MC07g_new0404 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0404
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC07: 16185312 .. 16186247 (+)
RNA-Seq Expression	MC07g_new0404
Synteny	MC07g_new0404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTGTTTGCAGGCTTCGTAGCTGCGCCAGGAAGGTTTCTTGTCCTCATACCTCACTGCAGATGCAGGTAACTCAGTTTCTTGCTTACAAACACTCAGTTTCTTGCTTACAAACTTGATTCGGACTGTATTTTCTGCTGGTTGCTCTGTATTCTGTAGTTTATGCTCGCAGTCGCAATTGCATAGTTTTCATACGCGCATCGATGGGAAAGGGGGAGAGGTCGCGCCACTGGAGGAAGAACAAAGAGATGCCTCTGCTCTTCAATCAAATCACACCATCTCACAACTTCTTCAGCTTCCAAAGGTTAGAGAAAATGCAGTCAAAGCAATATTATTCTCGTCACTCTATTTATTTTCTGTTTGTTATTTTGTCCAGAACATTACATTAGTGAGTTAAATTTTAATTTCATTAAATTATATCTTAAACTCAAATAAGTAGACTTGATTTAATACTTTCATACACTAAAATAAAATTTAAACAAAAATTAATGTAAGAGAGTTGAATGGTAAGATATTATTTCACACCTTCTAATGATTAATCATTCTGTTGTAAGAATACAGACTTAATTGTTGAGATATAACCATTACACTTGAAAGACCAAATCATTACATTAAAAAAAAGAAGTATATAAGGAAAGAGAGCTCAAGTAAAAACTAGAAATGTGATTTAACTAAGAATGTACTACTTTTGAATAATCTTCAAGTATTGATCCTTATGAACATCAATCATTCAGTACCCAAATGGTAAAGTGAAGATAATGTCACCTCAACAGAAAAAAATTACAAAAACTTTGGACCTGTTTCCATAGCCAACAATGCAAGTATGGCACTGTACATTAGACAATGATTGAGAACACCACCGAGTCTTCTCTCTTCCCTGCTAGCTCTACTGGAGGGGCCAACCCCAACAGAGAATTTGGAAGCTTAAACTAG

mRNA sequence

ATGAACTTGTTTGCAGGCTTCGTAGCTGCGCCAGGAAGGTTTCTTGTCCTCATACCTCACTGCAGATGCAGTTTATGCTCGCAGTCGCAATTGCATAGTTTTCATACGCGCATCGATGGGAAAGGGGGAGAGGTCGCGCCACTGGAGGAAGAACAAAGAGATGCCTCTGCTCTTCAATCAAATCACACCATCTCACAACTTCTTCAGCTTCCAAAGACAATGATTGAGAACACCACCGAGTCTTCTCTCTTCCCTGCTAGCTCTACTGGAGGGGCCAACCCCAACAGAGAATTTGGAAGCTTAAACTAG

Coding sequence (CDS)

ATGAACTTGTTTGCAGGCTTCGTAGCTGCGCCAGGAAGGTTTCTTGTCCTCATACCTCACTGCAGATGCAGTTTATGCTCGCAGTCGCAATTGCATAGTTTTCATACGCGCATCGATGGGAAAGGGGGAGAGGTCGCGCCACTGGAGGAAGAACAAAGAGATGCCTCTGCTCTTCAATCAAATCACACCATCTCACAACTTCTTCAGCTTCCAAAGACAATGATTGAGAACACCACCGAGTCTTCTCTCTTCCCTGCTAGCTCTACTGGAGGGGCCAACCCCAACAGAGAATTTGGAAGCTTAAACTAG

Protein sequence

MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQSNHTISQLLQLPKTMIENTTESSLFPASSTGGANPNREFGSLN

Homology

[Close]

BLAST of MC07g_new0404 vs. NCBI nr
Match: XP_022138862.1 (uncharacterized protein LOC111009928 isoform X2 [Momordica charantia])

HSP 1 Score: 152 bits (384), Expect = 1.07e-45
Identity = 73/83 (87.95%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60
          MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS
Sbjct: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60

Query: 61 NHTISQLLQLPKTMIENTTESSL 83
          NHTISQLLQLPK +      S++
Sbjct: 61 NHTISQLLQLPKDLRRGVLSSNI 83

[Close]

BLAST of MC07g_new0404 vs. NCBI nr
Match: XP_022138863.1 (uncharacterized protein LOC111009928 isoform X3 [Momordica charantia])

HSP 1 Score: 151 bits (381), Expect = 2.33e-45
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60
          MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS
Sbjct: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60

Query: 61 NHTISQLLQLPK 72
          NHTISQLLQLPK
Sbjct: 61 NHTISQLLQLPK 72

[Close]

BLAST of MC07g_new0404 vs. NCBI nr
Match: XP_022138861.1 (uncharacterized protein LOC111009928 isoform X1 [Momordica charantia])

HSP 1 Score: 151 bits (381), Expect = 1.38e-44
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60
          MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS
Sbjct: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60

Query: 61 NHTISQLLQLPK 72
          NHTISQLLQLPK
Sbjct: 61 NHTISQLLQLPK 72

[Close]

BLAST of MC07g_new0404 vs. ExPASy TrEMBL
Match: A0A6J1CCE4 (uncharacterized protein LOC111009928 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009928 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 5.16e-46
Identity = 73/83 (87.95%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60
          MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS
Sbjct: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60

Query: 61 NHTISQLLQLPKTMIENTTESSL 83
          NHTISQLLQLPK +      S++
Sbjct: 61 NHTISQLLQLPKDLRRGVLSSNI 83

[Close]

BLAST of MC07g_new0404 vs. ExPASy TrEMBL
Match: A0A6J1CEB3 (uncharacterized protein LOC111009928 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111009928 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 1.13e-45
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60
          MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS
Sbjct: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60

Query: 61 NHTISQLLQLPK 72
          NHTISQLLQLPK
Sbjct: 61 NHTISQLLQLPK 72

[Close]

BLAST of MC07g_new0404 vs. ExPASy TrEMBL
Match: A0A6J1CAY3 (uncharacterized protein LOC111009928 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009928 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 6.70e-45
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60
          MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS
Sbjct: 1  MNLFAGFVAAPGRFLVLIPHCRCSLCSQSQLHSFHTRIDGKGGEVAPLEEEQRDASALQS 60

Query: 61 NHTISQLLQLPK 72
          NHTISQLLQLPK
Sbjct: 61 NHTISQLLQLPK 72

The following BLAST results are available for this feature:

BLAST of MC07g_new0404 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0404 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138862.1	1.07e-45	87.95	uncharacterized protein LOC111009928 isoform X2 [Momordica charantia]	[more]
XP_022138863.1	2.33e-45	100.00	uncharacterized protein LOC111009928 isoform X3 [Momordica charantia]	[more]
XP_022138861.1	1.38e-44	100.00	uncharacterized protein LOC111009928 isoform X1 [Momordica charantia]	[more]

BLAST of MC07g_new0404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCE4	5.16e-46	87.95	uncharacterized protein LOC111009928 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CEB3	1.13e-45	100.00	uncharacterized protein LOC111009928 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CAY3	6.70e-45	100.00	uncharacterized protein LOC111009928 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of MC07g_new0404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g_new0404.1	MC07g_new0404.1	mRNA