MC07g_new0256 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g_new0256
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC07: 8646857 .. 8648254 (-)
RNA-Seq ExpressionMC07g_new0256
SyntenyMC07g_new0256
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGAGCATGCAAGACTGGAGCAATTTTATGCAGAAACTAGGTAGAACAACTCGGTAACTTTCCTACGTTGGGATTTTAAATGTGCCTATACAGAAAGTGAGTGTTGCCCTAAACTCAGGGCCCAATATAAAAGCACATTCTATCCCAGCCAACAAATGATATCCAAAGAAATAAAATATTCACTATTTGGTTCTGAAGCTGATGCGAGCAAACCTCTATTTTTTAGAAAGAGCTGATGACAAAAGCTAGAGCCACCTGTGTTCTTCATGGGGTAGGTGGTTGTAGTGGATTGATGAGTGTTCTTCTACAAAATGAGTGACTTATTTTCTTCACCCATGGTGTATTTCCCTACCCCCATGAACTAAACCCCGTTTTCAGGGGAGATCCTATGTTGTTACTCGCAATAGTGACGTTATAGTTAATTTCATTTGCTGATAAATGGAGTTGTGCGAATATTTTCATCTTACATGTTTTTGCTAGCTACATTTATCAGCTTGCATGCTCTAGTATGTCTAGGAAGGTATACAGGTTGTATATTTGGCTTTCTTTGTGGTTAGACTATTTTACTCGAGTAGATTTGTGGATGCTTAAGAATAAGGTTCATTAACCATGCTTAGAAGTGTTATTTATACTGGGTTATTTAACAATAGAAGTTGTAAATATTCATTATGGGTGTCTTAGAAGGGAACCACATTGGTTTGAGCATCAACAACATTTTTATGCTAGAGTTTCGTATGTTAGTGAGTGAAGCATATCAGAGTCTCACACATCTTAATACCATCTCTATTACTCTTTTTTCACTCGTTGTGCTACAATATTTTTCTACCTCAGCATCTGCTTAAACATCATTTCTCTCCTGAAGTGATACAACACTATATATTATTTTTAATTTTGCATTTTTGTATCCTTAATGCATACTTAAGGTCTTGTGGATTTCAACCTTTTTTATACTACAACCAGCGAGAATAATGTACATTTGCACTTGCATTCACATCGTTTGCGGATACGTAACAAGTTTTTGATTGCGGGGAACTTTGTCATTATACATTATGTTTTAGTGGTTAAGGATACAGAGCTTAAAGATTTTCTTTCTCTTGTATTCTTGATTTTGTTGTAGGTTCATTAACAATTTTGAAAGCTTGGAGTATATAATTGATCATGAAATAGAGAAAACTTTCCATCAAAGAATAAATGAACAAATAAGGAACCAAGCTGCAATAGACATGAACCCGCCACGAAATCCATCAAATTTGAAAGTGGAAGAAATAGTAGATGGGGAACCTGTAGTCGCTATCCCAGCAGCAGCAACGCCCCTTCTCAATTCTGTATTGCAAGTCGATGATATAGATCGAAAGATAAGAGCATATGCGGCTTCAAAATTAGCGAGGACGTGA

mRNA sequence

ATGCCAGAGCATGCAAGACTGGAGCAATTTTATGCAGAAACTAGGTTCATTAACAATTTTGAAAGCTTGGAGTATATAATTGATCATGAAATAGAGAAAACTTTCCATCAAAGAATAAATGAACAAATAAGGAACCAAGCTGCAATAGACATGAACCCGCCACGAAATCCATCAAATTTGAAAGTGGAAGAAATAGTAGATGGGGAACCTGTAGTCGCTATCCCAGCAGCAGCAACGCCCCTTCTCAATTCTGTATTGCAAGTCGATGATATAGATCGAAAGATAAGAGCATATGCGGCTTCAAAATTAGCGAGGACGTGA

Coding sequence (CDS)

ATGCCAGAGCATGCAAGACTGGAGCAATTTTATGCAGAAACTAGGTTCATTAACAATTTTGAAAGCTTGGAGTATATAATTGATCATGAAATAGAGAAAACTTTCCATCAAAGAATAAATGAACAAATAAGGAACCAAGCTGCAATAGACATGAACCCGCCACGAAATCCATCAAATTTGAAAGTGGAAGAAATAGTAGATGGGGAACCTGTAGTCGCTATCCCAGCAGCAGCAACGCCCCTTCTCAATTCTGTATTGCAAGTCGATGATATAGATCGAAAGATAAGAGCATATGCGGCTTCAAAATTAGCGAGGACGTGA

Protein sequence

MPEHARLEQFYAETRFINNFESLEYIIDHEIEKTFHQRINEQIRNQAAIDMNPPRNPSNLKVEEIVDGEPVVAIPAAATPLLNSVLQVDDIDRKIRAYAASKLART
Homology
[Close]
BLAST of MC07g_new0256 vs. NCBI nr
Match: XP_022153147.1 (probable serine/threonine-protein kinase PBL11 [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 1.83e-06
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0 

Query: 17  INNFESLEYIIDHEIEKTFHQRINEQIRNQAAIDMNP----PRNPSNLKVEEIVDGEPVV 76
           +++ + LEY++D+EIE TF +RI EQ R Q  ++ NP    PR P N  VE        V
Sbjct: 1   MHDLQRLEYLLDNEIECTFPRRIREQRRQQ--VETNPMDQLPRLP-NPMVE--------V 60

Query: 77  AIPAAATPLLNSVLQVDDIDRKIRAYAA 100
            +PAAA P LN++L  DD +R IRAYAA
Sbjct: 61  VVPAAA-PTLNTILLADDGERAIRAYAA 76

[Close]
BLAST of MC07g_new0256 vs. NCBI nr
Match: XP_022150863.1 (uncharacterized protein LOC111018910 [Momordica charantia])

HSP 1 Score: 48.5 bits (114), Expect = 9.14e-04
Identity = 28/56 (50.00%), Postives = 32/56 (57.14%), Query Frame = 0 

Query: 51  MNPPRN------PSNLKVEEIVDGEPVVAIPAAATPLLNSVLQVDDIDRKIRAYAA 100
           MNPP        P N+++EEIVDG PV        P LN VL    IDR+IRAYAA
Sbjct: 1   MNPPNPNLHQPIPPNVRIEEIVDGVPVATNHEVIVPSLNVVLLAKAIDREIRAYAA 56

[Close]
BLAST of MC07g_new0256 vs. ExPASy TrEMBL
Match: A0A6J1DI54 (probable serine/threonine-protein kinase PBL11 OS=Momordica charantia OX=3673 GN=LOC111020716 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.85e-07
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0 

Query: 17  INNFESLEYIIDHEIEKTFHQRINEQIRNQAAIDMNP----PRNPSNLKVEEIVDGEPVV 76
           +++ + LEY++D+EIE TF +RI EQ R Q  ++ NP    PR P N  VE        V
Sbjct: 1   MHDLQRLEYLLDNEIECTFPRRIREQRRQQ--VETNPMDQLPRLP-NPMVE--------V 60

Query: 77  AIPAAATPLLNSVLQVDDIDRKIRAYAA 100
            +PAAA P LN++L  DD +R IRAYAA
Sbjct: 61  VVPAAA-PTLNTILLADDGERAIRAYAA 76

[Close]
BLAST of MC07g_new0256 vs. ExPASy TrEMBL
Match: A0A6J1DAK9 (uncharacterized protein LOC111018910 OS=Momordica charantia OX=3673 GN=LOC111018910 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.42e-04
Identity = 28/56 (50.00%), Postives = 32/56 (57.14%), Query Frame = 0 

Query: 51  MNPPRN------PSNLKVEEIVDGEPVVAIPAAATPLLNSVLQVDDIDRKIRAYAA 100
           MNPP        P N+++EEIVDG PV        P LN VL    IDR+IRAYAA
Sbjct: 1   MNPPNPNLHQPIPPNVRIEEIVDGVPVATNHEVIVPSLNVVLLAKAIDREIRAYAA 56

The following BLAST results are available for this feature:
BLAST of MC07g_new0256 vs.
Match NameE-valueIdentityDescription
BLAST of MC07g_new0256 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153147.11.83e-0646.59probable serine/threonine-protein kinase PBL11 [Momordica charantia][more]
XP_022150863.19.14e-0450.00uncharacterized protein LOC111018910 [Momordica charantia][more]
BLAST of MC07g_new0256 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DI548.85e-0746.59probable serine/threonine-protein kinase PBL11 OS=Momordica charantia OX=3673 GN... [more]
A0A6J1DAK94.42e-0450.00uncharacterized protein LOC111018910 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
BLAST of MC07g_new0256 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g_new0256.1MC07g_new0256.1mRNA