MC07g_new0039 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g_new0039
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC07: 1509684 .. 1513378 (-)
RNA-Seq ExpressionMC07g_new0039
SyntenyMC07g_new0039
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTCCTTCCAAGTAATATGGCCGGGCTAAGATGCCTACGGTGGAGGCGTGCGCACGACACTAGGTATGGCACGAAGGTGTGTAGAGTAGTAGGCCGCCATGGTGGCGTGCGCTTCATGCTCTAGCAAAGGTGGCTGTGGTGACCACAAAGGAGAAGGGGGCACCACGACCGCTTGGGTAGCGCTCGCTTTGCTCGGGAAGGATTGCACGAAGGTCGTGCTTCTCGCATTGAAAAAGGTGCACTGCGGACAATTGGGGTGCACTCGTTTGGTGCTGAGAAGGATTGTACGGCCTTGGTGGTGGCACGTGCTAGGCGTGTGAGTATTGGGCTGATGGGCCGCTGTGGCGGTGTGTTTGCCACGCTGGGAGTGCATGGAATGGGTCGATGGACCGTGGTGGTACCTGCCCGTGTAAGACTTTTTCATAACATCCTAACAGTGGCCCCCCATTTCTGATCTGAAAGCTTTAGCACTTTTGTTCAGGAGTGTACTTAGAGAAAGAAATGAGTGGGGGCGGGCATGGTGGCTGTACAATTTTTCTTTTTTTTTAATGCCACGTTTCAACCATGTAGGGGGTGGTAAAATTTAAATTTCAAAACCCATCATTGAGCTTTGATTTTCCACCCTCCTTTAATTACCTCTGATTTGACCTCCTTTAATTACCTTTGATTGAAAACGTGTTTTCCTCCTCCCACTCTCTTTTTCTTCTTCTTCTTTTATTTTATTTTATTTTATTTTTTATTTTAAATTTTTACCTGCACCTTCATCCTTCTTCTTCGTTTAGTTTTTACATTTTGTTCTCCTTCCCTCTCCCCTTTTTTTTCTTATTGCTACTTCTGTTTTGCATCTTTGACATTATTATTGGACACTCAGATTTCAAAGGTATTTTTACATATTTCCTCATCTTCGCCTTTGCTTTCGCTCATTATTCTAGTAAGTTATTGACGTTCTTTTTCTTTTTCTTTCCCATCCCTTTATTTTGAGTTTTTAATTTGTTTTCGCGGACATGTCGAGCTCCGACAACACTTAACGGTTGAGTCCCTTAGATTCGTTTATGGAGACATGGGTGGCTTCAAATGGTTCTGAACAAGCCTCTGCATTGCGTTCTTCCCCGAAGGCGAGCACCTTGGGTAGGTCAGAAAGGGTGCAGCACGCTACCCCACTCGAATGATTTTTCCAGATGACGAGGGTGTACAGTCCTCCATTACTCGGAAAGACCTTGCTGTACTTCGAGATATGTATGAGATTCCTTCTACTATACATCTTCAAGTGCCTAACAAAGGGGAATGAATGACATGTCCGCCACGAGGGGAAGTAGCATTTTACAAAAAAAAATGTTCGATTGTGGTGTAAGACTACCTTTACCTTTACCTTCCTTTATTCAGTGTTTCTTAAGTTCTTTCCATCTGGCCCTGGCACAACTGGTGTCAAATGGATGAGCCACCCTTCTTGGATGTTACGTGGCATGGAGGCAAGTGGGCGGGGGTTCCGTGCTTCACCCGGGGGTTATCGCCAATTTTTTTGAACTAAAAGCTACTCTACTAAGAAAGAATTTGTTTTTCTACATGTCGAAACATGATGGGGCGTAGTCAACCGAACCTGTGGATAGTGTTTTAAACGTGGCTGCACTGGATATCTCAGCACGGCCGCGACGGTTGCCCTAACACCTTCATCCGAATCAGGCAGGGCAACTGTAGCATCCGCATTACCCAGCAGCAGTGCGTCTGGCGTGAGTGCGGTGGTTTTTGACCAATCTGACCAGGAAAGAAGGGTGAGCTCTAGAAGCGCTCGTGAGATTCCATCGACCCAATGTCCTAGCTCGAAGAGATGGAAGGATAAATGGTTTTTTGTCCGTGGTGACTATTTGGCCCCAGTGTCAGCTGATTGCTGTTCATTTGTTTTCCCGATCGAGTTCGGACAATCGGGTCAGTGATTCTTTACTGTTCCAATTTGTTAGCTCGACCGATTATTGTTATTACTATATATATATTATATATATATATATATATATTATATATATATATATATATCTACTTTATTTTTTTTGTGGGTAATGAGGGTTCAGTCGACCTTGGGTGATGATGATGAGTTATTAAGGAACACGTTAGAGTTGCTGTCCGTAAATGATTCAGGCGACGTTTCTTTGATCGTGGAGTGATATTTGAGACTGTACTGACTATCCCATCTTAGCTATCCTATTCTAGACTCAGAGGCGAGGAAACTCGTGGGCGAAAGGATTAGTTGTGAGGACCTAATTCGTTTAGGTATAACATTTTTGCTTCCCTATTTGGCTTTATCGCCCCAGTTGTGCATTTGGTGTAATCGTTTCTTTTTTTTTTTTTTTTGCGTGTGCATACTCTGAAGTCATGCCACCCACCACCTCTTTTGTTGATTGCCTTGTTGCCCAAGCAGCGAAGCGAGTGACTTCTCAGGCTACTGACCAAGGCGGCTCCTTTAGGGCACAGGAGGTACCTCCTCGCCAACGTCGTCGTATCGGAGGCTCCTCCCAAGGAGAAATTGTGTCGGCAACTTCACTTCGGCCTCCTCCTCCTATTAGCCTGCCACGACCCTCGGCAACGTCCCTAGTAGGGGCGTCGCCCAGTACTATTCACCGATGGATATCCCCTTTCCTACGTACGGATTCCGTGGACCATATATGACTTCCTTCCCTTCTAGAGCAGTGAATTCAATGGGAAGGAAGATGTGAGAGAGGATGGGTTGCTTGAATGTAATGGAGGATTTTGCTGCATAAGACCCCAAACGTGAATTTAATCAAGCTCTATTTGATCTTCAAAGGGTATGGTCATTGCTTTGGATTTTTTATTTTTCATCTTGCCCTTAATACGATTATGGATGGGTTGGTCATTATTTTTCAGTTATGGACGCTTATTCCGGGTATAATTAACCAAATAAGAATCTACGACCCAGATCAAGAAAAAACCTCGTTCCTCACGGAGCAAGGACTATACTATTACCAGGTGATGTCTTTTGGTTTAAAAATGCTGGAGTCACTTACCAAAGAATGGTCAACAAAATATTTGCACCATTGGAAAAAAGATGGAAGTATATGTCGATGACATGTTAGTAAAAAGCAGACATGTGACCCGACACGAAGGCGACTTGGCCGAAGCCTTCGATATCCTGCAGCAGTATCATATGAAGTTAAACCCGAACATGGGTGAAACGTGGCACTAAAAAAAAGGAAAAATTGTATAGCCACCATGCCCGCCCCGCTCCTTTCTTTCTCTAAGTACACTCCTGAATGAAAGTCCTAAAGCTTTCAGATCAGGAGTGGGGGGCCACTTTTGGGATGTTATAAAAAGCCTTACACGGGTAGGTACCACCACGGTCCACCCATTCCATGCACTCCCAATGTGACAAACACACCGCCACAGCAGCCCATCAGCCCAATACTTACACGCCCAACACGTGCCAGCCTCACAATCCTTCTTTTTGCCCAACGAGCACATCCCAATTGGCCGCGATGCCCCTTTCTCAACACAAGAGCACGACCTCCGCGCAATCCCTTCTCCGAGCAAAGCGAGCGCGACCCAAGCGGCCGCGATGCCCCTTCTCCTTTATGGTCACCGCAGTTACCTTTGCTAGAGCATGAAGCGCACGCCACCATGATAGTCTACTACTCTACGTACCTTTGTGCCATACCTAGCGTGGTGCGCACACCTCTACCGTAG

mRNA sequence

ATGTATTTCCTTCCAAGTAATATGGCCGGGCTAAGATGCCTACGGTGGAGGCGTGCGCACGACACTAGGAGAAGGGGGCACCACGACCGCTTGGGTAGCGCTCGCTTTGCTCGGGAAGGATTGCACGAAGGTCGTGCTTCTCGCATTGAAAAAGGTGCACTGCGGACAATTGGGGTGCACTCGTTTGGTGCTGAGAAGGATTGTACGGCCTTGGTGGTGGCACGTGCTAGGCGTGTGAGTATTGGGCTGATGGGCCGCTGTGGCGGTGTGTTTGCCACGCTGGGAGTGCATGGAATGGGTCGATGGACCGTGGTGGTACCTGCCCGTGTCAGAAAGGGTGCAGCACGCTACCCCACTCGAATGATTTTTCCAGATGACGAGGGTGTACAGTCCTCCATTACTCGGAAAGACCTTGCTGTACTTCGAGATATCACGGCCGCGACGGTTGCCCTAACACCTTCATCCGAATCAGGCAGGGCAACTGTAGCATCCGCATTACCCAGCAGCAGTGCGTCTGGCGTGAGTGCGGTGGTTTTTGACCAATCTGACCAGGAAAGAAGGGTGAGCTCTAGAAGCGCTCGTGAGATTCCATCGACCCAATGTCCTAGCTCGAAGAGATGGAAGGATAAATGGTTTTTTGTCCGTGGTGACTATTTGGCCCCAGTGTCAGCTGATTGCTGTTCATTTGTTTTCCCGATCGAGTTCGGACAATCGGACTCAGAGGCGAGGAAACTCGTGGGCGAAAGGATTAGTTGTGAGGACCTAATTCGTTTAGTCATGCCACCCACCACCTCTTTTGTTGATTGCCTTGTTGCCCAAGCAGCGAAGCGAGTGACTTCTCAGGCTACTGACCAAGGCGGCTCCTTTAGGGCACAGGAGCCTGCCACGACCCTCGGCAACGTCCCTAGTAGGGGCGTCGCCCAGTACTATTCACCGATGGATATCCCCTTTCCTACGTACGGATTCCGTGGACCATATATGACTTCCTTCCCTTCTAGAGCAGTGAATTCAATGGGAAGGAAGATGTACCACCACGGTCCACCCATTCCATGCACTCCCAATGTGACAAACACACCGCCACAGCAGCCCATCAGCCCAATACTTACACGCCCAACACGTGCCAGCCTCACAATCCTTCTTTTTGCCCAACGAGCACATCCCAATTGGCCGCGATGCCCCTTTCTCAACACAAGAGCACGACCTCCGCGCAATCCCTTCTCCGAGCAAAGCGAGCGCGACCCAAGCGGCCGCGATGCCCCTTCTCCTTTATGGTCACCGCAGTTACCTTTGCTAGAGCATGAAGCGCACGCCACCATGATAGTCTACTACTCTACGTACCTTTGTGCCATACCTAGCGTGGTGCGCACACCTCTACCGTAG

Coding sequence (CDS)

ATGTATTTCCTTCCAAGTAATATGGCCGGGCTAAGATGCCTACGGTGGAGGCGTGCGCACGACACTAGGAGAAGGGGGCACCACGACCGCTTGGGTAGCGCTCGCTTTGCTCGGGAAGGATTGCACGAAGGTCGTGCTTCTCGCATTGAAAAAGGTGCACTGCGGACAATTGGGGTGCACTCGTTTGGTGCTGAGAAGGATTGTACGGCCTTGGTGGTGGCACGTGCTAGGCGTGTGAGTATTGGGCTGATGGGCCGCTGTGGCGGTGTGTTTGCCACGCTGGGAGTGCATGGAATGGGTCGATGGACCGTGGTGGTACCTGCCCGTGTCAGAAAGGGTGCAGCACGCTACCCCACTCGAATGATTTTTCCAGATGACGAGGGTGTACAGTCCTCCATTACTCGGAAAGACCTTGCTGTACTTCGAGATATCACGGCCGCGACGGTTGCCCTAACACCTTCATCCGAATCAGGCAGGGCAACTGTAGCATCCGCATTACCCAGCAGCAGTGCGTCTGGCGTGAGTGCGGTGGTTTTTGACCAATCTGACCAGGAAAGAAGGGTGAGCTCTAGAAGCGCTCGTGAGATTCCATCGACCCAATGTCCTAGCTCGAAGAGATGGAAGGATAAATGGTTTTTTGTCCGTGGTGACTATTTGGCCCCAGTGTCAGCTGATTGCTGTTCATTTGTTTTCCCGATCGAGTTCGGACAATCGGACTCAGAGGCGAGGAAACTCGTGGGCGAAAGGATTAGTTGTGAGGACCTAATTCGTTTAGTCATGCCACCCACCACCTCTTTTGTTGATTGCCTTGTTGCCCAAGCAGCGAAGCGAGTGACTTCTCAGGCTACTGACCAAGGCGGCTCCTTTAGGGCACAGGAGCCTGCCACGACCCTCGGCAACGTCCCTAGTAGGGGCGTCGCCCAGTACTATTCACCGATGGATATCCCCTTTCCTACGTACGGATTCCGTGGACCATATATGACTTCCTTCCCTTCTAGAGCAGTGAATTCAATGGGAAGGAAGATGTACCACCACGGTCCACCCATTCCATGCACTCCCAATGTGACAAACACACCGCCACAGCAGCCCATCAGCCCAATACTTACACGCCCAACACGTGCCAGCCTCACAATCCTTCTTTTTGCCCAACGAGCACATCCCAATTGGCCGCGATGCCCCTTTCTCAACACAAGAGCACGACCTCCGCGCAATCCCTTCTCCGAGCAAAGCGAGCGCGACCCAAGCGGCCGCGATGCCCCTTCTCCTTTATGGTCACCGCAGTTACCTTTGCTAGAGCATGAAGCGCACGCCACCATGATAGTCTACTACTCTACGTACCTTTGTGCCATACCTAGCGTGGTGCGCACACCTCTACCGTAG

Protein sequence

MYFLPSNMAGLRCLRWRRAHDTRRRGHHDRLGSARFAREGLHEGRASRIEKGALRTIGVHSFGAEKDCTALVVARARRVSIGLMGRCGGVFATLGVHGMGRWTVVVPARVRKGAARYPTRMIFPDDEGVQSSITRKDLAVLRDITAATVALTPSSESGRATVASALPSSSASGVSAVVFDQSDQERRVSSRSAREIPSTQCPSSKRWKDKWFFVRGDYLAPVSADCCSFVFPIEFGQSDSEARKLVGERISCEDLIRLVMPPTTSFVDCLVAQAAKRVTSQATDQGGSFRAQEPATTLGNVPSRGVAQYYSPMDIPFPTYGFRGPYMTSFPSRAVNSMGRKMYHHGPPIPCTPNVTNTPPQQPISPILTRPTRASLTILLFAQRAHPNWPRCPFLNTRARPPRNPFSEQSERDPSGRDAPSPLWSPQLPLLEHEAHATMIVYYSTYLCAIPSVVRTPLP
Homology
BLAST of MC07g_new0039 vs. ExPASy TrEMBL
Match: A0A6J1CEH1 (uncharacterized protein LOC111010939 OS=Momordica charantia OX=3673 GN=LOC111010939 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 9.47e-04
Identity = 40/125 (32.00%), Postives = 54/125 (43.20%), Query Frame = 0

Query: 262 PTTSFVDCLVAQAAKRVTSQATDQGG------------------------------SFRA 321
           P+TSF+D L AQAAKR TS   +Q G                              +F A
Sbjct: 2   PSTSFIDRLRAQAAKRATSHCAEQDGCSGTADLPPHQRRRTGDSSQEYLPLPFDPQAFPA 61

Query: 322 QEP---ATTLGNVPSR--------GVAQYYSPMDIPFPTYGFRGPYMTSFPSRAVNSMGR 345
             P   +T+  + PS            + Y+  D+P P +GF GPYM   P R VN MGR
Sbjct: 62  VRPPPLSTSSQSRPSMVPLAGASPNTPRRYTFRDVPSPAFGFPGPYMAPSPPRVVNKMGR 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CEH19.47e-0432.00uncharacterized protein LOC111010939 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..423

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g_new0039.1MC07g_new0039.1mRNA