MC07g0830 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0830
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	zinc finger CCHC domain-containing protein 10
Location	MC07: 15886932 .. 15887996 (+)
RNA-Seq Expression	MC07g0830
Synteny	MC07g0830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCAGCTCTTAGTGCTGCAAAAGGCCTTAGTCGTGCCCAGGCCGAACGAGCAGCAGCCGCTGCGGCTCGAAACGTTAATGCTTATGGGCAGAAGGAAGAGGGCCCTAGCAGATGGCAAGAGAAGAGGGAAGCGAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGCCTCCATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGGTGGGACACTGGACTTACGAATGCAAAAATGAACGAGTCTACATATCCCGACCATCTCGAACTCAACAACTAAAAAACCCGAAGTTGAGGATGAAGATGTCAGAATCATATGAGTTGGACAACCCAGATTCTGGTAAGGAGAAGAAGAAGACCGAGAAGCATTCGAAGAAAAGCAAAAGAAAGCATCGTTCAAATGCAAAATCCGGTAGCGACAGCGAGGCCTCTGTTTTCGAGACTGATAGTGGGTCATCATCAGTTACTGGATCTGATGATTCTTCAGAAGGAAGCAGTTCAGATTACAGCTCTTCATCTGAATCAGAGTCAGAAAGGAGGAGTCGAAGGAGGAGAAAGAAGCAAAAGAAGGGGAGGAGAAAGAGGAGGTACAGCTCGTCTTCCGAATCTTCTGATTCAGACTCAGGATCTGAATCAGAATCTGATTCTGATGACGAGCGTAGTAAGAGGAAGAGCAGAAGGCACAGTAGAAGGCGCTAAGGTAATCAATCGAGTGAAGCGAAGCAAAGCGTATTAGAAGAGTCATATTAGAGAGATTTGAGTTCATTCAGTTTCATCCATCAGTCGTTTAGCCACAACTAGGGACGCTCTTGATAGAGTTGGTATCGAGTAATCTGAAGTTTGGGCTTTTCTAATTGAGCGTAGTATCATTTTCCTTTGCTCTCCTATAAATTGTTGTGGATGTATAAATTGTTGATACTTCAAATTTTATGTTTCTACGGATGCCGATGTTGGTTGATGCGAGGA

mRNA sequence

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCAGCTCTTAGTGCTGCAAAAGGCCTTAGTCGTGCCCAGGCCGAACGAGCAGCAGCCGCTGCGGCTCGAAACGTTAATGCTTATGGGCAGAAGGAAGAGGGCCCTAGCAGATGGCAAGAGAAGAGGGAAGCGAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGCCTCCATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGGTGGGACACTGGACTTACGAATGCAAAAATGAACGAGTCTACATATCCCGACCATCTCGAACTCAACAACTAAAAAACCCGAAGTTGAGGATGAAGATGTCAGAATCATATGAGTTGGACAACCCAGATTCTGGTAAGGAGAAGAAGAAGACCGAGAAGCATTCGAAGAAAAGCAAAAGAAAGCATCGTTCAAATGCAAAATCCGGTAGCGACAGCGAGGCCTCTGTTTTCGAGACTGATAGTGGGTCATCATCAGTTACTGGATCTGATGATTCTTCAGAAGGAAGCAGTTCAGATTACAGCTCTTCATCTGAATCAGAGTCAGAAAGGAGGAGTCGAAGGAGGAGAAAGAAGCAAAAGAAGGGGAGGAGAAAGAGGAGGTACAGCTCGTCTTCCGAATCTTCTGATTCAGACTCAGGATCTGAATCAGAATCTGATTCTGATGACGAGCGTAGTAAGAGGAAGAGCAGAAGGCACAGTAGAAGGCGCTAAGGTAATCAATCGAGTGAAGCGAAGCAAAGCGTATTAGAAGAGTCATATTAGAGAGATTTGAGTTCATTCAGTTTCATCCATCAGTCGTTTAGCCACAACTAGGGACGCTCTTGATAGAGTTGGTATCGAGTAATCTGAAGTTTGGGCTTTTCTAATTGAGCGTAGTATCATTTTCCTTTGCTCTCCTATAAATTGTTGTGGATGTATAAATTGTTGATACTTCAAATTTTATGTTTCTACGGATGCCGATGTTGGTTGATGCGAGGA

Coding sequence (CDS)

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCAGCTCTTAGTGCTGCAAAAGGCCTTAGTCGTGCCCAGGCCGAACGAGCAGCAGCCGCTGCGGCTCGAAACGTTAATGCTTATGGGCAGAAGGAAGAGGGCCCTAGCAGATGGCAAGAGAAGAGGGAAGCGAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGCCTCCATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGGTGGGACACTGGACTTACGAATGCAAAAATGAACGAGTCTACATATCCCGACCATCTCGAACTCAACAACTAAAAAACCCGAAGTTGAGGATGAAGATGTCAGAATCATATGAGTTGGACAACCCAGATTCTGGTAAGGAGAAGAAGAAGACCGAGAAGCATTCGAAGAAAAGCAAAAGAAAGCATCGTTCAAATGCAAAATCCGGTAGCGACAGCGAGGCCTCTGTTTTCGAGACTGATAGTGGGTCATCATCAGTTACTGGATCTGATGATTCTTCAGAAGGAAGCAGTTCAGATTACAGCTCTTCATCTGAATCAGAGTCAGAAAGGAGGAGTCGAAGGAGGAGAAAGAAGCAAAAGAAGGGGAGGAGAAAGAGGAGGTACAGCTCGTCTTCCGAATCTTCTGATTCAGACTCAGGATCTGAATCAGAATCTGATTCTGATGACGAGCGTAGTAAGAGGAAGAGCAGAAGGCACAGTAGAAGGCGCTAA

Protein sequence

MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSDSGSESESDSDDERSKRKSRRHSRRR

Homology

[Close]

BLAST of MC07g0830 vs. ExPASy Swiss-Prot
Match: Q5EB97 (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 8.4e-07
Identity = 67/172 (38.95%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 96  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEK 155
           +CQKC + GHWTYECK +R Y+ RPSRT +LK     +K  E+  L        +  TE+
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKK---ALKEKENRLL---QQSMGETNTER 81

Query: 156 HSKKSKRKHRSNAKSGSDSEASVFETDSGSSSVTGSDD-------SSEGSSSDYSSSSES 215
            +KK +R     + S SDS AS   ++S +S+ + S+D       SS  SSS YSSSS S
Sbjct: 82  KTKKKRRPKSVTSTSSSDSSASESSSESETSASSSSEDSDADGSLSSSSSSSAYSSSSSS 141

Query: 216 ESERRSRRRRKKQKKGRRKRRYSSSSESSDSDSGSESESDSDDERSKRKSRR 261
            S   S                S S  SS S S S SES SDDE  K++ ++
Sbjct: 142 SSSSSSSS--------------SDSDSSSSSSSSSSSESSSDDEPPKKRKKK 173

[Close]

BLAST of MC07g0830 vs. ExPASy Swiss-Prot
Match: Q8TBK6 (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-04
Identity = 69/180 (38.33%), Postives = 87/180 (48.33%), Query Frame = 0


Query: 87  MSSAGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMSESYELDNPDS 146
           +S A     +CQKC + GHWTYEC  +R Y+ RPSRT +LK     +K  E+  L     
Sbjct: 35  ISEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKK---ALKEKENRLLLQQSI 94

Query: 147 GKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFETDSGSSSVTGSDDSSEGSSSDYSSSS 206
           G E     K  KK  +   S++ S SDS AS     S  S  T +  SSE S +D SSSS
Sbjct: 95  G-ETNVERKAKKKRSKSVTSSSSSSSDSSAS---DSSSESEETSTSSSSEDSDTDESSSS 154

Query: 207 ESESERRSRRRRKKQKKGRRKRRYSSSSESSDSDSGSES------ESDSDDERSKRKSRR 261
            S S   +                SSSS  SDSDS S S      +S SDDE  K+K ++
Sbjct: 155 SSSSASSTT---------------SSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKKKKK 192

[Close]

BLAST of MC07g0830 vs. ExPASy Swiss-Prot
Match: Q9CX48 (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 68/165 (41.21%), Postives = 85/165 (51.52%), Query Frame = 0


Query: 96  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEK 155
           +CQKC + GHWTYECK +R Y+ RPSRT +LK  K   +      L +      +KK +K
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELK--KALKEKENRLLLQSIGETNIEKKIKK 81

Query: 156 HSKKSKRKHRSNAKSGSDSEASVFETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSR 215
             KK  +   S++ S SDS AS    +S S S T +  SSE S SD S SS S S   S 
Sbjct: 82  --KKRSKSVTSSSTSSSDSSAS----ESSSESETSASSSSEDSDSDESLSSSSSSSSSSA 141

Query: 216 RRRKKQKKGRRKRRYSSSSESSDSDSGSESESDSDDERSKRKSRR 261
                          S SS SS S S S SES SDDE  K+K ++
Sbjct: 142 CSSSSSSSSSSSSSDSDSS-SSSSSSSSSSESSSDDEPQKKKKKK 177

[Close]

BLAST of MC07g0830 vs. NCBI nr
Match: XP_022138805.1 (zinc finger CCHC domain-containing protein 10 [Momordica charantia])

HSP 1 Score: 435 bits (1119), Expect = 2.48e-152
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE 180

Query: 181 TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD 240
           TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD
Sbjct: 181 TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD 240

Query: 241 SGSESESDSDDERSKRKSRRHSRRR 265
           SGSESESDSDDERSKRKSRRHSRRR
Sbjct: 241 SGSESESDSDDERSKRKSRRHSRRR 265

[Close]

BLAST of MC07g0830 vs. NCBI nr
Match: XP_011649249.1 (zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypothetical protein Csa_006617 [Cucumis sativus])

HSP 1 Score: 382 bits (981), Expect = 2.46e-131
Identity = 240/265 (90.57%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMS AGGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKM  S ELDNPD G+EKK  +   KKSKRKHRSNAKS SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 181 TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD 240
           TDSGSSSVT SDDSSE SSSDYSSSSESESER SRRRRKKQK+GRRKRRYSSSS+SSDSD
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESER-SRRRRKKQKRGRRKRRYSSSSDSSDSD 240

Query: 241 SGSESESDSDDERSKRKSRRHSRRR 265
           S SESESDSD+ERS+RKSRRHSR+R
Sbjct: 241 SRSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of MC07g0830 vs. NCBI nr
Match: XP_022959515.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 382 bits (981), Expect = 2.83e-131
Identity = 242/268 (90.30%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHS--KKSKRKHRSNAKSGSDSEASV 180
           SRTQQLKNPKLRMKM+ S ELDNPDSG E+KKT+K    KKSKRKHRS  KS SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTGSDDSSEGSSSDYSSSSESESER-RSRRRRKKQKKGRRKRRYSSSSESS 240
           FETDSGSSSVTGSDDSSE SSSDYSSSS+SESER R RRRRKKQK+GRRKRRYSSSS+SS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDSDDERSKRKSRRHSRRR 265
           DSDSGSESESDSD ERS+RKSRRHSR+R
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of MC07g0830 vs. NCBI nr
Match: XP_008460988.2 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_008460989.1 PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >KAA0045615.1 zinc finger CCHC domain-containing protein 10 [Cucumis melo var. makuwa])

HSP 1 Score: 380 bits (976), Expect = 1.42e-130
Identity = 243/266 (91.35%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSSAGGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSK-KSKRKHRSNAKSGSDSEASVF 180
           SRTQQLKNPKLRMKM  S ELDNPD G+E+K  +KHSK KSKRKHRSNAKS SDSEASVF
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEK-PKKHSKNKSKRKHRSNAKSDSDSEASVF 180

Query: 181 ETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDS 240
           ETDSGSSSVT SDDSSE SSSDYSSSSESE ER SRRRRKKQK+GRRKRRYSSSS+SSDS
Sbjct: 181 ETDSGSSSVTESDDSSEESSSDYSSSSESECER-SRRRRKKQKRGRRKRRYSSSSDSSDS 240

Query: 241 DSGSESESDSDDERSKRKSRRHSRRR 265
           DS SESESDSD+ERS+RKSRRHSRRR
Sbjct: 241 DSRSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of MC07g0830 vs. NCBI nr
Match: KAG7013679.1 (Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379 bits (973), Expect = 4.67e-130
Identity = 241/268 (89.93%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHS--KKSKRKHRSNAKSGSDSEASV 180
           SRTQQLKNPKLRMKM+ S ELDNPDSG E+KKT+K    KKSKRKHRS  KS SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTGSDDSSEGSSSDYSSSSESESER-RSRRRRKKQKKGRRKRRYSSSSESS 240
           FETDSGSSSVTGSDDSSE SSSDYSSSS+SESER R RRRRKKQK+GRRKRRYSSSS+SS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDSDDERSKRKSRRHSRRR 265
           DSDS SESESDSD ERS+RKSRRHSR+R
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of MC07g0830 vs. ExPASy TrEMBL
Match: A0A6J1CAJ2 (zinc finger CCHC domain-containing protein 10 OS=Momordica charantia OX=3673 GN=LOC111009881 PE=4 SV=1)

HSP 1 Score: 435 bits (1119), Expect = 1.20e-152
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE 180

Query: 181 TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD 240
           TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD
Sbjct: 181 TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD 240

Query: 241 SGSESESDSDDERSKRKSRRHSRRR 265
           SGSESESDSDDERSKRKSRRHSRRR
Sbjct: 241 SGSESESDSDDERSKRKSRRHSRRR 265

[Close]

BLAST of MC07g0830 vs. ExPASy TrEMBL
Match: A0A0A0LJ33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 382 bits (981), Expect = 1.19e-131
Identity = 240/265 (90.57%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMS AGGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKM  S ELDNPD G+EKK  +   KKSKRKHRSNAKS SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 181 TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD 240
           TDSGSSSVT SDDSSE SSSDYSSSSESESER SRRRRKKQK+GRRKRRYSSSS+SSDSD
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESER-SRRRRKKQKRGRRKRRYSSSSDSSDSD 240

Query: 241 SGSESESDSDDERSKRKSRRHSRRR 265
           S SESESDSD+ERS+RKSRRHSR+R
Sbjct: 241 SRSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of MC07g0830 vs. ExPASy TrEMBL
Match: A0A6J1H6H5 (zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111460472 PE=4 SV=1)

HSP 1 Score: 382 bits (981), Expect = 1.37e-131
Identity = 242/268 (90.30%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHS--KKSKRKHRSNAKSGSDSEASV 180
           SRTQQLKNPKLRMKM+ S ELDNPDSG E+KKT+K    KKSKRKHRS  KS SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTGSDDSSEGSSSDYSSSSESESER-RSRRRRKKQKKGRRKRRYSSSSESS 240
           FETDSGSSSVTGSDDSSE SSSDYSSSS+SESER R RRRRKKQK+GRRKRRYSSSS+SS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDSDDERSKRKSRRHSRRR 265
           DSDSGSESESDSD ERS+RKSRRHSR+R
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of MC07g0830 vs. ExPASy TrEMBL
Match: A0A1S3CDQ2 (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 380 bits (976), Expect = 6.87e-131
Identity = 243/266 (91.35%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSSAGGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSK-KSKRKHRSNAKSGSDSEASVF 180
           SRTQQLKNPKLRMKM  S ELDNPD G+E+K  +KHSK KSKRKHRSNAKS SDSEASVF
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEK-PKKHSKNKSKRKHRSNAKSDSDSEASVF 180

Query: 181 ETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDS 240
           ETDSGSSSVT SDDSSE SSSDYSSSSESE ER SRRRRKKQK+GRRKRRYSSSS+SSDS
Sbjct: 181 ETDSGSSSVTESDDSSEESSSDYSSSSESECER-SRRRRKKQKRGRRKRRYSSSSDSSDS 240

Query: 241 DSGSESESDSDDERSKRKSRRHSRRR 265
           DS SESESDSD+ERS+RKSRRHSRRR
Sbjct: 241 DSRSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of MC07g0830 vs. ExPASy TrEMBL
Match: A0A5A7TW64 (Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001260 PE=4 SV=1)

HSP 1 Score: 380 bits (976), Expect = 6.87e-131
Identity = 243/266 (91.35%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSSAGGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSK-KSKRKHRSNAKSGSDSEASVF 180
           SRTQQLKNPKLRMKM  S ELDNPD G+E+K  +KHSK KSKRKHRSNAKS SDSEASVF
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEK-PKKHSKNKSKRKHRSNAKSDSDSEASVF 180

Query: 181 ETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDS 240
           ETDSGSSSVT SDDSSE SSSDYSSSSESE ER SRRRRKKQK+GRRKRRYSSSS+SSDS
Sbjct: 181 ETDSGSSSVTESDDSSEESSSDYSSSSESECER-SRRRRKKQKRGRRKRRYSSSSDSSDS 240

Query: 241 DSGSESESDSDDERSKRKSRRHSRRR 265
           DS SESESDSD+ERS+RKSRRHSRRR
Sbjct: 241 DSRSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of MC07g0830 vs. TAIR 10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 271.6 bits (693), Expect = 6.9e-73
Identity = 191/282 (67.73%), Postives = 215/282 (76.24%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MS+ K+EKSQ AA+RIKAA L+AAKGLSR QAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAG---GAAAQCQKCYQVGHWTYECKNERVYI 120
           E KRQMYLMSTEKAVRLGERKD   S S+ G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 121 SRPSRTQQLKNPKLRMKMS--------ESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAK 180
           SRPSRTQQLKNPKLR K S        +  E + PD+   K + EK SKKSKRKHRS + 
Sbjct: 121 SRPSRTQQLKNPKLRTKPSVDDLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKHRSKSD 180

Query: 181 SGSDSEASVFETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRK------KQKK 240
           S SDSEASVFETD        SD SS  SSS+YSSSS+SE ERR RR+ K      KQ+K
Sbjct: 181 SESDSEASVFETD--------SDGSSGESSSEYSSSSDSEDERRRRRKAKKSKKKQKQRK 240

Query: 241 GRRKRRYSSSSESSDSDSGSESESDSDDERSKRKSRRHSRRR 266
            RR+R  SSSSESS+S+S S+S+SD D  R K+KS+RHS +R
Sbjct: 241 ERRRRYSSSSSESSESESASDSDSDEDRSRRKKKSKRHSNKR 274

The following BLAST results are available for this feature:

BLAST of MC07g0830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5EB97	8.4e-07	38.95	Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z...	[more]
Q8TBK6	1.0e-04	38.33	Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10...	[more]
Q9CX48	1.7e-04	41.21	Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1...	[more]

BLAST of MC07g0830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138805.1	2.48e-152	100.00	zinc finger CCHC domain-containing protein 10 [Momordica charantia]	[more]
XP_011649249.1	2.46e-131	90.57	zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypo...	[more]
XP_022959515.1	2.83e-131	90.30	zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata]	[more]
XP_008460988.2	1.42e-130	91.35	PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_0084...	[more]
KAG7013679.1	4.67e-130	89.93	Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of MC07g0830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAJ2	1.20e-152	100.00	zinc finger CCHC domain-containing protein 10 OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0LJ33	1.19e-131	90.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1	[more]
A0A6J1H6H5	1.37e-131	90.30	zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662...	[more]
A0A1S3CDQ2	6.87e-131	91.35	zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TW64	6.87e-131	91.35	Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of MC07g0830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49400.1	6.9e-73	67.73	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 92..129 e-value: 6.1E-20 score: 70.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..205
IPR039715	Zinc finger CCHC domain-containing protein 10	PANTHER	PTHR13491	ZCCHC10 PROTEIN	coord: 1..256
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 88..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0830.1	MC07g0830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding