MC08g0090 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0090
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 557567 .. 557677 (+)
RNA-Seq ExpressionMC08g0090
SyntenyMC08g0090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCAACCAAAATTTACCAAACCCTAATTCCGAAAACTGGTTCGATTTTGAACAACTTGATCTCAAGGTTAAATCTGTGGAATTGAACACCGTTTTTCCGCCGTTTTGCTTC

mRNA sequence

TCCAACCAAAATTTACCAAACCCTAATTCCGAAAACTGGTTCGATTTTGAACAACTTGATCTCAAGGTTAAATCTGTGGAATTGAACACCGTTTTTCCGCCGTTTTGCTTC

Coding sequence (CDS)

TCCAACCAAAATTTACCAAACCCTAATTCCGAAAACTGGTTCGATTTTGAACAACTTGATCTCAAGGTTAAATCTGTGGAATTGAACACCGTTTTTCCGCCGTTTTGCTTC

Protein sequence

SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCF
Homology
[Close]
BLAST of MC08g0090 vs. NCBI nr
Match: XP_022147296.1 (probable WRKY transcription factor 46 isoform X2 [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.02e-10
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1   SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCF 37
           +NQNLP+PNS+ WFDFE  DLKVKS +L+TVFPPFCF
Sbjct: 195 TNQNLPSPNSQIWFDFEHHDLKVKSEDLDTVFPPFCF 231

[Close]
BLAST of MC08g0090 vs. NCBI nr
Match: XP_022147294.1 (probable WRKY transcription factor 46 isoform X1 [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.03e-10
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1   SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCF 37
           +NQNLP+PNS+ WFDFE  DLKVKS +L+TVFPPFCF
Sbjct: 195 TNQNLPSPNSQIWFDFEHHDLKVKSEDLDTVFPPFCF 231

[Close]
BLAST of MC08g0090 vs. ExPASy TrEMBL
Match: A0A6J1D1X8 (probable WRKY transcription factor 46 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016283 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.96e-11
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1   SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCF 37
           +NQNLP+PNS+ WFDFE  DLKVKS +L+TVFPPFCF
Sbjct: 195 TNQNLPSPNSQIWFDFEHHDLKVKSEDLDTVFPPFCF 231

[Close]
BLAST of MC08g0090 vs. ExPASy TrEMBL
Match: A0A6J1D0K8 (probable WRKY transcription factor 46 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016283 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.01e-11
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1   SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCF 37
           +NQNLP+PNS+ WFDFE  DLKVKS +L+TVFPPFCF
Sbjct: 195 TNQNLPSPNSQIWFDFEHHDLKVKSEDLDTVFPPFCF 231

The following BLAST results are available for this feature:
BLAST of MC08g0090 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g0090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147296.11.02e-1075.68probable WRKY transcription factor 46 isoform X2 [Momordica charantia][more]
XP_022147294.11.03e-1075.68probable WRKY transcription factor 46 isoform X1 [Momordica charantia][more]
BLAST of MC08g0090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D1X84.96e-1175.68probable WRKY transcription factor 46 isoform X2 OS=Momordica charantia OX=3673 ... [more]
A0A6J1D0K85.01e-1175.68probable WRKY transcription factor 46 isoform X1 OS=Momordica charantia OX=3673 ... [more]
BLAST of MC08g0090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0090.1MC08g0090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding