MC08g0023 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g0023
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA-binding protein 48
LocationMC08: 160623 .. 165547 (+)
RNA-Seq ExpressionMC08g0023
SyntenyMC08g0023
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
AACACAAACCTAACCAATAAACCTTCCGTCTTCATTTTTTAATGCTATGCAAGCAAAATTACTATAAAATTTAAATACTTTAAAACTGCCCCAATTTACGTTTTTCCTTCGCAACTGCAGTATATATAGTCAAAGAAAAAAAATTCAATTTCTTTTATAAGAGTGCAGAAATGAATCTGTATTGGAATTTGTGCGTGCCTAAACCTAAAAGGTGGAAAATCGGAGTCAGAAAATTGGAATTTGTAGACGACAACTTGTACGGGGATGCCTCGCTACACAAATGAGCCCCCTGCGGTTCGCGTCTATGCGATTTGCGACGAGTCAAGGTTATGCTCCGCCTCTGTTATTTCTCCTCTGCAGAATCGAAGATCTATGACTTGCTCATATTTACTTGTTCTTTGTGAAATCCAACAGGTATTTGATTGTGAGGAATGTTCCGGCATTGGGTTGCGGAGATGACTTGCTCAAATTGTTTTCCTCCTACGGAAACGTTGAAGAGTATGACTTTCATTTTTTGTTTTCTTTTAGACTCGTCTTTACATGCTTTTTCTTTAGCCTGCTATGTTAATTTGCCTCAGTAGCCACATGTATTGCCATTTCATGTTGAAAGCCTTTGTTAATTGTTATACCGTCCGTTGCAAAATTTTCCAACTCATGAGAAATTTTCTATAGTTCTTTCTTTTCTTTTTGGAAGGGGCCTCTGGAGCCATCCGGCAATGGCATAAATAGTTCTTTACCCGGTCACGGCATATAATTGTTTCATGTTTTCCCTGTTGGATTAGCTTCTAATAATTTCATTTCCCTCTCTAGATTGGAAAAATCTATAACAGCTCGTATGCCTCATATTTTCCTTTTATCTTATTTGATACTCTGTCAGGTGTAAACCAATGGATGCAGAAGAATGTGATGAATTTACGGATGTTTATTTTATCAAATTTCACTTGGTTAACAATGCCAGGTTAGTTGGTTATCTTTTGATTAAAAGCATGCGCTAGAGTCCCCCGACCCCCCCGGGACAAAAATTTCTTAATCATGTATGCTCTTTATTCAACTGTAAAAGAATTGAACTATAATGATTTCATTTTTAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTCGATACAAAAGAAAAGCTAGAAGTCAGGAGACGAGAAGTTTTAGCACGATTGAATCGTAAGTTTTTGTGTGTGTGAAATGTAGCTTTGGCCTTTTTTATGCATATAATAGGGAGATATTGTTTTGAGTACATGTGGAAGGCATTAATTTAAAAATCCAAGAAATGAACATTATAATAGGGAAATGGTGTTTCCTTCTAATTAGTTCACTTTTAAGCATGTTATAATTTTGATATCAGTTGGAAGATCAAAGGGATCCTCAGTCAGATCAACTGCCACAGATCTTTCAAATCCTTCACACTCTCATTATGCCCTTGAACAGAAGTACTCTCTTGAAAAGAGGTATAAACAAATGAAAATTTGCAGTTTCTTCAAACTCACAAAATTGTTTTAACTGTCCTTTTCTTGGTAGGAATTATGGAGATGCAGCACTCATTTCCAACCCACGTGTTTCTCAAATGACAAAAGTATCCTCCGACCAGGTTTGTTATTATAGTTGTCTTCCCTCCCTTCTCATGTCATCTTTTATGTTATAGTTGTTATTAACAATGCTAGGGGACAATTATTATTCATGTGTTCTTTTAGTTCATGTTTTCTCTTTTACATGATGAAATTTGAACATAGTTTCAATACTTGTGCTGCAATATGGGTATGAGGAGTTCAATCCAACTGGCTCCATGATCACTTTGGAAGGCTCATGCAAGTGTGATAGGCACAAAATTAGGAAGTCTAGAGTGTTTCTCCTTTATTTTTTATTGGGCACAAAAATTTCCAGGCATTTGGGAAAGTCTAGACTCTCCCAACCATCTCCAGATTTTTCCTTTGGCTTTTGCAGTAATAGCAAACTTGGCCATTTTTACAAAATATTAGTGGTATATCTATATCAATGATGTACTTTATATTAGGTATATCAATGATATACTTTGTCCATGATGCAAAAATAGTATATCAGTCATATACTTTATATTGGTACATCACTAATCGACTTTATCAAGGATACAAAAATGGTATATCGATTGTTCTAAAGAAATAAAAAATGGTATATCAATAATATATTGTATATTGATATATTTTATCAATTGTAGAAAAATGGTAGTATATAAGTTATATAGAAGAATTATCATATTGAAAAATGATTTTTAAGTGTGACATATTTGCAAATGTAGAAACTAGTTTTACCACCTATTATAATTTCCCTTCTTCCTTTCTTTCCCCGTTCAATCCTTGCCCTTTTACTGCTTCAGCCAAATTAGTTAGATAACTACCCATAGTTATTTGATATCAACTTAGTCATGCCAGTGGGCTAACAATACTAACTATCGACTCTATGACCTGCCTTGTCTGGCATGAGTAATAGGTATATAGGTGACTGTACGATGAGGTGTGCTCTAAATTTCTGTGTTTTTATCACTCCATTTTGGTATTCAAGAATTCAACTAGTACATTAATAGAAATAGACACAATATAGTTGCCACCAATTCTTCGATAGCAACGTCTTCAATTGTTGGTGCTTCGAGATTCTCATCAATGCATAGTTCTATGAGTTGGAAGAATCTTTACTTCAAATATCTGTTTTGTATTTTGGGTCAAATTTGTATGACCAAAATATTTAAAGCAAATGGCATCATTTTTCTCTTGCCAAGAATCACCGAACCACTTGGAATTGCCTCATAAATTACCCAAGCATCAATATTCAAATCAAATTTCATACTCTAGATTCTTCCTCAAATTCATTGTTGGAGATATTTCCATCAATTTCGATTACCTCTTCAAAACTATCTCTAAAATAATTTTCAATTTCTTCAAATTCAATCAAGTGTGCAATGAATCACATTACAATATGTTCAAGAGGGCAGATGCCCCTACCTTTTTTCCCCCTTTGGAAATGGGATTTTGGTGATCTCAGGCAAAGAGGGGTGGAAAGAGGTCCAACTACACCTTGGAGAAATGAGCATGATGCATTGGAGACTTTCCATCGAATTTGGATTTGAAGATTCGAAGGTAGTGGGATTTAGTGTCAGCACTCACTGATTTTTATACCCGTGTATATGAAGCAATAGCTTCTTGGTGGTGGATCCATGATGAAGATGACGTGGTTTGGAAACATAATTGGTATTAAGCCGGTTGGTGGAAACTGGGGGTAGGGGCCTTGGTTTTATCTAGATGAAGCAAGAGCCTCTTGGTGGATCAATTGTGGAACGTTGAAGTGTATAATGTTTGAGGATGTGGTTTTGCATCCGAGTGTGGAGGTAATAATTTTCTGAATCCAGACTGGTCTTGATGATGTGGTGAAGAAGATGAGTATGGAGGTGATGGAAAAAATACTTCATTAGTCTGTGAATCTAACAAATTGTGCTCACTCCACCTCCAGTATCTAAACTCCAACCATCATTTATGGCCATCCTACCTTTTAGGAACAGCCAAGTGTTCTGATTCCAAACTAATGCAATGAGTTTTCGTGATTAAGTCAAATCCATGACAAAAAAGGGAAAACTCCCAAAATGAGAGAAACTCTCTATACTCTAAATTCTTTAATTTTGAAAAATTTTCTAAGACAATCCAACTGTGGGCTATTTAACCTTACAAGAAAATGAAAATAACTAAAAATCCTGAAAGATTAATTGTCTAATAAATTTAAGTTAACTTACTCAGATTGACAATTTAGTTAATAAAAAAATAACTAATTAACTATATCAAAATAAGCTATTAGGCTAGTTATATAATTGCTTGCTTCCTACACCACTCCCCACTTTCTTATAGTAGTTGATTGCCATTGTAGACTTCTAGGGTCTACAAATAATGTGTTGCTCTCATTATGGTCCTGCTCTAATTATTTGAAAGGTAATTTTGTTTCATCACATAGATGATTTTTAAGTTGCCTTCTCCATTCAAGGAGTGCAAACTCACGGTTTACCGAATTGCCTTTTTTCCCCCTTGACATTTTCTTATGAAATCTTAAAATAAAATCATGGTCTTGTTAAAACTAGGAATGTTTTTCTAAAGGACCTGTTGGTGGCATGGTTAGTCGTTGATGCCACTAGGGGTTGGGTCTAGGGTAGGAAGGTTTAGGTATCATCCTTGATAATCGTCTTGAATCTTCCGTTTCTGGGTGAAGATATGGATTGAACATTTGTTGACGTTTACTTCTTTGTTTATTTTTATTTCTGTTATCGTCCTTGTTGGGTAGCCTGTTGTAGATTTTCTTTTGGCTAAAAATGTGACTTTTTTCTCGGAGTGTACAGGATTACTTCGCATCTGAATCTATGAATCAAACTGTACATCTCGTCAGGGAAAAGCTTGATCAGGTGATAGAATTCCTTTGTGTTATGGTTTATTTTCAACATGTGAGAAAACTGTAATATAAACATTGCTTATTATTTGTGTTTTAGATTCAATCAAGCAGTGAACATCTGCAAGCTGGACCCGTGAGCAAGAAGTCACGTGTGGACAACAGAAGGAGAATATAATGCTTACCGGCCTTTATAGAGAATGGCCAGCGGGGGTGTCTACATTGTATCAAAAGCTATTTTGACACATCACATATATGTTTATAGTGTAAATATTTAACAATTCATCTTTATTTACAAAGGTAATAATGGAGTAGAGCATACACCAAAGTTCTGTATGAGGAGCTTTATTTTCTTTTCCCCCTATATTGGGGATCATGATAGTTAAAAAGCATTTTCCATTCATCTCTTTGATGCATATAGAAACCATGAAAGTATCAATCAGTCATGCCAATTGCCACGGCCCAC

mRNA sequence

AACACAAACCTAACCAATAAACCTTCCGTCTTCATTTTTTAATGCTATGCAAGCAAAATTACTATAAAATTTAAATACTTTAAAACTGCCCCAATTTACGTTTTTCCTTCGCAACTGCAGTATATATAGTCAAAGAAAAAAAATTCAATTTCTTTTATAAGAGTGCAGAAATGAATCTGTATTGGAATTTGTGCGTGCCTAAACCTAAAAGGTGGAAAATCGGAGTCAGAAAATTGGAATTTGTAGACGACAACTTGTACGGGGATGCCTCGCTACACAAATGAGCCCCCTGCGGTTCGCGTCTATGCGATTTGCGACGAGTCAAGGTATTTGATTGTGAGGAATGTTCCGGCATTGGGTTGCGGAGATGACTTGCTCAAATTGTTTTCCTCCTACGGAAACGTTGAAGAGTGTAAACCAATGGATGCAGAAGAATGTGATGAATTTACGGATGTTTATTTTATCAAATTTCACTTGGTTAACAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTCGATACAAAAGAAAAGCTAGAAGTCAGGAGACGAGAAGTTTTAGCACGATTGAATCTTGGAAGATCAAAGGGATCCTCAGTCAGATCAACTGCCACAGATCTTTCAAATCCTTCACACTCTCATTATGCCCTTGAACAGAAGTACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTTCCAACCCACGTGTTTCTCAAATGACAAAAGTATCCTCCGACCAGGATTACTTCGCATCTGAATCTATGAATCAAACTGTACATCTCGTCAGGGAAAAGCTTGATCAGATTCAATCAAGCAGTGAACATCTGCAAGCTGGACCCGTGAGCAAGAAGTCACGTGTGGACAACAGAAGGAGAATATAATGCTTACCGGCCTTTATAGAGAATGGCCAGCGGGGGTGTCTACATTGTATCAAAAGCTATTTTGACACATCACATATATGTTTATAGTGTAAATATTTAACAATTCATCTTTATTTACAAAGGTAATAATGGAGTAGAGCATACACCAAAGTTCTGTATGAGGAGCTTTATTTTCTTTTCCCCCTATATTGGGGATCATGATAGTTAAAAAGCATTTTCCATTCATCTCTTTGATGCATATAGAAACCATGAAAGTATCAATCAGTCATGCCAATTGCCACGGCCCAC

Coding sequence (CDS)

ATGCCTCGCTACACAAATGAGCCCCCTGCGGTTCGCGTCTATGCGATTTGCGACGAGTCAAGGTATTTGATTGTGAGGAATGTTCCGGCATTGGGTTGCGGAGATGACTTGCTCAAATTGTTTTCCTCCTACGGAAACGTTGAAGAGTGTAAACCAATGGATGCAGAAGAATGTGATGAATTTACGGATGTTTATTTTATCAAATTTCACTTGGTTAACAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTCGATACAAAAGAAAAGCTAGAAGTCAGGAGACGAGAAGTTTTAGCACGATTGAATCTTGGAAGATCAAAGGGATCCTCAGTCAGATCAACTGCCACAGATCTTTCAAATCCTTCACACTCTCATTATGCCCTTGAACAGAAGTACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTTCCAACCCACGTGTTTCTCAAATGACAAAAGTATCCTCCGACCAGGATTACTTCGCATCTGAATCTATGAATCAAACTGTACATCTCGTCAGGGAAAAGCTTGATCAGATTCAATCAAGCAGTGAACATCTGCAAGCTGGACCCGTGAGCAAGAAGTCACGTGTGGACAACAGAAGGAGAATATAA

Protein sequence

MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI
Homology
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BLAST of MC08g0023 vs. ExPASy Swiss-Prot
Match: A4FVJ7 (RNA-binding protein 48 OS=Danio rerio OX=7955 GN=rbm48 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.4e-24
Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 0 

Query: 10  AVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKF 69
           AV+VY I  ESRYL+V+ VPA+G   +L++LF+ YG +EE +P+D    ++FT+VY I+F
Sbjct: 40  AVKVYTINLESRYLLVQGVPAIGVMAELVQLFALYGVIEEYRPLDEYPAEQFTEVYLIQF 99

Query: 70  HLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLNLGRSKGS 129
             + +AR AKR  DE  F G +L V YAPE+E++ +TK+KL+ RRR V    N      +
Sbjct: 100 QKLTSARAAKRHTDEKSFFGGQLHVCYAPEYETVEETKQKLQDRRRYV----NWASQNAA 159

Query: 130 SVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSD 180
            + S   +++  S S        S + R      +  NP  ++   V+SD
Sbjct: 160 KLHSQQAEVNTESSS--------STDTRTAEAPIMQKNPEEARRENVNSD 197

[Close]
BLAST of MC08g0023 vs. ExPASy Swiss-Prot
Match: Q5R4U2 (RNA-binding protein 48 OS=Pongo abelii OX=9601 GN=RBM48 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-22
Identity = 52/116 (44.83%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 3   RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFT 62
           R    P AV+VY I  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT
Sbjct: 28  REGRRPRAVKVYTINLESQYLLIQGVPAVGVMKELVERFALYGTIEQYNALDEYPAEDFT 87

Query: 63  DVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL 119
           +VY IKF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++KL+VR+  V+
Sbjct: 88  EVYLIKFMNLQSARAAKRKMDEQSFFGGLLHVCYAPEFETVEETRKKLQVRKAYVV 143

[Close]
BLAST of MC08g0023 vs. ExPASy Swiss-Prot
Match: Q5RL73 (RNA-binding protein 48 OS=Homo sapiens OX=9606 GN=RBM48 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.9e-22
Identity = 51/116 (43.97%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 3   RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFT 62
           R    P AV+VY I  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT
Sbjct: 28  REGRRPRAVKVYTINLESQYLLIQGVPAVGVMKELVERFALYGAIEQYNALDEYPAEDFT 87

Query: 63  DVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL 119
           +VY IKF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++KL++R+  V+
Sbjct: 88  EVYLIKFMNLQSARTAKRKMDEQSFFGGLLHVCYAPEFETVEETRKKLQMRKAYVV 143

[Close]
BLAST of MC08g0023 vs. ExPASy Swiss-Prot
Match: Q561R3 (RNA-binding protein 48 OS=Rattus norvegicus OX=10116 GN=Rbm48 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21
Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = 0 

Query: 3   RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFT 62
           R    P AV+VY I  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT
Sbjct: 28  REGRRPRAVKVYTINLESQYLLIQGVPAVGAMKELVERFALYGAIEQYNALDEYPAEDFT 87

Query: 63  DVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR 115
           +VY IKF  + +AR AK+K+DE  F G  L V YAPEFE++ +T++KLE R+
Sbjct: 88  EVYLIKFVKLQSARIAKKKMDEQSFFGGLLHVCYAPEFETVEETRKKLEERK 139

[Close]
BLAST of MC08g0023 vs. ExPASy Swiss-Prot
Match: Q8K2X2 (RNA-binding protein 48 OS=Mus musculus OX=10090 GN=Rbm48 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 49/112 (43.75%), Postives = 76/112 (67.86%), Query Frame = 0 

Query: 3   RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFT 62
           R    P AV+VY I  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT
Sbjct: 28  REGRRPRAVKVYTINLESQYLLIQGVPAVGAMKELVERFALYGAIEQYNALDEYPAEDFT 87

Query: 63  DVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR 115
           +VY IKF  + +AR AK+K+DE  F G  L V YAPEFE++ +T++KL+ R+
Sbjct: 88  EVYLIKFVKLQSARVAKKKMDEQSFFGGLLHVCYAPEFETVEETRKKLQERK 139

[Close]
BLAST of MC08g0023 vs. NCBI nr
Match: XP_022132316.1 (RNA-binding protein 48-like [Momordica charantia])

HSP 1 Score: 443 bits (1139), Expect = 1.13e-156
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ
Sbjct: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. NCBI nr
Match: XP_022152542.1 (RNA-binding protein 48-like [Momordica charantia])

HSP 1 Score: 402 bits (1033), Expect = 1.63e-140
Identity = 203/226 (89.82%), Postives = 216/226 (95.58%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVY ICDESR+LIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE
Sbjct: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFHLV NARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           L+ GRSKGS+VRST T L+NP+HSHY LEQK SLEKRNYGDAALI+NP VSQMTKVSSDQ
Sbjct: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLD+IQSSSEHL+ GP+SKKSRVDNRRRI
Sbjct: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. NCBI nr
Match: XP_022961642.1 (RNA-binding protein 48 isoform X1 [Cucurbita moschata])

HSP 1 Score: 400 bits (1028), Expect = 9.41e-140
Identity = 200/226 (88.50%), Postives = 213/226 (94.25%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           LN GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQ
Sbjct: 121 LNSGRPRGSAVNSATTKFTNPSHSHYTLEQKSSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           DYFASESMNQTVHLVREKLD+IQS SEHL+AGPVSK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. NCBI nr
Match: XP_022997621.1 (RNA-binding protein 48 isoform X1 [Cucurbita maxima])

HSP 1 Score: 398 bits (1023), Expect = 5.44e-139
Identity = 199/226 (88.05%), Postives = 213/226 (94.25%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           L+ GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           DYFASESMNQTVHLVREKLD+IQS SEHL+AGPVSK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. NCBI nr
Match: KAG6598220.1 (RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 395 bits (1014), Expect = 1.28e-137
Identity = 198/226 (87.61%), Postives = 212/226 (93.81%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           L+ GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           DYFASESMNQTVHLVREKLD+IQS SE L+AGPVSK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEDLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. ExPASy TrEMBL
Match: A0A6J1BRX6 (RNA-binding protein 48 OS=Momordica charantia OX=3673 GN=LOC111005197 PE=3 SV=1)

HSP 1 Score: 443 bits (1139), Expect = 5.47e-157
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ
Sbjct: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. ExPASy TrEMBL
Match: A0A6J1DGJ2 (RNA-binding protein 48 OS=Momordica charantia OX=3673 GN=LOC111020241 PE=3 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 7.88e-141
Identity = 203/226 (89.82%), Postives = 216/226 (95.58%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVY ICDESR+LIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE
Sbjct: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFHLV NARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           L+ GRSKGS+VRST T L+NP+HSHY LEQK SLEKRNYGDAALI+NP VSQMTKVSSDQ
Sbjct: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLD+IQSSSEHL+ GP+SKKSRVDNRRRI
Sbjct: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. ExPASy TrEMBL
Match: A0A6J1HAQ6 (RNA-binding protein 48 OS=Cucurbita moschata OX=3662 GN=LOC111462353 PE=3 SV=1)

HSP 1 Score: 400 bits (1028), Expect = 4.56e-140
Identity = 200/226 (88.50%), Postives = 213/226 (94.25%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           LN GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQ
Sbjct: 121 LNSGRPRGSAVNSATTKFTNPSHSHYTLEQKSSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           DYFASESMNQTVHLVREKLD+IQS SEHL+AGPVSK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. ExPASy TrEMBL
Match: A0A6J1K7Z4 (RNA-binding protein 48 OS=Cucurbita maxima OX=3661 GN=LOC111492499 PE=3 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 2.63e-139
Identity = 199/226 (88.05%), Postives = 213/226 (94.25%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           L+ GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           DYFASESMNQTVHLVREKLD+IQS SEHL+AGPVSK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC08g0023 vs. ExPASy TrEMBL
Match: A0A5A7V5K4 (RNA-binding protein 48 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002210 PE=3 SV=1)

HSP 1 Score: 377 bits (968), Expect = 6.33e-131
Identity = 191/226 (84.51%), Postives = 206/226 (91.15%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPR+ +EP AVR Y +CDESRYLIVRNVPALGCGD L KLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFH V NARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHSVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLVDTKEKLEVRRREVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180
           L+ GR +GS+V ST   L+NPS S+Y LEQK SLE RNYGDAALIS+P VSQMT+VSSDQ
Sbjct: 121 LDSGRPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226
           DYFASESMNQTVHLVREKLD+IQSSSEHLQAGP SKKSR+DNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRLDNRRRI 226

[Close]
BLAST of MC08g0023 vs. TAIR 10
Match: AT2G27790.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-64
Identity = 137/255 (53.73%), Postives = 168/255 (65.88%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           M RY +E PAVRVY +CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C E
Sbjct: 1   MGRYKDETPAVRVYTVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVY+IKF L+ NARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Sbjct: 61  FTDVYWIKFRLITNARFAKRKLDESSFLGNRLQISYAPEYENVNDTKDKLESRRKEVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMT 180
           LN  + K +   S  T L+ P      + S    E +Y   + N            + +T
Sbjct: 121 LNPQKEKST---SQVTKLAGPALTQTDNVSSQRREMEYQFHRGN------------APVT 180

Query: 181 KVSSDQDYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVS------------------- 227
           +VSSDQ+YFAS SMNQTV  VREKL++I+ S    +  P S                   
Sbjct: 181 RVSSDQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQI 240

[Close]
BLAST of MC08g0023 vs. TAIR 10
Match: AT2G27790.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-64
Identity = 137/255 (53.73%), Postives = 168/255 (65.88%), Query Frame = 0 

Query: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           M RY +E PAVRVY +CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C E
Sbjct: 1   MGRYKDETPAVRVYTVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAE 60

Query: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVY+IKF L+ NARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Sbjct: 61  FTDVYWIKFRLITNARFAKRKLDESSFLGNRLQISYAPEYENVNDTKDKLESRRKEVLAR 120

Query: 121 LNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMT 180
           LN  + K +   S  T L+ P      + S    E +Y   + N            + +T
Sbjct: 121 LNPQKEKST---SQVTKLAGPALTQTDNVSSQRREMEYQFHRGN------------APVT 180

Query: 181 KVSSDQDYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVS------------------- 227
           +VSSDQ+YFAS SMNQTV  VREKL++I+ S    +  P S                   
Sbjct: 181 RVSSDQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQI 240

[Close]
BLAST of MC08g0023 vs. TAIR 10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 214.9 bits (546), Expect = 6.5e-56
Identity = 123/224 (54.91%), Postives = 152/224 (67.86%), Query Frame = 0 

Query: 15  AICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNN 74
           ++CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY+IKF L+ N
Sbjct: 371 SVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAEFTDVYWIKFRLITN 430

Query: 75  ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLNLGRSKGSSVRST 134
           A    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLARLN  ++K +   S 
Sbjct: 431 A----RKLDESSFLGNRLQISYAPEYESVSDTKEKLETRRKEVLARLNPHKAKST---SQ 490

Query: 135 ATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESM 194
            T L+ P      + S    E  Y   + N            + +T+VSS Q+YFAS SM
Sbjct: 491 VTKLAGPALTQTDNFSPRRREMDYQFHRGN------------APVTRVSSYQEYFASSSM 550

Query: 195 NQTVHLVREKLDQIQSSSEHLQAGPVS------KKSRVDNRRRI 227
           NQ V  VREKL++I+ S    +  P S      K++RVDNRRRI
Sbjct: 551 NQMVKTVREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 575

[Close]
BLAST of MC08g0023 vs. TAIR 10
Match: AT5G27300.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 214.9 bits (546), Expect = 6.5e-56
Identity = 123/224 (54.91%), Postives = 152/224 (67.86%), Query Frame = 0 

Query: 15  AICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNN 74
           ++CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY+IKF L+ N
Sbjct: 346 SVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAEFTDVYWIKFRLITN 405

Query: 75  ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLNLGRSKGSSVRST 134
           A    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLARLN  ++K +   S 
Sbjct: 406 A----RKLDESSFLGNRLQISYAPEYESVSDTKEKLETRRKEVLARLNPHKAKST---SQ 465

Query: 135 ATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESM 194
            T L+ P      + S    E  Y   + N            + +T+VSS Q+YFAS SM
Sbjct: 466 VTKLAGPALTQTDNFSPRRREMDYQFHRGN------------APVTRVSSYQEYFASSSM 525

Query: 195 NQTVHLVREKLDQIQSSSEHLQAGPVS------KKSRVDNRRRI 227
           NQ V  VREKL++I+ S    +  P S      K++RVDNRRRI
Sbjct: 526 NQMVKTVREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 550

The following BLAST results are available for this feature:
BLAST of MC08g0023 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A4FVJ78.4e-2438.24RNA-binding protein 48 OS=Danio rerio OX=7955 GN=rbm48 PE=2 SV=1[more]
Q5R4U22.1e-2244.83RNA-binding protein 48 OS=Pongo abelii OX=9601 GN=RBM48 PE=2 SV=1[more]
Q5RL737.9e-2243.97RNA-binding protein 48 OS=Homo sapiens OX=9606 GN=RBM48 PE=1 SV=1[more]
Q561R31.0e-2144.64RNA-binding protein 48 OS=Rattus norvegicus OX=10116 GN=Rbm48 PE=2 SV=1[more]
Q8K2X23.0e-2143.75RNA-binding protein 48 OS=Mus musculus OX=10090 GN=Rbm48 PE=2 SV=2[more]
BLAST of MC08g0023 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022132316.11.13e-156100.00RNA-binding protein 48-like [Momordica charantia][more]
XP_022152542.11.63e-14089.82RNA-binding protein 48-like [Momordica charantia][more]
XP_022961642.19.41e-14088.50RNA-binding protein 48 isoform X1 [Cucurbita moschata][more]
XP_022997621.15.44e-13988.05RNA-binding protein 48 isoform X1 [Cucurbita maxima][more]
KAG6598220.11.28e-13787.61RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of MC08g0023 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BRX65.47e-157100.00RNA-binding protein 48 OS=Momordica charantia OX=3673 GN=LOC111005197 PE=3 SV=1[more]
A0A6J1DGJ27.88e-14189.82RNA-binding protein 48 OS=Momordica charantia OX=3673 GN=LOC111020241 PE=3 SV=1[more]
A0A6J1HAQ64.56e-14088.50RNA-binding protein 48 OS=Cucurbita moschata OX=3662 GN=LOC111462353 PE=3 SV=1[more]
A0A6J1K7Z42.63e-13988.05RNA-binding protein 48 OS=Cucurbita maxima OX=3661 GN=LOC111492499 PE=3 SV=1[more]
A0A5A7V5K46.33e-13184.51RNA-binding protein 48 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold5... [more]
BLAST of MC08g0023 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27790.11.7e-6453.73RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT2G27790.21.7e-6453.73RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G27300.16.5e-5654.91pentatricopeptide (PPR) repeat-containing protein [more]
AT5G27300.26.5e-5654.91pentatricopeptide (PPR) repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 17..114
e-value: 1.6E-9
score: 39.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 23..92
e-value: 4.6E-6
score: 26.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 21..99
score: 9.950859
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..226
IPR039599RNA-binding protein 48PANTHERPTHR20957UNCHARACTERIZEDcoord: 3..226
IPR034264RBM48, RNA recognition motifCDDcd12442RRM_RBM48coord: 11..110
e-value: 4.63066E-56
score: 172.092
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 7..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g0023.1MC08g0023.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding