MC07g_new0127 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0127
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC07: 4501790 .. 4502097 (+)
RNA-Seq Expression	MC07g_new0127
Synteny	MC07g_new0127

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGCTCGTCACAGCAATCATATCCGAGGCGAAGAAATTGTCTGGAATCCCCCTCGGCCTAGTCGTTGCGCAGCGGTCCGTTTCTCGGCTTCACTTTGGAATAGGGGTGATTTGCAGAAATGAGGAAGGCCAAATACTTGCTGCAATGTCAAACAATACAGGAGTGTACTACAACCTTTAATTGTGGAATTGTTGGCAATTCTTGAATGTCTGAGGCTTGCCGATGGTTTGAACATGCCTTCCATTCGAATTGAATTAGATTCTCTTCAAGCAATTGAGCTAATTAATCAAAGGGGAATATGA

mRNA sequence

ATGGCTCTGCTCGTCACAGCAATCATATCCGAGGCGAAGAAATTGTCTGGAATCCCCCTCGGCCTAGTCGTTGCGCAGCGGAGTGTACTACAACCTTTAATTGTGGAATTGTTGGCAATTCTTGAATGTCTGAGGCTTGCCGATGGTTTGAACATGCCTTCCATTCGAATTGAATTAGATTCTCTTCAAGCAATTGAGCTAATTAATCAAAGGGGAATATGA

Coding sequence (CDS)

ATGGCTCTGCTCGTCACAGCAATCATATCCGAGGCGAAGAAATTGTCTGGAATCCCCCTCGGCCTAGTCGTTGCGCAGCGGAGTGTACTACAACCTTTAATTGTGGAATTGTTGGCAATTCTTGAATGTCTGAGGCTTGCCGATGGTTTGAACATGCCTTCCATTCGAATTGAATTAGATTCTCTTCAAGCAATTGAGCTAATTAATCAAAGGGGAATATGA

Protein sequence

MALLVTAIISEAKKLSGIPLGLVVAQRSVLQPLIVELLAILECLRLADGLNMPSIRIELDSLQAIELINQRGI

Homology

The following BLAST results are available for this feature:

BLAST of MC07g_new0127 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0127 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0127 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0127 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 28..71 e-value: 4.1E-5 score: 23.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g_new0127.1	MC07g_new0127.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity