MC07g_new0086 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g_new0086
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
LocationMC07: 3007883 .. 3008223 (+)
RNA-Seq ExpressionMC07g_new0086
SyntenyMC07g_new0086
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGTCCAATTGTTTTTCCTGGACTAATAACAGAGTTATGTTTGCAAGCAGAGGTGGAGACTGATGATGAGGTTGTAGTGACACTTAAGAGTACGTCACATCCATAAGGAGAGTTCGAGGATACTCGTTTGTTCGTGAGGAAGATTCTCCCACTATCGCTGCAGATCCCAAGACCCATAGTGTGGTTGCTAGAGAACAATACAATGAGTTAAGTCGCAAATATGATCTTGTCTTGGCTACTCAACATGCCACGTGTGAGTTTCTCATGGAGCTTTATAGAGATGGTGCACCTTCTCTCCCCGACGAGCTCAAGGCCGACTTGCCTTCTTCTTCATGA

mRNA sequence

ATGGTAGGTCCAATTGTTTTTCCTGGACTAATAACAGAGTTATGTTTGCAAGCAGAGGTGGAGACTGATGATGAGGTTGTAGTGACACTTAAGAATCCCAAGACCCATAGTGTGGTTGCTAGAGAACAATACAATGAGTTAAGTCGCAAATATGATCTTGTCTTGGCTACTCAACATGCCACGTGTGAGTTTCTCATGGAGCTTTATAGAGATGGTGCACCTTCTCTCCCCGACGAGCTCAAGGCCGACTTGCCTTCTTCTTCATGA

Coding sequence (CDS)

ATGGTAGGTCCAATTGTTTTTCCTGGACTAATAACAGAGTTATGTTTGCAAGCAGAGGTGGAGACTGATGATGAGGTTGTAGTGACACTTAAGAATCCCAAGACCCATAGTGTGGTTGCTAGAGAACAATACAATGAGTTAAGTCGCAAATATGATCTTGTCTTGGCTACTCAACATGCCACGTGTGAGTTTCTCATGGAGCTTTATAGAGATGGTGCACCTTCTCTCCCCGACGAGCTCAAGGCCGACTTGCCTTCTTCTTCATGA

Protein sequence

MVGPIVFPGLITELCLQAEVETDDEVVVTLKNPKTHSVVAREQYNELSRKYDLVLATQHATCEFLMELYRDGAPSLPDELKADLPSSS
Homology
BLAST of MC07g_new0086 vs. NCBI nr
Match: XP_022159289.1 (uncharacterized protein LOC111025702 [Momordica charantia])

HSP 1 Score: 102 bits (255), Expect = 2.86e-25
Identity = 61/116 (52.59%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 1   MVGPIVFPGLITELCLQAEVETDDEVVV-------------------------TLKNPKT 60
           MVGP++FP  I ELCL+A VE D E VV                         T  +P T
Sbjct: 53  MVGPLIFPARIMELCLKAGVEADVEDVVMSKKSATSIRRVRGYLIVREEDSPITAADPDT 112

Query: 61  HSVVAREQYNE---LSRKYDLVLATQHATCEFLMELYRDGAPSLPDELKADLPSSS 88
             VV REQY+E   L   YDL+ ATQHATCEFL +LY DGAPSLPDEL ADLPSSS
Sbjct: 113 RGVVTREQYDEYEKLRHVYDLLFATQHATCEFLKKLYGDGAPSLPDELAADLPSSS 168

BLAST of MC07g_new0086 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 82.0 bits (201), Expect = 8.45e-16
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0

Query: 23   DDEVVVTLKNPKTHSVVAREQYNELSRKYDLVLATQHATCEFLMELYRDGAPSLPDELKA 82
            +++  +T  +P+T  VV REQY+EL  KY+L+L TQ ATC FL ++Y D APS PDEL A
Sbjct: 1317 EEDSPITAADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSFPDELAA 1376

Query: 83   DLPSSS 88
            DLPSSS
Sbjct: 1377 DLPSSS 1382

BLAST of MC07g_new0086 vs. ExPASy TrEMBL
Match: A0A6J1E204 (uncharacterized protein LOC111025702 OS=Momordica charantia OX=3673 GN=LOC111025702 PE=4 SV=1)

HSP 1 Score: 102 bits (255), Expect = 1.39e-25
Identity = 61/116 (52.59%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 1   MVGPIVFPGLITELCLQAEVETDDEVVV-------------------------TLKNPKT 60
           MVGP++FP  I ELCL+A VE D E VV                         T  +P T
Sbjct: 53  MVGPLIFPARIMELCLKAGVEADVEDVVMSKKSATSIRRVRGYLIVREEDSPITAADPDT 112

Query: 61  HSVVAREQYNE---LSRKYDLVLATQHATCEFLMELYRDGAPSLPDELKADLPSSS 88
             VV REQY+E   L   YDL+ ATQHATCEFL +LY DGAPSLPDEL ADLPSSS
Sbjct: 113 RGVVTREQYDEYEKLRHVYDLLFATQHATCEFLKKLYGDGAPSLPDELAADLPSSS 168

BLAST of MC07g_new0086 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.09e-16
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0

Query: 23   DDEVVVTLKNPKTHSVVAREQYNELSRKYDLVLATQHATCEFLMELYRDGAPSLPDELKA 82
            +++  +T  +P+T  VV REQY+EL  KY+L+L TQ ATC FL ++Y D APS PDEL A
Sbjct: 1317 EEDSPITAADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSFPDELAA 1376

Query: 83   DLPSSS 88
            DLPSSS
Sbjct: 1377 DLPSSS 1382

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022159289.12.86e-2552.59uncharacterized protein LOC111025702 [Momordica charantia][more]
XP_022154847.18.45e-1657.58LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1E2041.39e-2552.59uncharacterized protein LOC111025702 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DMT34.09e-1657.58LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g_new0086.1MC07g_new0086.1mRNA