTCTCATGCGCCACCGATCTCTTCCTGAAGCTTCTCGCTGAAAAGTCTGCAGAAGTCGCCACGGAGAAGAAACGGAAGACAGTTAAGCTTGAACACATCCGAATCGCCGTCAAAAGGCATCGACCGATCAGTGATTTTCTCCTCGATTCGCTACCTCTTCCACCTCAGCCGTCGGATGCTCCGGCGAAGAACGAGAATCGCACCCGCACTGCCGCCGACAAAGCAGCTCCCGAGGGAACCCGTCGAATCGACGATTTCTTTCGCAAGCCAGCGAAGACAACGTCGGATGAGAACAACGAGTCG

Coding sequence (CDS)

ATGGCCGAAGAAGAGTCCGGGGAGGCTATCCGTCCCGAAATTCCGACCGGACGAGTCAAGAAGATAATGAAGGTGGACAAGGACGTATGCAAAGTGAACTCTGAAGCACTATTTCTTGTCTCATGCGCCACCGATCTCTTCCTGAAGCTTCTCGCTGAAAAGTCTGCAGAAGTCGCCACGGAGAAGAAACGGAAGACAGTTAAGCTTGAACACATCCGAATCGCCGTCAAAAGGCATCGACCGATCAGTGATTTTCTCCTCGATTCGCTACCTCTTCCACCTCAGCCGTCGGATGCTCCGGCGAAGAACGAGAATCGCACCCGCACTGCCGCCGACAAAGCAGCTCCCGAGGGAACCCGTCGAATCGACGATTTCTTTCGCAAGCCAGCGAAGACAACGTCGGATGAGAACAACGAGTCG

Protein sequence

MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

Homology

[Close]

BLAST of MC08g0103 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.3e-06
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 13  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHI 72
           ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I
Sbjct: 65  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124

Query: 73  RIAVKRHRPISDFLLDSLP 92
             A+ R   I DFL+D +P
Sbjct: 125 AAAITR-TDIFDFLVDIVP 142

[Close]

BLAST of MC08g0103 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.3e-06
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 13  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHI 72
           ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I
Sbjct: 78  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137

Query: 73  RIAVKRHRPISDFLLDSLP 92
             A+ R   I DFL+D +P
Sbjct: 138 AAAITR-TDIFDFLVDIVP 155

[Close]

BLAST of MC08g0103 vs. ExPASy Swiss-Prot
Match: A6BLW4 (Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC2 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.9e-05
Identity = 30/79 (37.97%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 13  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHI 72
           ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   +
Sbjct: 69  QLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRNDV 128

Query: 73  RIAVKRHRPISDFLLDSLP 92
             A+ R   + DFL+D +P
Sbjct: 129 AAAIAR-TDVFDFLVDIVP 146

[Close]

BLAST of MC08g0103 vs. ExPASy Swiss-Prot
Match: Q9W256 (DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.4e-05
Identity = 23/69 (33.33%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 8   EAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTV 67
           EA   ++P  R++ IMK+D D+   N+EA+F+V+ A +LF+  L+ +S     + K+KT+
Sbjct: 72  EAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTI 131

Query: 68  KLEHIRIAV 77
           +   + +A+
Sbjct: 132 QKRDVDMAI 140

[Close]

BLAST of MC08g0103 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.1e-05
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 14  IPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIR 73
           +P  R+KKIMK D+DV  +++EA  + + A ++F+  L  +S     E KR+T++   I 
Sbjct: 71  LPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIA 130

Query: 74  IAVKRHRPISDFLLDSLP 92
            AV R   I DFL+D +P
Sbjct: 131 AAVTR-TDIFDFLVDIVP 147

[Close]

BLAST of MC08g0103 vs. NCBI nr
Match: XP_022132171.1 (nuclear transcription factor Y subunit C-1 [Momordica charantia])

HSP 1 Score: 266 bits (681), Expect = 1.13e-89
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT
Sbjct: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFRKPAKTTSDENNES
Sbjct: 121 RIDDFFRKPAKTTSDENNES 140

[Close]

BLAST of MC08g0103 vs. NCBI nr
Match: XP_038884228.1 (NCT transcriptional regulatory complex subunit A [Benincasa hispida])

HSP 1 Score: 238 bits (608), Expect = 1.53e-78
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           MAEEESG+AIRPE PTGRVKKIMK+DKD+ KVNSEALFLVSCAT+LFLKLLAEKSAEVA 
Sbjct: 1   MAEEESGDAIRPEFPTGRVKKIMKLDKDIEKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIRIAVKRHR ISDFLLDSLPLPPQPSDAPAK+ENRTRT  DK  PEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPPQPSDAPAKDENRTRTVVDKVVPEGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFR+PAKTTS ENNES
Sbjct: 121 RIDDFFRRPAKTTSAENNES 140

[Close]

BLAST of MC08g0103 vs. NCBI nr
Match: KAA0064731.1 (dr1-associated corepressor [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (571), Expect = 6.68e-73
Identity = 118/140 (84.29%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           M EEESGEAIRPE PTGRVKKIMK+DKD+ KVNSEALF+VSCAT+LFLKLLAEKSAEVA 
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIR+AVKRHR ISDFLLDSLPLP QPSDAPAK+ENR R   DK AP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFR+P KTTS E NES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of MC08g0103 vs. NCBI nr
Match: XP_008445504.1 (PREDICTED: dr1-associated corepressor [Cucumis melo])

HSP 1 Score: 222 bits (565), Expect = 5.49e-72
Identity = 118/140 (84.29%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           M EEESGEAIRPE PTGRVKKIMK+DKD+ KVNSEALFLVSCAT+LFLKLLAEKSAEVA 
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIR+AVKRHR ISDFLLDSLPLP QPSDA AK+ENR R   DK AP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFR+P KTTS E NES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of MC08g0103 vs. NCBI nr
Match: XP_022997291.1 (DNA polymerase epsilon subunit C [Cucurbita maxima])

HSP 1 Score: 221 bits (564), Expect = 7.79e-72
Identity = 116/140 (82.86%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           MAEEE GEAIRPE P GR+KKIMK+DKD+ KVNSEALFLVSCAT+LFL+LLAEKSAEVA 
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIRIAVKRH+ ISDFLLDSLPLP QPSDAPAK+ENRTR   DK APEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFR+P KT S E NE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of MC08g0103 vs. ExPASy TrEMBL
Match: A0A6J1BRI3 (nuclear transcription factor Y subunit C-1 OS=Momordica charantia OX=3673 GN=LOC111005093 PE=4 SV=1)

HSP 1 Score: 266 bits (681), Expect = 5.48e-90
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT
Sbjct: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFRKPAKTTSDENNES
Sbjct: 121 RIDDFFRKPAKTTSDENNES 140

[Close]

BLAST of MC08g0103 vs. ExPASy TrEMBL
Match: A0A5A7VG98 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00350 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 3.24e-73
Identity = 118/140 (84.29%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           M EEESGEAIRPE PTGRVKKIMK+DKD+ KVNSEALF+VSCAT+LFLKLLAEKSAEVA 
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIR+AVKRHR ISDFLLDSLPLP QPSDAPAK+ENR R   DK AP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFR+P KTTS E NES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of MC08g0103 vs. ExPASy TrEMBL
Match: A0A1S3BDL4 (dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 2.66e-72
Identity = 118/140 (84.29%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           M EEESGEAIRPE PTGRVKKIMK+DKD+ KVNSEALFLVSCAT+LFLKLLAEKSAEVA 
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIR+AVKRHR ISDFLLDSLPLP QPSDA AK+ENR R   DK AP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFR+P KTTS E NES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of MC08g0103 vs. ExPASy TrEMBL
Match: A0A6J1K737 (DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=4 SV=1)

HSP 1 Score: 221 bits (564), Expect = 3.77e-72
Identity = 116/140 (82.86%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           MAEEE GEAIRPE P GR+KKIMK+DKD+ KVNSEALFLVSCAT+LFL+LLAEKSAEVA 
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIRIAVKRH+ ISDFLLDSLPLP QPSDAPAK+ENRTR   DK APEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFR+P KT S E NE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of MC08g0103 vs. ExPASy TrEMBL
Match: A0A6J1HCT3 (DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 PE=4 SV=1)

HSP 1 Score: 219 bits (557), Expect = 4.40e-71
Identity = 114/140 (81.43%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60
           MAEEE GEAIRPE P GR+KKIMK+DKD+ KVNSEALFLVSCAT+LFL+LLAEKS+EVA 
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120
           EKKRKTVKLEHIRIAVKRH+ I DFLLDSLPLP QPSDAPAK+ENRTR   DK APEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSIGDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRKPAKTTSDENNES 140
           RIDDFFR+P KT S E NE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of MC08g0103 vs. TAIR 10
Match: AT5G43250.1 (nuclear factor Y, subunit C13 )

HSP 1 Score: 145.2 bits (365), Expect = 3.9e-35
Identity = 86/136 (63.24%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 3   EEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEK 62
           EEE G +IRPE P GRVKKIMK+DKD+ K+NSEAL +++ +T+LFL  LAEKSA V  EK
Sbjct: 2   EEEEG-SIRPEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEK 61

Query: 63  KRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADK---AAPEGT 122
           KRKTV L+H+RIAVKRH+P SDFLLDSLPLP QP          T++ +DK   A P GT
Sbjct: 62  KRKTVNLDHLRIAVKRHQPTSDFLLDSLPLPAQP-------VKHTKSVSDKKIPAPPIGT 121

Query: 123 RRIDDFFRK-PAKTTS 135
           RRIDDFF K  AKT S
Sbjct: 122 RRIDDFFSKGKAKTDS 129

[Close]

BLAST of MC08g0103 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 )

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 13  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHI 72
           ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I
Sbjct: 65  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124

Query: 73  RIAVKRHRPISDFLLDSLP 92
             A+ R   I DFL+D +P
Sbjct: 125 AAAITR-TDIFDFLVDIVP 142

[Close]

BLAST of MC08g0103 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 )

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 13  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHI 72
           ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I
Sbjct: 78  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137

Query: 73  RIAVKRHRPISDFLLDSLP 92
             A+ R   I DFL+D +P
Sbjct: 138 AAAITR-TDIFDFLVDIVP 155

[Close]

BLAST of MC08g0103 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 )

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 13  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHI 72
           ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I
Sbjct: 78  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137

Query: 73  RIAVKRHRPISDFLLDSLP 92
             A+ R   I DFL+D +P
Sbjct: 138 AAAITR-TDIFDFLVDIVP 155

[Close]

BLAST of MC08g0103 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 48.5 bits (114), Expect = 5.0e-06
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 14  IPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIR 73
           +P  R+KKIMK D+DV  +++EA  + + A ++F+  L  +S     E KR+T++   I 
Sbjct: 81  LPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIA 140

Query: 74  IAVKRHRPISDFLLDSLP 92
            AV R   I DFL+D +P
Sbjct: 141 AAVTR-TDIFDFLVDIVP 157

The following BLAST results are available for this feature:

BLAST of MC08g0103 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMP0	8.3e-06	40.51	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FMV5	8.3e-06	40.51	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
A6BLW4	1.9e-05	37.97	Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9W256	5.4e-05	33.33	DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2...	[more]
Q9ZVL3	7.1e-05	38.46	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of MC08g0103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132171.1	1.13e-89	100.00	nuclear transcription factor Y subunit C-1 [Momordica charantia]	[more]
XP_038884228.1	1.53e-78	89.29	NCT transcriptional regulatory complex subunit A [Benincasa hispida]	[more]
KAA0064731.1	6.68e-73	84.29	dr1-associated corepressor [Cucumis melo var. makuwa]	[more]
XP_008445504.1	5.49e-72	84.29	PREDICTED: dr1-associated corepressor [Cucumis melo]	[more]
XP_022997291.1	7.79e-72	82.86	DNA polymerase epsilon subunit C [Cucurbita maxima]	[more]

BLAST of MC08g0103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRI3	5.48e-90	100.00	nuclear transcription factor Y subunit C-1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7VG98	3.24e-73	84.29	Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BDL4	2.66e-72	84.29	dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1	[more]
A0A6J1K737	3.77e-72	82.86	DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=...	[more]
A0A6J1HCT3	4.40e-71	81.43	DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 P...	[more]

BLAST of MC08g0103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43250.1	3.9e-35	63.24	nuclear factor Y, subunit C13	[more]
AT3G48590.1	5.9e-07	40.51	nuclear factor Y, subunit C1	[more]
AT5G63470.1	5.9e-07	40.51	nuclear factor Y, subunit C4	[more]
AT5G63470.2	5.9e-07	40.51	nuclear factor Y, subunit C4	[more]
AT1G08970.4	5.0e-06	38.46	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 13..76 e-value: 6.9E-18 score: 64.7
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..91 e-value: 5.7E-21 score: 76.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 13..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..140
None	No IPR available	PANTHER	PTHR10252:SF95	NUCLEAR FACTOR Y, SUBUNIT C13	coord: 2..129
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 2..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g0103.1	MC08g0103.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity