MC07g_new0076 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g_new0076
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC07: 2814943 .. 2815613 (+)
RNA-Seq ExpressionMC07g_new0076
SyntenyMC07g_new0076
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGGGAAGCCAAATCTCTACATCAACAATTGTCGACGTTTGTGGAGACGACTAGAGATTTCAGACTTATAGACATGAGTTCGGGAAGAAGTTCACAATATTCTGATGAAGAACGCCACCCTAGGAGGAAAGTTAAAAGGGATGCACCTCCACCCGAGACAGCCGAAGGAGAAATTGACCAACCAGTTCTCGGGCAGGGGAATGCCACCGACCAGTTCTTAGGGATACCGGTCGACTAGTTCTCGGACAGAGAGATAAATTGGTCAAAATTCTGGTTCAACAAGATGACAAATTGGCCGCCCTGGAAAAGAAGGTCGAGGGAATGCACCGAAACATATCCCTGCTTCTACAGAAACTCGAGCAACATGAAGTGGAACAACTTGCGCTTGTTTGCGATCCACGAAAGAATAAAGCCTCGATGATTGAAGGAGTTGGGGAGACAACCAACCAGGCACGAAGCAAATTGAAGAAGTTTGATCTCGAGGAACTGGTAGAGCAAGCAGAGTCGCCATTTACGGAGAAAATAATGAAAGGAAAAGTTTCTCTGAAGTTCAAGCCGCCTACCATTGCACAATACGACAGCTAAACAGATCCATCGATCACCTCGACACATATAGGGAATGGGCAGATATTTATGGCATAACGGAAGCCATTAGATGCGGAGTGTTCTC

mRNA sequence

ATGCACCGAAACATATCCCTGCTTCTACAGAAACTCGAGCAACATGAAGTGGAACAACTTGCGCTTGTTTGCGATCCACGAAAGAATAAAGCCTCGATGATTGAAGGAGTTGGGGAGACAACCAACCAGGCACGAAGCAAATTGAAGAAGTTTGATCTCGAGGAACTGGTAGAGCAAGCAGAGTCGCCATTTACGGAGAAAATAATGAAAGGAAAAGTTTCTCTGAAGTTCAAGCCGCCTACCATTGCACAATACGACAGCTAA

Coding sequence (CDS)

ATGCACCGAAACATATCCCTGCTTCTACAGAAACTCGAGCAACATGAAGTGGAACAACTTGCGCTTGTTTGCGATCCACGAAAGAATAAAGCCTCGATGATTGAAGGAGTTGGGGAGACAACCAACCAGGCACGAAGCAAATTGAAGAAGTTTGATCTCGAGGAACTGGTAGAGCAAGCAGAGTCGCCATTTACGGAGAAAATAATGAAAGGAAAAGTTTCTCTGAAGTTCAAGCCGCCTACCATTGCACAATACGACAGCTAA

Protein sequence

MHRNISLLLQKLEQHEVEQLALVCDPRKNKASMIEGVGETTNQARSKLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQYDS
Homology
BLAST of MC07g_new0076 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 52.4 bits (124), Expect = 2.13e-05
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 47  KLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQYD 86
           K K FDLEEL++QA+SPFTE+IM+ KV  KFK PT+ Q+D
Sbjct: 163 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFD 202

BLAST of MC07g_new0076 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 50.8 bits (120), Expect = 6.70e-05
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0

Query: 29  NKASMIEGVGETTNQARSKLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQYD 86
           NK   I+    +  +   K K FDLEEL+ QA+SPFTE+IM+ KV  KFK PT+  +D
Sbjct: 50  NKGKPIDRPESSEKRHNQKEKGFDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFD 107

BLAST of MC07g_new0076 vs. NCBI nr
Match: XP_022155816.1 (protein SPIRRIG [Momordica charantia])

HSP 1 Score: 49.7 bits (117), Expect = 1.99e-04
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0

Query: 43  QARSKLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQYD 86
           Q   K K FDLEEL++QA+SPF E+IM  KV  KFK PT+ Q+D
Sbjct: 101 QQSKKEKGFDLEELLDQADSPFIEEIMGEKVPPKFKLPTVKQFD 144

BLAST of MC07g_new0076 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 48.9 bits (115), Expect = 2.54e-04
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 0

Query: 47  KLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQ 84
           K K FDLEEL++QA+SPFTE+IM+ KV  KFK PT+ Q
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 218

BLAST of MC07g_new0076 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.03e-05
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 47  KLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQYD 86
           K K FDLEEL++QA+SPFTE+IM+ KV  KFK PT+ Q+D
Sbjct: 163 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFD 202

BLAST of MC07g_new0076 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.25e-05
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0

Query: 29  NKASMIEGVGETTNQARSKLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQYD 86
           NK   I+    +  +   K K FDLEEL+ QA+SPFTE+IM+ KV  KFK PT+  +D
Sbjct: 50  NKGKPIDRPESSEKRHNQKEKGFDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFD 107

BLAST of MC07g_new0076 vs. ExPASy TrEMBL
Match: A0A6J1DSV3 (protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 9.64e-05
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0

Query: 43  QARSKLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQYD 86
           Q   K K FDLEEL++QA+SPF E+IM  KV  KFK PT+ Q+D
Sbjct: 101 QQSKKEKGFDLEELLDQADSPFIEEIMGEKVPPKFKLPTVKQFD 144

BLAST of MC07g_new0076 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.23e-04
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 0

Query: 47  KLKKFDLEELVEQAESPFTEKIMKGKVSLKFKPPTIAQ 84
           K K FDLEEL++QA+SPFTE+IM+ KV  KFK PT+ Q
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 218

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022158830.12.13e-0565.00uncharacterized protein LOC111025293 [Momordica charantia][more]
XP_022159109.16.70e-0548.28uncharacterized protein LOC111025548 [Momordica charantia][more]
XP_022155816.11.99e-0459.09protein SPIRRIG [Momordica charantia][more]
XP_022145129.12.54e-0465.79uncharacterized protein LOC111014646 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1DWY01.03e-0565.00uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1E1E73.25e-0548.28uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DSV39.64e-0559.09protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1[more]
A0A6J1CUA71.23e-0465.79uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g_new0076.1MC07g_new0076.1mRNA