MC07g_new0264 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0264
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC07: 8928752 .. 8929462 (-)
RNA-Seq Expression	MC07g_new0264
Synteny	MC07g_new0264

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATAATGGGAGGTCCGATAGAGAGAGAATCTTGCAGAAAGAGAAAGGCGAGCATACCAGAAACCAGGGCGAGCCTCTGACAACATGAGATATACCATGCATTTGTTGCAGTAATCGAGTTCTCAGATGATGAGGCGACTCACGTCCTCCACCCACATAACGATGCACTGGTTATTACTCTGAAAATAGCCAATGTAATGGTGCATCGGATCTTGGTAGATGGGGGTAGCTCGACATATATCATTTCCTTGACAGCTTACAAAGCCATGGATCTAGGAGAGAAGGCATTTAAAAGTAGCCCAGCACCGTTGGTAGGGTTTGGAGGAGAACGGGTCATCCTTGAAGGAAGAATAGAATTGTCAGTGACGTTCAGAAGTGGGCCAAAAAGCATCACTAAAATGGTAGACTTTTTGGTTGTCGACTACGCATCCTCCTAGAATGCGATATTATGAAGACCAACAATGCACATGCTCAAAGCAATACCATCCACATACCATCGGTCCATGAAATTCCCAACACCTGGTGGAATAGGTGAGATCAAAGGAGAGCAACGAGTATCACGTGAGTGATACTACGCTTCTATGAAGGGCGGCGACAGGGCTTCTACTACGGGTGACCGTTGATTTCTTTACTCGACTAACGCTTCTATGTTTTTTATCTCACGAAATTTTAGATTATTGGTTTTTACGTTTTGAATCAATAAAGTATCCA

mRNA sequence

ATGGTGCATCGGATCTTGGTAGATGGGGGTAGCTCGACATATATCATTTCCTTGACAGCTTACAAAGCCATGGATCTAGGAGAGAAGGCATTTAAAAGTAGCCCAGCACCGTTGGTAGGGTTTGGAGGAGAACGGGTCATCCTTGAAGGAAGAATAGAATTGTCAGTGACGTTCAGAAGTGGGCCAAAAAGCATCACTAAAATGGTAGACTTTTTGGTTGTCGACTACGCATCCTCCTAG

Coding sequence (CDS)

ATGGTGCATCGGATCTTGGTAGATGGGGGTAGCTCGACATATATCATTTCCTTGACAGCTTACAAAGCCATGGATCTAGGAGAGAAGGCATTTAAAAGTAGCCCAGCACCGTTGGTAGGGTTTGGAGGAGAACGGGTCATCCTTGAAGGAAGAATAGAATTGTCAGTGACGTTCAGAAGTGGGCCAAAAAGCATCACTAAAATGGTAGACTTTTTGGTTGTCGACTACGCATCCTCCTAG

Protein sequence

MVHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSGPKSITKMVDFLVVDYASS

Homology

[Close]

BLAST of MC07g_new0264 vs. NCBI nr
Match: XP_022155186.1 (uncharacterized protein LOC111022321 [Momordica charantia])

HSP 1 Score: 132 bits (331), Expect = 1.46e-36
Identity = 68/78 (87.18%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VHRILVDGGSS  IIS TAYKAMDLGEK  KSSPAPLVGFGGERVILEGRIEL VTF SG
Sbjct: 70  VHRILVDGGSSADIISWTAYKAMDLGEKVLKSSPAPLVGFGGERVILEGRIELPVTFGSG 129

Query: 62  PKSITKMVDFLVVDYASS 79
           PKS+TKMVDFLVV+Y SS
Sbjct: 130 PKSVTKMVDFLVVNYTSS 147

[Close]

BLAST of MC07g_new0264 vs. NCBI nr
Match: XP_022155873.1 (uncharacterized protein LOC111022886 [Momordica charantia])

HSP 1 Score: 133 bits (334), Expect = 2.87e-36
Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VHRILVDGGSSTYIISLTAYKAMDLGEKA KSSP PLVGFGGERVI EGRIEL V F SG
Sbjct: 137 VHRILVDGGSSTYIISLTAYKAMDLGEKALKSSPVPLVGFGGERVIPEGRIELPVMFGSG 196

Query: 62  PKSITKMVDFLVVDYASS 79
           PKSI KMVDFLVV YASS
Sbjct: 197 PKSIIKMVDFLVVYYASS 214

[Close]

BLAST of MC07g_new0264 vs. NCBI nr
Match: XP_022150858.1 (uncharacterized protein LOC111018902 [Momordica charantia])

HSP 1 Score: 126 bits (316), Expect = 1.13e-33
Identity = 67/78 (85.90%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VH ILVDGGSS  IISLTAYK MDLGE+  KSSPAPLVGFGGE VI EGRIEL VTF SG
Sbjct: 127 VHWILVDGGSSPDIISLTAYKTMDLGERGLKSSPAPLVGFGGEWVIPEGRIELPVTFGSG 186

Query: 62  PKSITKMVDFLVVDYASS 79
           PKSITKMVDFLVVDYASS
Sbjct: 187 PKSITKMVDFLVVDYASS 204

[Close]

BLAST of MC07g_new0264 vs. NCBI nr
Match: XP_022158687.1 (uncharacterized protein LOC111025147 [Momordica charantia])

HSP 1 Score: 123 bits (309), Expect = 3.07e-33
Identity = 63/78 (80.77%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VHRILVDGGSS  IIS T YK MDLGEK  KSSPAPL+GFG ERVI EGRIEL VTF SG
Sbjct: 70  VHRILVDGGSSADIISWTTYKVMDLGEKVLKSSPAPLIGFGRERVIPEGRIELHVTFGSG 129

Query: 62  PKSITKMVDFLVVDYASS 79
           PKS+TKM+DFLVVDY SS
Sbjct: 130 PKSVTKMMDFLVVDYTSS 147

[Close]

BLAST of MC07g_new0264 vs. NCBI nr
Match: XP_022156748.1 (uncharacterized protein LOC111023587 [Momordica charantia])

HSP 1 Score: 125 bits (313), Expect = 3.93e-33
Identity = 65/78 (83.33%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VHRILVDGGSS  IIS TAYKAMDL EK  KSSPAPLVGFGGERVI EGRIEL VTF SG
Sbjct: 136 VHRILVDGGSSADIISWTAYKAMDLEEKVLKSSPAPLVGFGGERVISEGRIELPVTFGSG 195

Query: 62  PKSITKMVDFLVVDYASS 79
           PK +TKMVDFLVV+Y SS
Sbjct: 196 PKGVTKMVDFLVVNYTSS 213

[Close]

BLAST of MC07g_new0264 vs. ExPASy TrEMBL
Match: A0A6J1DQY2 (uncharacterized protein LOC111022321 OS=Momordica charantia OX=3673 GN=LOC111022321 PE=4 SV=1)

HSP 1 Score: 132 bits (331), Expect = 7.05e-37
Identity = 68/78 (87.18%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VHRILVDGGSS  IIS TAYKAMDLGEK  KSSPAPLVGFGGERVILEGRIEL VTF SG
Sbjct: 70  VHRILVDGGSSADIISWTAYKAMDLGEKVLKSSPAPLVGFGGERVILEGRIELPVTFGSG 129

Query: 62  PKSITKMVDFLVVDYASS 79
           PKS+TKMVDFLVV+Y SS
Sbjct: 130 PKSVTKMVDFLVVNYTSS 147

[Close]

BLAST of MC07g_new0264 vs. ExPASy TrEMBL
Match: A0A6J1DP33 (uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022886 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 1.39e-36
Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VHRILVDGGSSTYIISLTAYKAMDLGEKA KSSP PLVGFGGERVI EGRIEL V F SG
Sbjct: 137 VHRILVDGGSSTYIISLTAYKAMDLGEKALKSSPVPLVGFGGERVIPEGRIELPVMFGSG 196

Query: 62  PKSITKMVDFLVVDYASS 79
           PKSI KMVDFLVV YASS
Sbjct: 197 PKSIIKMVDFLVVYYASS 214

[Close]

BLAST of MC07g_new0264 vs. ExPASy TrEMBL
Match: A0A6J1DAK4 (uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018902 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 5.48e-34
Identity = 67/78 (85.90%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VH ILVDGGSS  IISLTAYK MDLGE+  KSSPAPLVGFGGE VI EGRIEL VTF SG
Sbjct: 127 VHWILVDGGSSPDIISLTAYKTMDLGERGLKSSPAPLVGFGGEWVIPEGRIELPVTFGSG 186

Query: 62  PKSITKMVDFLVVDYASS 79
           PKSITKMVDFLVVDYASS
Sbjct: 187 PKSITKMVDFLVVDYASS 204

[Close]

BLAST of MC07g_new0264 vs. ExPASy TrEMBL
Match: A0A6J1DXV4 (uncharacterized protein LOC111025147 OS=Momordica charantia OX=3673 GN=LOC111025147 PE=4 SV=1)

HSP 1 Score: 123 bits (309), Expect = 1.49e-33
Identity = 63/78 (80.77%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VHRILVDGGSS  IIS T YK MDLGEK  KSSPAPL+GFG ERVI EGRIEL VTF SG
Sbjct: 70  VHRILVDGGSSADIISWTTYKVMDLGEKVLKSSPAPLIGFGRERVIPEGRIELHVTFGSG 129

Query: 62  PKSITKMVDFLVVDYASS 79
           PKS+TKM+DFLVVDY SS
Sbjct: 130 PKSVTKMMDFLVVDYTSS 147

[Close]

BLAST of MC07g_new0264 vs. ExPASy TrEMBL
Match: A0A6J1DRG9 (uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023587 PE=4 SV=1)

HSP 1 Score: 125 bits (313), Expect = 1.90e-33
Identity = 65/78 (83.33%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 2   VHRILVDGGSSTYIISLTAYKAMDLGEKAFKSSPAPLVGFGGERVILEGRIELSVTFRSG 61
           VHRILVDGGSS  IIS TAYKAMDL EK  KSSPAPLVGFGGERVI EGRIEL VTF SG
Sbjct: 136 VHRILVDGGSSADIISWTAYKAMDLEEKVLKSSPAPLVGFGGERVISEGRIELPVTFGSG 195

Query: 62  PKSITKMVDFLVVDYASS 79
           PK +TKMVDFLVV+Y SS
Sbjct: 196 PKGVTKMVDFLVVNYTSS 213

The following BLAST results are available for this feature:

BLAST of MC07g_new0264 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0264 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155186.1	1.46e-36	87.18	uncharacterized protein LOC111022321 [Momordica charantia]	[more]
XP_022155873.1	2.87e-36	89.74	uncharacterized protein LOC111022886 [Momordica charantia]	[more]
XP_022150858.1	1.13e-33	85.90	uncharacterized protein LOC111018902 [Momordica charantia]	[more]
XP_022158687.1	3.07e-33	80.77	uncharacterized protein LOC111025147 [Momordica charantia]	[more]
XP_022156748.1	3.93e-33	83.33	uncharacterized protein LOC111023587 [Momordica charantia]	[more]

BLAST of MC07g_new0264 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQY2	7.05e-37	87.18	uncharacterized protein LOC111022321 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DP33	1.39e-36	89.74	uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DAK4	5.48e-34	85.90	uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DXV4	1.49e-33	80.77	uncharacterized protein LOC111025147 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DRG9	1.90e-33	83.33	uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of MC07g_new0264 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 4..75 e-value: 8.48006E-9 score: 45.7904

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g_new0264.1	MC07g_new0264.1	mRNA