MC07g_new0016 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g_new0016
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC07: 805555 .. 806619 (-)
RNA-Seq ExpressionMC07g_new0016
SyntenyMC07g_new0016
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACTTTTGCAGGAATGTAATTTCGACATCATCTACAACAATATGTCGCTATTCTCCGACTATCGGAGAGCCATTGGAGGCTTGTCGGAAGTTCCATCTATAAATAGATACATCCCACCTCATTCTTGGGTACGTGAAATTATATTATTTCTCGAGTATAGATCAGTTAGTTGTTGTGTAAAATGCAGTCAACTAATCTCAATCACAAATGCAGACAATATTTGTTAGCTAATCCCAAATTAGGTTTTAGTTCCAATTAATGCGAAATTCAATTTTGAAATTGGAACTTACAACTTAAAAGATTAGATAAAATAGTCTAAAACTTCTAAGTAACAAGAACGATACAGATAGAGAGAACAAAATTAAACTCTGAATTTATATTGGTTCATCTAATGTGGGCTACGTTCAGTTCTCTACTACCATTGCAGGTTCTACCAAAATGTCACGAAGAATCTTCCAAAAGTTTACAAGGTATTTACAATGATTTCTCCCAGTTTTCCCTCCCACATAAAACACTCACAAATCACTCTACAAGTCTTTCAAACTCTCGAACGAATACACAAGTATTTAGCTCTCAAACTCTCTTTTCTTGAAGAATTTCTCAAGACTCCCTATTTGTGCACATCAATCAAATGACCTATTTTTCTTTAAGTAAGAGATTGGTCATCGCCCAAAGGTGGCTCATTGAGCCGGTCATCAGTTGCTAAGAGCCTTTCCTCACTTTAGAAGAAAAGCCACTTTCTTTTCTTATTAGTAAGGGGACAAATATTAGTTGTATATCTATATTGGACTTTCGATTTTGCGTTGTTTTTTTTCAGTATATATAATCCAATGTTCAGTGAGATGACTTTCCTACTGACGGAATCGCTTGAATTAGTTGAAGGAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTTTTGACAGCGAGGGAGGTATGGGTGCGTCTGCTGGTATCGTATATAAGAGAAAGGCTGCATTTAGGAGTGATCTTTCCCTCTTCTTCAAGCCAGTGGTGATCTCACTTTCGAAAGAGAGTCTCGACGTGCTTAGTAGCGCGTAA

mRNA sequence

ATGACACTTTTGCAGGAATGTAATTTCGACATCATCTACAACAATATGTCGCTATTCTCCGACTATCGGAGAGCCATTGGAGGCTTGTCGGAAGTTCCATCTATAAATAGATACATCCCACCTCATTCTTGGTTCTCTACTACCATTGCAGGTTCTACCAAAATGTCACGAAGAATCTTCCAAAAGTTTACAAGTATATATAATCCAATGTTCAGTGAGATGACTTTCCTACTGACGGAATCGCTTGAATTAGTTGAAGGAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTTTTGACAGCGAGGGAGGTATGGGTGCGTCTGCTGGTATCGTATATAAGAGAAAGGCTGCATTTAGGAGTGATCTTTCCCTCTTCTTCAAGCCAGTGGTGATCTCACTTTCGAAAGAGAGTCTCGACGTGCTTAGTAGCGCGTAA

Coding sequence (CDS)

ATGACACTTTTGCAGGAATGTAATTTCGACATCATCTACAACAATATGTCGCTATTCTCCGACTATCGGAGAGCCATTGGAGGCTTGTCGGAAGTTCCATCTATAAATAGATACATCCCACCTCATTCTTGGTTCTCTACTACCATTGCAGGTTCTACCAAAATGTCACGAAGAATCTTCCAAAAGTTTACAAGTATATATAATCCAATGTTCAGTGAGATGACTTTCCTACTGACGGAATCGCTTGAATTAGTTGAAGGAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTTTTGACAGCGAGGGAGGTATGGGTGCGTCTGCTGGTATCGTATATAAGAGAAAGGCTGCATTTAGGAGTGATCTTTCCCTCTTCTTCAAGCCAGTGGTGATCTCACTTTCGAAAGAGAGTCTCGACGTGCTTAGTAGCGCGTAA

Protein sequence

MTLLQECNFDIIYNNMSLFSDYRRAIGGLSEVPSINRYIPPHSWFSTTIAGSTKMSRRIFQKFTSIYNPMFSEMTFLLTESLELVEGKEVAGLTGEESFDSEGGMGASAGIVYKRKAAFRSDLSLFFKPVVISLSKESLDVLSSA
Homology
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BLAST of MC07g_new0016 vs. NCBI nr
Match: KAF3452252.1 (hypothetical protein FNV43_RR08350 [Rhamnella rubrinervis])

HSP 1 Score: 99.8 bits (247), Expect = 2.48e-22
Identity = 57/73 (78.08%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 72  SEMTFLLTESLELVEGKEV---AGLTGEESFDSEGGMGASAGIVYKRKAAFRSDLSLFFK 131
           SEMTFLLTESLEL EG E    AGLTGEESF  EGG GAS GIVYK    FRSDLSLF K
Sbjct: 188 SEMTFLLTESLELAEGNEASGSAGLTGEESFYCEGGRGASDGIVYKITVTFRSDLSLFLK 247

Query: 132 PVVISLSKESLDV 141
           PVVISLSKES+DV
Sbjct: 248 PVVISLSKESIDV 260

The following BLAST results are available for this feature:
BLAST of MC07g_new0016 vs.
Match NameE-valueIdentityDescription
BLAST of MC07g_new0016 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF3452252.12.48e-2278.08hypothetical protein FNV43_RR08350 [Rhamnella rubrinervis][more]
BLAST of MC07g_new0016 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MC07g_new0016 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g_new0016.1MC07g_new0016.1mRNA