MC07g_new0132 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g_new0132
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC07: 4636976 .. 4640058 (-)
RNA-Seq ExpressionMC07g_new0132
SyntenyMC07g_new0132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAGATACACACACCATAGCTTCGGTTTCAGCTTCGATTCAACGCTCAATGTTGCAGCAGATGGATCCTTGGTTAAAGAAGAAGAGGGTTTTGGATTTGAAATTGAAATTGGGGATCGTTGGTTCAGCGTCGTTTGGGCGTTCATGCCCATTACAATGACGAGCTTTTCGGTGGAAGTTGAACTTAACTACCAGATCTGTTCCATACCCATTCTGGTGGATGCGGCAACGAGCAAGATAAAAAGGGGAAGAACACGAACAGGTTGGATGAGGAGGGACGATAGAGAAGACCAAAAAAAAAAAAAGAAATTAGAAAAATAAGAATAATAAGTTACATCAACCCAAATTAATATAAAAACTAATAAAATAAATTTTGAAATATGCCAGTAATTGGAGTTCAAAAAAATCAAATTCAAATTTTATTCCAAATTCAAATCAAATTCAATCAAAACGAAAATCTTATTCGAGGCCATCAAATCAAAATTTGGGCGTATTCCAAATTCTACCTCCAATCAAAATTGGAATTAAGGATTAAGGTAAGAGCATACACTATACTAAATTCATGTTTTTATTATTTGACACATTAAAAATGTCACAGGTTTTATAAAATATCTCACAAGTTTCGATTCCAAATTATTTTCAAGATTTATAGATGTATACTCAGTGCATAAATTTCGAAAGAGACATTTTTTTAGTGGTAAATTTCAACCAATCACAAATTGTCACCTAATTATTTTAACTAATGACGTATTACATATTATTTTTCTAAATCAATTACAAATTAACACATGTCTCCCAATTAACAAATCGAATCAAAGTCACTTGTCTCTTTCACAAGACAATAACCTGATCTAATAAAATTATGCCACAACTCAAGTCTACTAAAGAAAATAAAATCAAACTAGATAAAGTACAAAATCCATAAAAAAGACTATATCAAGACCTTATTTGGTAGGAAATCTGCCAACATTATTTGTCCTTTCATCACTTTTGCAATACGTAAACGATATCATACTGCTGGAGCAAACTTATTCATTTACTATCCAGAAATGATTGACTTTGATATGACAGATTTAGCTATAAGATGACTGTGAAGACCTGGAATAATGCCTTAATTTGTCGATGATAAGGAAAAGTGAAAGGCGTATCTCTCAATTTGGGAGTAATATAATTTAGTTCAGCTCCAATTAAAGTTATACTTATGTATTAAAGAGCTTGTGACTTCCCTTTCTCTCCTCTAGAGCCAACAATGCCCCAAACGATTTCTATTGCATAATGATATATAATATTAGTGATTTTCTTACTATATGTGCACCTAAGACAAGATGATTAAGCATATATATTTTCTTATGCTTTCAAAAATATTATGACATGCTTGATCTCATTTGAAATTCACATATTTTCTTATCAACCTTTGAAAAGGATGACATTGTCGAATTAGGTTGGAAAAAATCTTCTAATGTAGGCTAGAATACCTCAGAGACTTCTCAACTCAGGTAAGTTATTAGGTCTTGACATTGACATTTATTAATGACGTCAATTTTGGACCGATCAATTTCAATTCCTTGATGTTTTACAATGAAACCAAGAAATTTTCCTGAATTTATACCAAATGCATGTTTTAGTGGCATTTATTTTTCTCACTCATAAGTCTCAACAATATTGAATCTCCGGTACTCAAGGTATCATTTATTTTTGTTTGCATAAAAAAATATTGATAAATAAATCTAATTTTTAAATTTTCTATGTACATTGTTGATTTTTTTCTTTATCAATTTTAAAGTTAAATTCAAAAGACAGTTTTCTTTTTAATTAGAAAGTTAAAATATACAATTGACAAGTAAGCTTCCAATTTATTTTAGATTTTTAGTTTTAGTTCTTCTGAAATTTATGTTTTAGTTCTTGAATATTATCGATTAATATTTATGTAGATTTAACTTGAAATTAATATGGTGAGATATTATAAAAGTAAAACAACAATGGAGTCATTAGAAGAAGAGTAATACTAATTCTGATAGGTCCAATATAGAAGATGGATATCCTAATTGGTTAGAATATAGTATTTCAAAGGATGTCACATTTTGTTTATGTTGCTACTTGTTCAAATCAGAAGTTGGTGAACAATTAGAAGGTGATCATTTTATTAGTGAAAGATATTCTAATTGCAAGAAAAAAAAAAAAGAAATTGCAAACTCATGTTCGTGGTCCTAATGGTGTACATAATCAAGCATAATGTGAGGCTGTTTTGAAACAATAGCAACATATTGAGACATTTTTAGTAGTATGTTAGACCAAGCATGAGTTGAATGTAGTTGCCAATTTTGCAAATAAATATTAATTTTTTTACTAATTTGCAAGTGCCCCTTATTTCTAAAAATTTAAAGTTTGTTTTGCAAGTCGTATAGAGATGCCAAAGTTTAGCAAAGAGGTTCATCACGATGGGAAGTTCATATGTGATCCTAATATGAGATAGAAGAATAGAAAGGTAGATTTAATCCATGATTTGACCTAGATATAAGGTCTTACTTTGAAGTAGTGGATATTGTGGAAAATCTTGGATATACTACCTAGAAGAAATTATGGGTAGGGATCCTACAAATGATGTTGGAGGATATCGTGTGCTAGAGAGTGATGGAGACGTTATGGAGTCGGCTGGACTTATAAACGATGGGATGAGTTTTGAACTATATGTGGAGCATGAGTCTTTTAATGATGATCATGATAACTTTTATGGAAATAGTGAGTATTTATGTAGTAATAAGGAATACAATGACTTAGTACTTGATTTGTGTGCCGAAAGATGTGTAGAAGGAAAAGTGAAAGAATGCAGTGGTCTTAACATGGAGAAAAGTTTAACAATTTATGAGGGTGATGATATAATAAAGTCTGATGTTGAAATACCTTCTAATGAAATTAAGTCATCGAAGAACTCATATGAATCAGATGACAATTGTAAGCTAAAGTACTCGTCATTTAAGAGAGGTGGAGATGATGAATCATTGATATTTGAGTTAAGCATATTATCTATATCATTGGATGAATTTAAAGATGCTGTAAATGATTATGTTGTGAAAGGATGA

mRNA sequence

ATGATGAGATACACACACCATAGCTTCGGTTTCAGCTTCGATTCAACGCTCAATGTTGCAGCAGATGGATCCTTGGTTAAAGAAGAAGAGGGTTTTGGATTTGAAATTGAAATTGGGGATCGTTGGTTCAGCGTCGTTTGGGCGTTCATGCCCATTACAATGACGAGCTTTTCGGTGGAAGTTGAACTTAACTACCAGATCTGTTCCATACCCATTCTGGTGGATGCGGCAACGAGCAAGATAAAAAGGGGAAGAACACGAACAGAAGAAATTATGGGTAGGGATCCTACAAATGATGTTGGAGGATATCGTGTGCTAGAGAGTGATGGAGACGTTATGGAGTCGGCTGGACTTATAAACGATGGGATGAGTTTTGAACTATATGTGGAGCATGAGTCTTTTAATGATGATCATGATAACTTTTATGGAAATAGTGAGTATTTATGTAGTAATAAGGAATACAATGACTTAGTACTTGATTTGTGTGCCGAAAGATGTGTAGAAGGAAAAGTGAAAGAATGCAGTGGTCTTAACATGGAGAAAAGTTTAACAATTTATGAGGGTGATGATATAATAAAGTCTGATGTTGAAATACCTTCTAATGAAATTAAGTCATCGAAGAACTCATATGAATCAGATGACAATTGTAAGCTAAAGTACTCGTCATTTAAGAGAGGTGGAGATGATGAATCATTGATATTTGAGTTAAGCATATTATCTATATCATTGGATGAATTTAAAGATGCTGTAAATGATTATGTTGTGAAAGGATGA

Coding sequence (CDS)

ATGATGAGATACACACACCATAGCTTCGGTTTCAGCTTCGATTCAACGCTCAATGTTGCAGCAGATGGATCCTTGGTTAAAGAAGAAGAGGGTTTTGGATTTGAAATTGAAATTGGGGATCGTTGGTTCAGCGTCGTTTGGGCGTTCATGCCCATTACAATGACGAGCTTTTCGGTGGAAGTTGAACTTAACTACCAGATCTGTTCCATACCCATTCTGGTGGATGCGGCAACGAGCAAGATAAAAAGGGGAAGAACACGAACAGAAGAAATTATGGGTAGGGATCCTACAAATGATGTTGGAGGATATCGTGTGCTAGAGAGTGATGGAGACGTTATGGAGTCGGCTGGACTTATAAACGATGGGATGAGTTTTGAACTATATGTGGAGCATGAGTCTTTTAATGATGATCATGATAACTTTTATGGAAATAGTGAGTATTTATGTAGTAATAAGGAATACAATGACTTAGTACTTGATTTGTGTGCCGAAAGATGTGTAGAAGGAAAAGTGAAAGAATGCAGTGGTCTTAACATGGAGAAAAGTTTAACAATTTATGAGGGTGATGATATAATAAAGTCTGATGTTGAAATACCTTCTAATGAAATTAAGTCATCGAAGAACTCATATGAATCAGATGACAATTGTAAGCTAAAGTACTCGTCATTTAAGAGAGGTGGAGATGATGAATCATTGATATTTGAGTTAAGCATATTATCTATATCATTGGATGAATTTAAAGATGCTGTAAATGATTATGTTGTGAAAGGATGA

Protein sequence

MMRYTHHSFGFSFDSTLNVAADGSLVKEEEGFGFEIEIGDRWFSVVWAFMPITMTSFSVEVELNYQICSIPILVDAATSKIKRGRTRTEEIMGRDPTNDVGGYRVLESDGDVMESAGLINDGMSFELYVEHESFNDDHDNFYGNSEYLCSNKEYNDLVLDLCAERCVEGKVKECSGLNMEKSLTIYEGDDIIKSDVEIPSNEIKSSKNSYESDDNCKLKYSSFKRGGDDESLIFELSILSISLDEFKDAVNDYVVKG
Homology
[Close]
BLAST of MC07g_new0132 vs. NCBI nr
Match: XP_022153708.1 (uncharacterized protein LOC111021158 [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 1.67e-18
Identity = 64/175 (36.57%), Postives = 103/175 (58.86%), Query Frame = 0 

Query: 90  EIMGRDPTNDVGGYRVLESDGDVMESAGLINDGMSFELYVEHES------FNDDHDNFYG 149
           ++ GRDPT +VGGYR++ESD DVME A L++DGM FE+YVEHE        ++D D    
Sbjct: 57  KLWGRDPTKEVGGYRLIESDKDVMELASLLSDGMKFEIYVEHECEDEAILLDNDSDALPY 116

Query: 150 NSEYLCSNKEYNDLVLDLCAERCVEGKVKECSGL-NMEKSLTIYEGDDIIKSDVEIPSNE 209
            S      ++ +DL+ ++  ++ VEG   + S +  ++ ++   +G        +I S+E
Sbjct: 117 ISGCESEFEDDDDLLSNIYIDKDVEGTASKPSEIIGIDDNVENNDGGS------DIDSSE 176

Query: 210 IKSSKNSYESDDNCKLKYSSFKRGGDDESLIFELSILSISLDEFKDAVNDYVVKG 257
           + S K+S +S+ + ++KY  ++    DE   FEL +   SL EFK+ V+DY VKG
Sbjct: 177 LLSLKDSSDSEVDVRIKYPVYRETTGDEKPXFELGMSFNSLREFKNVVDDYAVKG 225

[Close]
BLAST of MC07g_new0132 vs. ExPASy TrEMBL
Match: A0A6J1DI69 (uncharacterized protein LOC111021158 OS=Momordica charantia OX=3673 GN=LOC111021158 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.08e-19
Identity = 64/175 (36.57%), Postives = 103/175 (58.86%), Query Frame = 0 

Query: 90  EIMGRDPTNDVGGYRVLESDGDVMESAGLINDGMSFELYVEHES------FNDDHDNFYG 149
           ++ GRDPT +VGGYR++ESD DVME A L++DGM FE+YVEHE        ++D D    
Sbjct: 57  KLWGRDPTKEVGGYRLIESDKDVMELASLLSDGMKFEIYVEHECEDEAILLDNDSDALPY 116

Query: 150 NSEYLCSNKEYNDLVLDLCAERCVEGKVKECSGL-NMEKSLTIYEGDDIIKSDVEIPSNE 209
            S      ++ +DL+ ++  ++ VEG   + S +  ++ ++   +G        +I S+E
Sbjct: 117 ISGCESEFEDDDDLLSNIYIDKDVEGTASKPSEIIGIDDNVENNDGGS------DIDSSE 176

Query: 210 IKSSKNSYESDDNCKLKYSSFKRGGDDESLIFELSILSISLDEFKDAVNDYVVKG 257
           + S K+S +S+ + ++KY  ++    DE   FEL +   SL EFK+ V+DY VKG
Sbjct: 177 LLSLKDSSDSEVDVRIKYPVYRETTGDEKPXFELGMSFNSLREFKNVVDDYAVKG 225

The following BLAST results are available for this feature:
BLAST of MC07g_new0132 vs.
Match NameE-valueIdentityDescription
BLAST of MC07g_new0132 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153708.11.67e-1836.57uncharacterized protein LOC111021158 [Momordica charantia][more]
BLAST of MC07g_new0132 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DI698.08e-1936.57uncharacterized protein LOC111021158 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
BLAST of MC07g_new0132 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g_new0132.1MC07g_new0132.1mRNA