MC07g_new0192 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0192
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC07: 6819172 .. 6820414 (+)
RNA-Seq Expression	MC07g_new0192
Synteny	MC07g_new0192

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGACGTCGGGAGTTCGCTCGAAAGAACTGGCGTACCAAGGGGGATCTTTCGATCACTCTGTTAGATCCAAGGCACGTCTTCATCAAGCTCTCGAACAAAGAAGATATGCACCAAAAAACAAAGAGAAGTTTTTGATTGAGGGGTTGATGTTTAGGGTTTTCTGCTGGAGCCATGATTTCCGTCTCCGCAATGGTGATCCAATGCATGCGCCTATTTGGGGCGACCCCATCCGCCTATTGTCTTCTTCTTTGAGTTTCGCCTGTTTTCTATCGTCTCGACTTTCGGAATTGGCCTGACCCTTGAAGGTCCTACGAAGCTTGTCTCACGCCCCCCTCTCACAATAAAGCTAGGGTTTGTGTAGAAATCGGTCTTCTCAAGGAAAACCCCCCAAATCGTGTTTTGATTGGATCGACTGTGTATGTATGGATCACTAGCAAGAAATCGTTTCTTTTTGAATACCTAAGTTCTGCACGCATTGCAGACGACAAGGTCATGCCCGTCACGAATGCAAAGTGGCGAATAAGGAACCTGGTGTCAACCCGTCACCGAGAATGGCCTATGTTCCAAGAACCAATGCTACCCAGCACCTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGGGGCGAAGAGCTTGAACCAGATAACAATCCCCAAGCTTCTGTTCTTCAACAACCGGAGTATTTAGCTATTGGAAAATCGCCTTCGGTTAACGCAGCCCCTAATACCGGCGGTAGCTCTGCCTCATGGGGACAGCAGGAAGAGGAAAGAGTTTGAAGAAATTTTGTTGATAATCAAGACCCCCTACGGATCATGCACTGGATCCATCCGGCCCGGAATCCAATGAACCGATGGTTAACCCTCTTTTTTTAGTGATTGCCATACAGAGACAAGTTCGCGCTTTTTCCTTAGAAGGAAGGTCCTCAAAGCCTCTTCATTCCAATGATCATGATGAAGAATCCAATAGCTCCTCTCAGGACCCACAATCATCGAGATTTGAGAAAGATTTGAAACCGAAGCCCCCGAACAAGGCAGCACCTGGGTAAGAGCGCGACTACTAGGGCACAATCCAAACTTGGGGCTAAGCCCCACCCCACTATATTTCCAAAATTTCCACAATTGAAATTGTTTGGAATGCAAGGGGCGTCAGCAATGGCCCCACGCGTAGGCGTCTCGACGATCTTGCTCGGACCGGGCTTTAG

mRNA sequence

ATGAGGACGTCGGGAGTTCGCTCGAAAGAACTGGCGTACCAAGGGGGATCTTTCGATCACTCTGTTAGATCCAAGGCACGTCTTCATCAAGCTCTCGAACAAAGAAGATATGCACCAAAAAACAAAGAGAAGTTTTTGATTGAGGGGTTGATGTTTAGGGTTTTCTGCTGGAGCCATGATTTCCGTCTCCGCAATGGTGATCCAATGCATGCGCCTATTTGGGGCGACCCCATCCGCCTATTGTCTTCTTCTTTGAGTTTCGCCTCACCTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGGGGCGAAGAGCTTGAACCAGATAACAATCCCCAAGCTTCTGTTCTTCAACAACCGGAGTATTTAGCTATTGGAAAATCGCCTTCGGTTAACGCAGCCCCTAATACCGGCGTGATTGCCATACAGAGACAAGTTCGCGCTTTTTCCTTAGAAGGAAGGTCCTCAAAGCCTCTTCATTCCAATGATCATGATGAAGAATCCAATAGCTCCTCTCAGGACCCACAATCATCGAGATTTGAGAAAGATTTGAAACCGAAGCCCCCGAACAAGGCAGCACCTGGGGGCGTCAGCAATGGCCCCACGCGTAGGCGTCTCGACGATCTTGCTCGGACCGGGCTTTAG

Coding sequence (CDS)

ATGAGGACGTCGGGAGTTCGCTCGAAAGAACTGGCGTACCAAGGGGGATCTTTCGATCACTCTGTTAGATCCAAGGCACGTCTTCATCAAGCTCTCGAACAAAGAAGATATGCACCAAAAAACAAAGAGAAGTTTTTGATTGAGGGGTTGATGTTTAGGGTTTTCTGCTGGAGCCATGATTTCCGTCTCCGCAATGGTGATCCAATGCATGCGCCTATTTGGGGCGACCCCATCCGCCTATTGTCTTCTTCTTTGAGTTTCGCCTCACCTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGGGGCGAAGAGCTTGAACCAGATAACAATCCCCAAGCTTCTGTTCTTCAACAACCGGAGTATTTAGCTATTGGAAAATCGCCTTCGGTTAACGCAGCCCCTAATACCGGCGTGATTGCCATACAGAGACAAGTTCGCGCTTTTTCCTTAGAAGGAAGGTCCTCAAAGCCTCTTCATTCCAATGATCATGATGAAGAATCCAATAGCTCCTCTCAGGACCCACAATCATCGAGATTTGAGAAAGATTTGAAACCGAAGCCCCCGAACAAGGCAGCACCTGGGGGCGTCAGCAATGGCCCCACGCGTAGGCGTCTCGACGATCTTGCTCGGACCGGGCTTTAG

Protein sequence

MRTSGVRSKELAYQGGSFDHSVRSKARLHQALEQRRYAPKNKEKFLIEGLMFRVFCWSHDFRLRNGDPMHAPIWGDPIRLLSSSLSFASPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAPNTGVIAIQRQVRAFSLEGRSSKPLHSNDHDEESNSSSQDPQSSRFEKDLKPKPPNKAAPGGVSNGPTRRRLDDLARTGL

Homology

[Close]

BLAST of MC07g_new0192 vs. NCBI nr
Match: KAF3452219.1 (hypothetical protein FNV43_RR08317 [Rhamnella rubrinervis])

HSP 1 Score: 90.1 bits (222), Expect = 6.19e-19
Identity = 46/53 (86.79%), Postives = 48/53 (90.57%), Query Frame = 0


Query: 85  LSFASPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAI 137
           +S  +PTTEVSLRDSDVAAA MQTIEDGPRGEELEPDNNPQA VLQQPE LAI
Sbjct: 79  VSSPAPTTEVSLRDSDVAAAGMQTIEDGPRGEELEPDNNPQAPVLQQPESLAI 131

[Close]

BLAST of MC07g_new0192 vs. NCBI nr
Match: EEF27683.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 90.1 bits (222), Expect = 7.26e-19
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 88  ASPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAP 147
           ++PT E       + AADMQTIEDGPRGEELEPDNNPQA VL++ EYLAIGKSPSVNAA 
Sbjct: 11  SAPTIET------MPAADMQTIEDGPRGEELEPDNNPQAPVLKKSEYLAIGKSPSVNAAS 70

Query: 148 NTGVIAIQRQVRAFSLEGR 166
           NTG  +  R  +   L GR
Sbjct: 71  NTGGSSPSRGQQEEELVGR 83

[Close]

BLAST of MC07g_new0192 vs. NCBI nr
Match: EEF30423.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 94.0 bits (232), Expect = 1.55e-18
Identity = 63/141 (44.68%), Postives = 81/141 (57.45%), Query Frame = 0


Query: 4   SGVRSKELAYQGGSFDHSVRSKARLHQALEQRRYAPKNKEKFLIEGLMFRV--------- 63
           S V S+ELAYQ  SF+HSVRSK RLHQALEQR+Y+ K+KE FLIEGLM R+         
Sbjct: 224 SRVCSQELAYQRRSFNHSVRSKTRLHQALEQRKYSLKDKENFLIEGLMLRITSNQLFLFE 283

Query: 64  ----FCWSHD----FRLRNGDPMHA---PIWGDPIRLLSSSLSFASPTTEVSLRDSDVAA 123
                C   D    +++RN +       P++ +P+  + S      PT E       +  
Sbjct: 284 YLSSVCIVDDKNAKWQIRNLESTRHREWPMFQEPMLPIQSI-----PTIET------MPT 343

[Close]

BLAST of MC07g_new0192 vs. NCBI nr
Match: KAA0059498.1 (hypothetical protein E6C27_scaffold48829G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 4.58e-18
Identity = 62/151 (41.06%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 18  FDHSVRSKARLHQA-----------LEQRRYAPKNKEKFLIEGLMFRVFCWSHDFRLRNG 77
           FDHS+RSKAR               L  R + P      ++    F V  +     L   
Sbjct: 93  FDHSLRSKARFSAGAFRAMVIQCMRLLGRLHPP------IVFFFFFAVSTFGIGLTLEGP 152

Query: 78  DPMHAPIWGDPIRLLSSSLSFASPTTEVS-------LRDSDVAAADMQTIEDGPRGEELE 137
             +   +   P+R+     SF   +  ++           +VAAADM+TI DGPRGEELE
Sbjct: 153 TKL---VSRPPLRIKLGKKSFLFSSARIADEKVMPVTNAKNVAAADMETIFDGPRGEELE 212

Query: 138 PDNNPQASVLQQPEYLAIGKSPSVNAAPNTG 150
           PD NPQAS+LQ+P YLAIGKSPSV AAPNTG
Sbjct: 213 PDKNPQASLLQEPTYLAIGKSPSVEAAPNTG 234

[Close]

BLAST of MC07g_new0192 vs. NCBI nr
Match: TYK04334.1 (hypothetical protein E5676_scaffold84043G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 1.37e-17
Identity = 62/151 (41.06%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 18  FDHSVRSKARLHQA-----------LEQRRYAPKNKEKFLIEGLMFRVFCWSHDFRLRNG 77
           FDHS+RSKAR               L  R + P      ++    F V  +     L   
Sbjct: 163 FDHSLRSKARFSAGAFRAMVIQCMRLLGRLHPP------IVFFFFFAVSTFGIGLTLEGP 222

Query: 78  DPMHAPIWGDPIRLLSSSLSFASPTTEVS-------LRDSDVAAADMQTIEDGPRGEELE 137
             +   +   P+R+     SF   +  ++           +VAAADM+TI DGPRGEELE
Sbjct: 223 TKL---VSRPPLRIKLGKKSFLFSSARIADEKVMPVTNAKNVAAADMETIFDGPRGEELE 282

Query: 138 PDNNPQASVLQQPEYLAIGKSPSVNAAPNTG 150
           PD NPQAS+LQ+P YLAIGKSPSV AAPNTG
Sbjct: 283 PDKNPQASLLQEPTYLAIGKSPSVEAAPNTG 304

[Close]

BLAST of MC07g_new0192 vs. ExPASy TrEMBL
Match: B9T8X8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1985520 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.51e-19
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 88  ASPTTEVSLRDSDVAAADMQTIEDGPRGEELEPDNNPQASVLQQPEYLAIGKSPSVNAAP 147
           ++PT E       + AADMQTIEDGPRGEELEPDNNPQA VL++ EYLAIGKSPSVNAA 
Sbjct: 11  SAPTIET------MPAADMQTIEDGPRGEELEPDNNPQAPVLKKSEYLAIGKSPSVNAAS 70

Query: 148 NTGVIAIQRQVRAFSLEGR 166
           NTG  +  R  +   L GR
Sbjct: 71  NTGGSSPSRGQQEEELVGR 83

[Close]

BLAST of MC07g_new0192 vs. ExPASy TrEMBL
Match: B9T143 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0439640 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.50e-19
Identity = 63/141 (44.68%), Postives = 81/141 (57.45%), Query Frame = 0


Query: 4   SGVRSKELAYQGGSFDHSVRSKARLHQALEQRRYAPKNKEKFLIEGLMFRV--------- 63
           S V S+ELAYQ  SF+HSVRSK RLHQALEQR+Y+ K+KE FLIEGLM R+         
Sbjct: 224 SRVCSQELAYQRRSFNHSVRSKTRLHQALEQRKYSLKDKENFLIEGLMLRITSNQLFLFE 283

Query: 64  ----FCWSHD----FRLRNGDPMHA---PIWGDPIRLLSSSLSFASPTTEVSLRDSDVAA 123
                C   D    +++RN +       P++ +P+  + S      PT E       +  
Sbjct: 284 YLSSVCIVDDKNAKWQIRNLESTRHREWPMFQEPMLPIQSI-----PTIET------MPT 343

[Close]

BLAST of MC07g_new0192 vs. ExPASy TrEMBL
Match: A0A5A7UWF6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48829G00010 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.22e-18
Identity = 62/151 (41.06%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 18  FDHSVRSKARLHQA-----------LEQRRYAPKNKEKFLIEGLMFRVFCWSHDFRLRNG 77
           FDHS+RSKAR               L  R + P      ++    F V  +     L   
Sbjct: 93  FDHSLRSKARFSAGAFRAMVIQCMRLLGRLHPP------IVFFFFFAVSTFGIGLTLEGP 152

Query: 78  DPMHAPIWGDPIRLLSSSLSFASPTTEVS-------LRDSDVAAADMQTIEDGPRGEELE 137
             +   +   P+R+     SF   +  ++           +VAAADM+TI DGPRGEELE
Sbjct: 153 TKL---VSRPPLRIKLGKKSFLFSSARIADEKVMPVTNAKNVAAADMETIFDGPRGEELE 212

Query: 138 PDNNPQASVLQQPEYLAIGKSPSVNAAPNTG 150
           PD NPQAS+LQ+P YLAIGKSPSV AAPNTG
Sbjct: 213 PDKNPQASLLQEPTYLAIGKSPSVEAAPNTG 234

[Close]

BLAST of MC07g_new0192 vs. ExPASy TrEMBL
Match: A0A5D3BZC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84043G00010 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.63e-18
Identity = 62/151 (41.06%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 18  FDHSVRSKARLHQA-----------LEQRRYAPKNKEKFLIEGLMFRVFCWSHDFRLRNG 77
           FDHS+RSKAR               L  R + P      ++    F V  +     L   
Sbjct: 163 FDHSLRSKARFSAGAFRAMVIQCMRLLGRLHPP------IVFFFFFAVSTFGIGLTLEGP 222

Query: 78  DPMHAPIWGDPIRLLSSSLSFASPTTEVS-------LRDSDVAAADMQTIEDGPRGEELE 137
             +   +   P+R+     SF   +  ++           +VAAADM+TI DGPRGEELE
Sbjct: 223 TKL---VSRPPLRIKLGKKSFLFSSARIADEKVMPVTNAKNVAAADMETIFDGPRGEELE 282

Query: 138 PDNNPQASVLQQPEYLAIGKSPSVNAAPNTG 150
           PD NPQAS+LQ+P YLAIGKSPSV AAPNTG
Sbjct: 283 PDKNPQASLLQEPTYLAIGKSPSVEAAPNTG 304

[Close]

BLAST of MC07g_new0192 vs. ExPASy TrEMBL
Match: B9T8X7 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1985510 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.05e-16
Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 4   SGVRSKELAYQGGSFDHSVRSKARLHQALEQRRYAPKNKEKFLIEGLMFRV 54
           SGVRS+ELAYQG SFDHSVRSKARLHQALEQR+YA K  EKFLIEGLM RV
Sbjct: 67  SGVRSQELAYQGRSFDHSVRSKARLHQALEQRKYALK--EKFLIEGLMLRV 115

The following BLAST results are available for this feature:

BLAST of MC07g_new0192 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0192 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3452219.1	6.19e-19	86.79	hypothetical protein FNV43_RR08317 [Rhamnella rubrinervis]	[more]
EEF27683.1	7.26e-19	63.29	conserved hypothetical protein [Ricinus communis]	[more]
EEF30423.1	1.55e-18	44.68	conserved hypothetical protein [Ricinus communis]	[more]
KAA0059498.1	4.58e-18	41.06	hypothetical protein E6C27_scaffold48829G00010 [Cucumis melo var. makuwa]	[more]
TYK04334.1	1.37e-17	41.06	hypothetical protein E5676_scaffold84043G00010 [Cucumis melo var. makuwa]	[more]

BLAST of MC07g_new0192 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B9T8X8	3.51e-19	63.29	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1985520 PE=4 SV=1	[more]
B9T143	7.50e-19	44.68	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0439640 PE=4 SV=1	[more]
A0A5A7UWF6	2.22e-18	41.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BZC3	6.63e-18	41.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
B9T8X7	1.05e-16	86.27	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1985510 PE=4 SV=1	[more]

BLAST of MC07g_new0192 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g_new0192.1	MC07g_new0192.1	mRNA