MC08g0099 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0099
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 620513 .. 620602 (+)
RNA-Seq ExpressionMC08g0099
SyntenyMC08g0099
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAGCTCTCAAGCCTGGCAAAGGCGAAAGCTCTTGGACGGCAACTGCGAATGTTTTGAGAAACGAGCCTTTAGAGATGTCATCATTAAC

mRNA sequence

ATTAGCTCTCAAGCCTGGCAAAGGCGAAAGCTCTTGGACGGCAACTGCGAATGTTTTGAGAAACGAGCCTTTAGAGATGTCATCATTAAC

Coding sequence (CDS)

ATTAGCTCTCAAGCCTGGCAAAGGCGAAAGCTCTTGGACGGCAACTGCGAATGTTTTGAGAAACGAGCCTTTAGAGATGTCATCATTAAC

Protein sequence

ISSQAWQRRKLLDGNCECFEKRAFRDVIIN
Homology
BLAST of MC08g0099 vs. NCBI nr
Match: KAG5041669.1 (hypothetical protein JHK85_014145 [Glycine max])

HSP 1 Score: 49.3 bits (116), Expect = 2.09e-06
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1  ISSQAWQRRKLLDGNCECFEKRAFRDVIIN 30
          ISSQAW+RRKLL G+CEC EK+AF  VII+
Sbjct: 45 ISSQAWRRRKLLGGHCECLEKQAFVIVIID 74

BLAST of MC08g0099 vs. NCBI nr
Match: CBI21545.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 49.3 bits (116), Expect = 2.39e-06
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0

Query: 2  SSQAWQRRKLLDGNCECFEKRAFRDVIIN 30
          +SQAWQRRKLL G CECFEK+AF  VII+
Sbjct: 20 NSQAWQRRKLLGGYCECFEKQAFGVVIID 48

BLAST of MC08g0099 vs. NCBI nr
Match: XP_007163925.1 (hypothetical protein PHAVU_L004900g, partial [Phaseolus vulgaris] >ESW35919.1 hypothetical protein PHAVU_L004900g, partial [Phaseolus vulgaris])

HSP 1 Score: 48.5 bits (114), Expect = 9.57e-06
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 0

Query: 1  ISSQAWQRRKLLDGNCECFEKRAF 24
          ISSQAW+RRKLL GNCEC EK+AF
Sbjct: 47 ISSQAWRRRKLLGGNCECLEKQAF 70

BLAST of MC08g0099 vs. NCBI nr
Match: KAG5155801.1 (hypothetical protein JHK82_013770 [Glycine max])

HSP 1 Score: 47.4 bits (111), Expect = 9.59e-06
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 0

Query: 2  SSQAWQRRKLLDGNCECFEKRAFRDVIIN 30
          SSQAW+RRKLL G+CEC EK+AF  VII+
Sbjct: 36 SSQAWRRRKLLGGHCECLEKQAFVIVIID 64

BLAST of MC08g0099 vs. NCBI nr
Match: KAF8109572.1 (hypothetical protein N665_0094s0039, partial [Sinapis alba])

HSP 1 Score: 47.8 bits (112), Expect = 1.51e-05
Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 0

Query: 1  ISSQAWQRRKLLDGNCECFEKRAFRDVIIN 30
          ISSQAW++ K L G+CECFEK+A R ++IN
Sbjct: 29 ISSQAWRKAKALGGHCECFEKQALRFILIN 58

BLAST of MC08g0099 vs. ExPASy TrEMBL
Match: A0A5K1BHC7 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS14649 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.75e-08
Identity = 23/29 (79.31%), Postives = 27/29 (93.10%), Query Frame = 0

Query: 2  SSQAWQRRKLLDGNCECFEKRAFRDVIIN 30
          SSQAW+RRKLLDG+CECFEK+AF  VII+
Sbjct: 31 SSQAWRRRKLLDGHCECFEKQAFGVVIID 59

BLAST of MC08g0099 vs. ExPASy TrEMBL
Match: V7D0L6 (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris OX=3885 GN=PHAVU_L004900g PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.63e-06
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 0

Query: 1  ISSQAWQRRKLLDGNCECFEKRAF 24
          ISSQAW+RRKLL GNCEC EK+AF
Sbjct: 47 ISSQAWRRRKLLGGNCECLEKQAF 70

BLAST of MC08g0099 vs. ExPASy TrEMBL
Match: A0A6N2KF19 (Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS72789 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.70e-06
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0

Query: 1   ISSQAWQRRKLLDGNCECFEKRAFRDVIIN 30
           I SQAW+RRK L G+CECFEK+AF  +IIN
Sbjct: 94  ICSQAWRRRKHLGGHCECFEKQAFGFIIIN 123

BLAST of MC08g0099 vs. ExPASy TrEMBL
Match: A0A6N2KE21 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS72787 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.12e-05
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 0

Query: 1  ISSQAWQRRKLLDGNCECFEKRAFRDVIIN 30
          I SQAW+RRK LDG+CECFEK+A   +II+
Sbjct: 46 IRSQAWRRRKHLDGHCECFEKQALGFIIID 75

BLAST of MC08g0099 vs. ExPASy TrEMBL
Match: A0A2K2A5I7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G209300 PE=4 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.51e-05
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 0

Query: 1  ISSQAWQRRKLLDGNCECFEKRAFRDVIIN 30
          + +QAW+RRK L G+CECFEK+AF  +II+
Sbjct: 1  MRTQAWRRRKHLGGHCECFEKQAFEFIIID 30

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG5041669.12.09e-0673.33hypothetical protein JHK85_014145 [Glycine max][more]
CBI21545.32.39e-0675.86unnamed protein product, partial [Vitis vinifera][more]
XP_007163925.19.57e-0683.33hypothetical protein PHAVU_L004900g, partial [Phaseolus vulgaris] >ESW35919.1 hy... [more]
KAG5155801.19.59e-0672.41hypothetical protein JHK82_013770 [Glycine max][more]
KAF8109572.11.51e-0563.33hypothetical protein N665_0094s0039, partial [Sinapis alba][more]
Match NameE-valueIdentityDescription
A0A5K1BHC73.75e-0879.31Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS14... [more]
V7D0L64.63e-0683.33Uncharacterized protein (Fragment) OS=Phaseolus vulgaris OX=3885 GN=PHAVU_L00490... [more]
A0A6N2KF194.70e-0670.00Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS7278... [more]
A0A6N2KE211.12e-0566.67Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS72787 PE=4 SV=1[more]
A0A2K2A5I74.51e-0560.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G209300 PE=4 ... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0099.1MC08g0099.1mRNA