MC07g_new0004 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0004
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	UPF0481 protein At3g47200-like
Location	MC07: 147154 .. 147780 (+)
RNA-Seq Expression	MC07g_new0004
Synteny	MC07g_new0004

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGCCGCCATCGATGCCCATCAGAATTATTAAAGACAACAATGAGTCTGCCGTGGTTATTCGGGTCAGGGAAAATCTCAATCAACTATTGTTGGATACTCCTGCCGTGGAGGCCGAAGGGCTTTCAATCTACAAAATACCACACTTCATGAGACAAGTTCAGCCCAAAGCTTTATTTGAGCCACAGTTGGTGTCGTTTGGGCCATACCACCATGGAGAATCGCATTTGTTTCGGATGGAACTGGAAAAACGTAAAGCATTTAAGAATTTTCAAACCAGGTACGGATTGCCCGTAGAGCCCATAGTGGAACGTGTGTGGAGCATGCTGGAAGATGTGCAAGGATGCTATGATGAGCTTGAGGGTGAATGGAAATTAGAAGATGGAGCAGCCAAGTTCTTGCAGCTCATGGTCCTGGATGGTTGTTTCATGCTGGAAGTCCTGTTGGCCGACAGTGGCGGCTGGCTAAGTAATATGAGGGAGGATATAGTGCGGGATATGCTGCTGCTTGAGAATCAGTTGCCTATGAAGCTTCTGGAGGAGCTGCATTCCATGGCAAACCATTCCTATTTAAAGGCATGCACCTTTCATCTCTCTTCTCATTTTATTAATCTCCATTATTGA

mRNA sequence

ATGGAGAGGCCGCCATCGATGCCCATCAGAATTATTAAAGACAACAATGAGTCTGCCGTGGTTATTCGGGTCAGGGAAAATCTCAATCAACTATTGTTGGATACTCCTGCCGTGGAGGCCGAAGGGCTTTCAATCTACAAAATACCACACTTCATGAGACAAGTTCAGCCCAAAGCTTTATTTGAGCCACAGTTGGTGTCGTTTGGGCCATACCACCATGGAGAATCGCATTTGTTTCGGATGGAACTGGAAAAACGTAAAGCATTTAAGAATTTTCAAACCAGGTACGGATTGCCCGTAGAGCCCATAGTGGAACGTGTGTGGAGCATGCTGGAAGATGTGCAAGGATGCTATGATGAGCTTGAGGGTGAATGGAAATTAGAAGATGGAGCAGCCAAGTTCTTGCAGCTCATGGTCCTGGATGGTTGTTTCATGCTGGAAGTCCTGTTGGCCGACAGTGGCGGCTGGCTAAGTAATATGAGGGAGGATATAGTGCGGGATATGCTGCTGCTTGAGAATCAGTTGCCTATGAAGCTTCTGGAGGAGCTGCATTCCATGGCAAACCATTCCTATTTAAAGGCATGCACCTTTCATCTCTCTTCTCATTTTATTAATCTCCATTATTGA

Coding sequence (CDS)

ATGGAGAGGCCGCCATCGATGCCCATCAGAATTATTAAAGACAACAATGAGTCTGCCGTGGTTATTCGGGTCAGGGAAAATCTCAATCAACTATTGTTGGATACTCCTGCCGTGGAGGCCGAAGGGCTTTCAATCTACAAAATACCACACTTCATGAGACAAGTTCAGCCCAAAGCTTTATTTGAGCCACAGTTGGTGTCGTTTGGGCCATACCACCATGGAGAATCGCATTTGTTTCGGATGGAACTGGAAAAACGTAAAGCATTTAAGAATTTTCAAACCAGGTACGGATTGCCCGTAGAGCCCATAGTGGAACGTGTGTGGAGCATGCTGGAAGATGTGCAAGGATGCTATGATGAGCTTGAGGGTGAATGGAAATTAGAAGATGGAGCAGCCAAGTTCTTGCAGCTCATGGTCCTGGATGGTTGTTTCATGCTGGAAGTCCTGTTGGCCGACAGTGGCGGCTGGCTAAGTAATATGAGGGAGGATATAGTGCGGGATATGCTGCTGCTTGAGAATCAGTTGCCTATGAAGCTTCTGGAGGAGCTGCATTCCATGGCAAACCATTCCTATTTAAAGGCATGCACCTTTCATCTCTCTTCTCATTTTATTAATCTCCATTATTGA

Protein sequence

MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLLEELHSMANHSYLKACTFHLSSHFINLHY

Homology

[Close]

BLAST of MC07g_new0004 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-11
Identity = 50/159 (31.45%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 41  EGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRKAFKNF---QTRYG 100
           E   I+++P     + PKA ++P++VS GPYH+GE HL  ++  K +  + F     +  
Sbjct: 44  ESCCIFRVPESFVALNPKA-YKPKVVSIGPYHYGEKHLQMIQQHKPRLLQLFLDEAKKKD 103

Query: 101 LPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGG-- 160
           +    +V+ V  + + ++  Y E     +L+ G    + +MVLDGCF+L V L  SG   
Sbjct: 104 VEENVLVKAVVDLEDKIRKSYSE-----ELKTG-HDLMFMMVLDGCFILMVFLIMSGNIE 163

Query: 161 ----------WLSNMREDIVRDMLLLENQLPMKLLEELH 185
                     WL +    I  D+LLLENQ+P  +L+ L+
Sbjct: 164 LSEDPIFSIPWLLS---SIQSDLLLLENQVPFFVLQTLY 192

[Close]

BLAST of MC07g_new0004 vs. NCBI nr
Match: XP_022148888.1 (UPF0481 protein At3g47200-like [Momordica charantia])

HSP 1 Score: 390 bits (1003), Expect = 4.56e-133
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL 60
           MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL
Sbjct: 1   MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL 60

Query: 61  FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE 120
           FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE
Sbjct: 61  FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE 120

Query: 121 LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL 180
           LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL
Sbjct: 121 LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL 180

Query: 181 EELHSMANHSYLK 193
           EELHSMANHSYLK
Sbjct: 181 EELHSMANHSYLK 193

[Close]

BLAST of MC07g_new0004 vs. NCBI nr
Match: XP_038875622.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 180 bits (456), Expect = 1.15e-50
Identity = 106/195 (54.36%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNNESA----VVIRVRENLNQLLLDTPAVEAEGL-------SIYKIP 60
           ME  P +PIR I+++N+      VVI+V+ NLN+LL D+ AV+  G        SIYKIP
Sbjct: 1   MEEQPLLPIRHIRNDNQVGKKDDVVIQVKNNLNKLL-DSAAVDEMGPLGESTQPSIYKIP 60

Query: 61  HFMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWS 120
            FMR++Q KA FEPQLVS GPYHHG+ HL  ME EK+KAF+ F   YGL +E IVE + +
Sbjct: 61  EFMRKIQAKA-FEPQLVSLGPYHHGKEHLVSMEEEKQKAFRRFVNDYGLNLESIVESMSN 120

Query: 121 MLEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDML 180
            LE++ G YD+L+ +WK +DGA KFL++M++DGCFML+    +    LS MR DI RDML
Sbjct: 121 NLENLWGAYDKLDEKWK-QDGA-KFLEVMIVDGCFMLDFF-KECPYSLSTMRWDIKRDML 180

Query: 181 LLENQLPMKLLEELH 184
           LLENQLPM+LL+EL+
Sbjct: 181 LLENQLPMQLLQELY 190

[Close]

BLAST of MC07g_new0004 vs. NCBI nr
Match: KAG6592830.1 (UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167 bits (424), Expect = 1.00e-45
Identity = 99/193 (51.30%), Postives = 130/193 (67.36%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNNESA---VVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQP 60
           ME+ P + I++I+D+N      +VI+V E LN+  LD+PA +    SIYK+P FMRQ   
Sbjct: 10  MEKQPPLSIKLIRDDNVDKPDDMVIQVMECLNEPGLDSPANKH---SIYKLPFFMRQTHS 69

Query: 61  KAL---FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDV 120
           +A    F+PQ+VSFGPYHHG+ HL  ME +K KAF   +TR GLPVE IV  V ++L+D+
Sbjct: 70  EAFNKAFDPQVVSFGPYHHGKKHLSPMERQKAKAFNTLKTR-GLPVEAIVREVSTILDDL 129

Query: 121 QGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQ 180
              YD LE EW  + G  KFL+LM++DGCFML  L  D    L NM+ DI  + LLLENQ
Sbjct: 130 LESYDRLEEEWTQDPG--KFLKLMIVDGCFMLR-LFCDCPASLVNMKMDIRLETLLLENQ 189

Query: 181 LPMKLLEELHSMA 187
           LP+KLL +LHS+A
Sbjct: 190 LPLKLLHKLHSIA 195

[Close]

BLAST of MC07g_new0004 vs. NCBI nr
Match: XP_023004239.1 (UPF0481 protein At3g47200-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 167 bits (422), Expect = 1.08e-45
Identity = 99/197 (50.25%), Postives = 135/197 (68.53%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ P + + + +D+N   ++ +V+RV+  L+QLL D+PA+        +E LSIYKIP 
Sbjct: 1   MEKQPPLQVMVGRDDNIGDKADMVVRVKGTLDQLL-DSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK K F +F+TR  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKTRCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD LE EW  + G  KFLQLM++DGCFML  L++     L N+  DI +DMLL
Sbjct: 121 LDELMESYDRLEEEWTQDPG--KFLQLMIVDGCFMLGFLISCPNS-LINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMA 187
           LENQLPM LLE+L+S+A
Sbjct: 181 LENQLPMLLLEKLYSIA 192

[Close]

BLAST of MC07g_new0004 vs. NCBI nr
Match: XP_023004238.1 (UPF0481 protein At3g47200-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 167 bits (422), Expect = 1.11e-45
Identity = 99/197 (50.25%), Postives = 135/197 (68.53%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ P + + + +D+N   ++ +V+RV+  L+QLL D+PA+        +E LSIYKIP 
Sbjct: 1   MEKQPPLQVMVGRDDNIGDKADMVVRVKGTLDQLL-DSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK K F +F+TR  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKTRCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD LE EW  + G  KFLQLM++DGCFML  L++     L N+  DI +DMLL
Sbjct: 121 LDELMESYDRLEEEWTQDPG--KFLQLMIVDGCFMLGFLISCPNS-LINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMA 187
           LENQLPM LLE+L+S+A
Sbjct: 181 LENQLPMLLLEKLYSIA 192

[Close]

BLAST of MC07g_new0004 vs. ExPASy TrEMBL
Match: A0A6J1D5C0 (UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111017450 PE=4 SV=1)

HSP 1 Score: 390 bits (1003), Expect = 2.21e-133
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL 60
           MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL
Sbjct: 1   MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL 60

Query: 61  FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE 120
           FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE
Sbjct: 61  FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE 120

Query: 121 LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL 180
           LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL
Sbjct: 121 LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL 180

Query: 181 EELHSMANHSYLK 193
           EELHSMANHSYLK
Sbjct: 181 EELHSMANHSYLK 193

[Close]

BLAST of MC07g_new0004 vs. ExPASy TrEMBL
Match: A0A6J1KVQ6 (UPF0481 protein At3g47200-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497633 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 5.25e-46
Identity = 99/197 (50.25%), Postives = 135/197 (68.53%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ P + + + +D+N   ++ +V+RV+  L+QLL D+PA+        +E LSIYKIP 
Sbjct: 1   MEKQPPLQVMVGRDDNIGDKADMVVRVKGTLDQLL-DSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK K F +F+TR  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKTRCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD LE EW  + G  KFLQLM++DGCFML  L++     L N+  DI +DMLL
Sbjct: 121 LDELMESYDRLEEEWTQDPG--KFLQLMIVDGCFMLGFLISCPNS-LINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMA 187
           LENQLPM LLE+L+S+A
Sbjct: 181 LENQLPMLLLEKLYSIA 192

[Close]

BLAST of MC07g_new0004 vs. ExPASy TrEMBL
Match: A0A6J1KYV8 (UPF0481 protein At3g47200-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497633 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 5.36e-46
Identity = 99/197 (50.25%), Postives = 135/197 (68.53%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ P + + + +D+N   ++ +V+RV+  L+QLL D+PA+        +E LSIYKIP 
Sbjct: 1   MEKQPPLQVMVGRDDNIGDKADMVVRVKGTLDQLL-DSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK K F +F+TR  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKTRCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD LE EW  + G  KFLQLM++DGCFML  L++     L N+  DI +DMLL
Sbjct: 121 LDELMESYDRLEEEWTQDPG--KFLQLMIVDGCFMLGFLISCPNS-LINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMA 187
           LENQLPM LLE+L+S+A
Sbjct: 181 LENQLPMLLLEKLYSIA 192

[Close]

BLAST of MC07g_new0004 vs. ExPASy TrEMBL
Match: A0A6J1HB25 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461183 PE=4 SV=1)

HSP 1 Score: 166 bits (420), Expect = 1.06e-45
Identity = 99/198 (50.00%), Postives = 137/198 (69.19%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ PS+ + + +D+N    + +V+RV+  L+QLL D+PA+        +E LSIYKIP 
Sbjct: 1   MEKHPSLQVMLGRDDNIGDNADMVVRVKGTLDQLL-DSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK K F +F+ R  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKARCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD+LE +WK + G  KFLQLM++DGCFML  L+ +    L N+  DI +DMLL
Sbjct: 121 LDELMESYDKLEEDWKEDPG--KFLQLMIVDGCFMLGFLI-NCPDSLINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMAN 188
           LENQLPM LLE+L+S+A+
Sbjct: 181 LENQLPMLLLEKLYSIAD 193

[Close]

BLAST of MC07g_new0004 vs. ExPASy TrEMBL
Match: A0A6J1H6V9 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461034 PE=4 SV=1)

HSP 1 Score: 166 bits (420), Expect = 1.39e-45
Identity = 98/193 (50.78%), Postives = 129/193 (66.84%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNNESA---VVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQP 60
           ME+ P + I++I+D+N      +VI+V E LN+  LD+P  +    SIYK+P FMRQ   
Sbjct: 10  MEKQPPLSIKLIRDDNVDKPDDMVIQVMECLNEPGLDSPTNKH---SIYKLPFFMRQTHS 69

Query: 61  KAL---FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDV 120
           +A    F+PQ+VSFGPYHHG+ HL  ME +K KAF   +TR GLPVE IV  V ++L+D+
Sbjct: 70  EAFNKAFDPQVVSFGPYHHGKKHLSPMERQKAKAFNTLKTR-GLPVEAIVREVSTILDDL 129

Query: 121 QGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQ 180
              YD LE EW  + G  KFL+LM++DGCFML  L  D    L NM+ DI  + LLLENQ
Sbjct: 130 LESYDRLEEEWTQDPG--KFLKLMIVDGCFMLR-LFCDCPASLINMKMDIRLETLLLENQ 189

Query: 181 LPMKLLEELHSMA 187
           LP+KLL +LHS+A
Sbjct: 190 LPLKLLHKLHSIA 195

[Close]

BLAST of MC07g_new0004 vs. TAIR 10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +R+ + Q L +      + L IY++P ++++   K+ F PQ VS GP+HHG  HL  
Sbjct: 117 VISIRDKMEQALREDATTSWDKLCIYRVPQYLQENNKKSYF-PQTVSLGPFHHGNKHLLP 176

Query: 81  MELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           M+  K +A      R    +E  ++ +  + +  + CY     E  ++  + KF +++VL
Sbjct: 177 MDRHKWRAVNMVMARTKHDIEMYIDAMKELEDRARACY-----EGPIDLSSNKFSEMLVL 236

Query: 141 DGCFMLEVLLADSGGW-------------LSNMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+LE+      G+             +      I RDM++LENQLP+ +L  L
Sbjct: 237 DGCFVLELFRGADEGFSELGYDRNDPVFAMRGSMHSIQRDMVMLENQLPLFVLNRL 286

[Close]

BLAST of MC07g_new0004 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 91.7 bits (226), Expect = 7.7e-19
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +R+ L Q   D        L IY++PH++++   K+ F PQ VS GPYHHG+  L  
Sbjct: 91  VISIRDKLEQADRDDDTTIWGKLCIYRVPHYLQENDKKSYF-PQTVSLGPYHHGKKRLRP 150

Query: 81  MELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           ME  K +A      R    +E     +  + E  + CY   EG   L     +F +++VL
Sbjct: 151 MERHKWRALNKVLKRLKQRIEMYTNAMRELEEKARACY---EGPISLSRN--EFTEMLVL 210

Query: 141 DGCFMLEVLLADSGGW-------------LSNMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+LE+      G+             +  +   I RDM++LENQLP+ +L+ L
Sbjct: 211 DGCFVLELFRGTVEGFTEIGYARNDPVFAMRGLMHSIQRDMIMLENQLPLFVLDRL 260

[Close]

BLAST of MC07g_new0004 vs. TAIR 10
Match: AT3G50170.2 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 91.7 bits (226), Expect = 7.7e-19
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +R+ L Q   D        L IY++PH++++   K+ F PQ VS GPYHHG+  L  
Sbjct: 91  VISIRDKLEQADRDDDTTIWGKLCIYRVPHYLQENDKKSYF-PQTVSLGPYHHGKKRLRP 150

Query: 81  MELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           ME  K +A      R    +E     +  + E  + CY   EG   L     +F +++VL
Sbjct: 151 MERHKWRALNKVLKRLKQRIEMYTNAMRELEEKARACY---EGPISLSRN--EFTEMLVL 210

Query: 141 DGCFMLEVLLADSGGW-------------LSNMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+LE+      G+             +  +   I RDM++LENQLP+ +L+ L
Sbjct: 211 DGCFVLELFRGTVEGFTEIGYARNDPVFAMRGLMHSIQRDMIMLENQLPLFVLDRL 260

[Close]

BLAST of MC07g_new0004 vs. TAIR 10
Match: AT3G50140.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18
Identity = 55/176 (31.25%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +++ + Q++ D      + + IY++P  +++    + F PQ VS GPYHHG+ HL  
Sbjct: 91  VIWIKDKMEQVMRDAATTSWDKICIYRVPLSLKKSDKNSYF-PQAVSLGPYHHGDEHLRP 150

Query: 81  MELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           M+  K +A      R    +E  ++ +  + E  + CY   EG   L     KF Q++VL
Sbjct: 151 MDYHKWRAVNMVMKRTKQGIEMYIDAMKELEERARACY---EGPIGLSSN--KFTQMLVL 210

Query: 141 DGCFMLEVLLADSGGW-------------LSNMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+L++      G+             +      I RDML+LENQLP+ +L  L
Sbjct: 211 DGCFVLDLFRGAYEGFSKLGYDRNDPVFAMRGSMHSIRRDMLMLENQLPLFVLNRL 260

[Close]

BLAST of MC07g_new0004 vs. TAIR 10
Match: AT3G50180.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-18
Identity = 57/176 (32.39%), Postives = 85/176 (48.30%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +++ L Q   +        L IYK+PH++     K+ F PQ VS GPYHHG      
Sbjct: 156 VISIKDKLEQAYRNDDRTSWGKLCIYKVPHYLHGNDKKSYF-PQTVSLGPYHHGRQQTQS 215

Query: 81  MELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           ME  K +A      R    +E  ++ +  + E  + CY   EG   L     +F ++++L
Sbjct: 216 MECHKWRAVNMVLKRTNQGIEVFLDAMIELEEKARACY---EGSIVLSSN--EFTEMLLL 275

Query: 141 DGCFMLEVLLADSGGWLS-------------NMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+LE+L   + G+L                   I RDM++LENQLP+ +L  L
Sbjct: 276 DGCFILELLQGVNEGFLKLGYDHNDPVFAVRGSMHSIQRDMIMLENQLPLFVLNRL 325

The following BLAST results are available for this feature:

BLAST of MC07g_new0004 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD53	2.6e-11	31.45	UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1	[more]

BLAST of MC07g_new0004 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148888.1	4.56e-133	100.00	UPF0481 protein At3g47200-like [Momordica charantia]	[more]
XP_038875622.1	1.15e-50	54.36	UPF0481 protein At3g47200-like [Benincasa hispida]	[more]
KAG6592830.1	1.00e-45	51.30	UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023004239.1	1.08e-45	50.25	UPF0481 protein At3g47200-like isoform X2 [Cucurbita maxima]	[more]
XP_023004238.1	1.11e-45	50.25	UPF0481 protein At3g47200-like isoform X1 [Cucurbita maxima]	[more]

BLAST of MC07g_new0004 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5C0	2.21e-133	100.00	UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111017450 PE...	[more]
A0A6J1KVQ6	5.25e-46	50.25	UPF0481 protein At3g47200-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1KYV8	5.36e-46	50.25	UPF0481 protein At3g47200-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1HB25	1.06e-45	50.00	UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461183 PE=...	[more]
A0A6J1H6V9	1.39e-45	50.78	UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461034 PE=...	[more]

BLAST of MC07g_new0004 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50130.1	1.5e-19	30.11	Plant protein of unknown function (DUF247)	[more]
AT3G50170.1	7.7e-19	32.95	Plant protein of unknown function (DUF247)	[more]
AT3G50170.2	7.7e-19	32.95	Plant protein of unknown function (DUF247)	[more]
AT3G50140.1	2.9e-18	31.25	Plant protein of unknown function (DUF247)	[more]
AT3G50180.1	3.8e-18	32.39	Plant protein of unknown function (DUF247)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 45..192 e-value: 7.1E-35 score: 121.0
IPR004158	Protein of unknown function DUF247, plant	PANTHER	PTHR31549	PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED	coord: 37..195
None	No IPR available	PANTHER	PTHR31549:SF210	PROTEIN, PUTATIVE (DUF247)-RELATED	coord: 37..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g_new0004.1	MC07g_new0004.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane