MC07g0647 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0647
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein Pet
Location	MC07: 14389195 .. 14390535 (+)
RNA-Seq Expression	MC07g0647
Synteny	MC07g0647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCAGGACCTCCGTAGGCCCATAAATGTAGAATATGGGCCGAAGCGCAATGAGCTTCCTCAACCTCCTTCGTGGAATAATTTCTTTGTTTTTCCTGTCTGCCTCTTTGCCCTTTTGCCAGGATTTTCTAGGGTTCGGGATTTCAGCAATTTTCTTTTTTTCTTTTTTTTTTTTTTCTGGAAAATGTCTTCAATTGGAACATCGAAGGGAATTCTCGAGATCGCCAAATTCGGGCTTTATGTCAGTATACCCATCTTTCTTATGTACACCTTCGCCAACAATAGCAAAAATCTCCAGAGATTCATTGGCAAGGTAACTCTATTTCTCTCTTCCCCTTTCCTATCACTAAATCATGTTTGTGGGTCTGATTATTAGCGAGTATTTTTCCCTTTTTCTTTTCTTTTTTTGTGCGGAGGTGTTCTTTAATTACTCTCAAGATGATCTGTGGGTAGTTCAATTCCTTTTCTTTTTAGCAATTTTTTACCTCTAGGACTTTGCCCATAGGAAATTTGTGTTTTTGGGTACCCTAGCAGATTAATTTCTGAAGAAGAAAGGCAAATTTCCCATGATGCTGATACTGAGAGTGGGAAATTTTGATTCTAAGTGTTAGATTGAAAGTTGATAAATGATGACCATGTTTGATATTTTCCAGGTAGAATGAATTAGCACTAATTTTATTTGTTTCATACTTGTGCATTGAACTACATTTCATTTTGTAAAGTCAAGATCCTGTTTTATCTGTTTACAACAGAGTAGAGTTTTCTCTGTCAGCAGTTTGAGGAGGTTGTAAAACCTTTAATACAATGTCATGTTCTTATTGATCTTCATAAGCAATATCAATACTGTCTGAGTGCAAAGATACTTCTTTCTTATGTCATTATGGACACAGTCTTATATAGTGTATCCTCCCGAGGGACCAAGGCCTCCGTCCCCGGAAGAAGTAAGAGAGATGGCGCGTGAATTGGCCCGCAAGAACAATATTCGTTGATGCTTTGTGTGGTCTGTAGCAGTGGGATCGCCGTGTAATCTGTTTATAGAGGAATAATCGACATTAGGGAGCGAGAACGGTCGGGGCAGCCTTCGGTAAGCTTAACCCTGCCATGAGTATCAGTCTTCCTTAATATGGTTGTGCTTTTGAAAAACAAAAAAAACCTTTCAACAATGAGAGATACTGCTTTAACTGTGGTGATATGGCTGTGTAATAATGGGAAAATTTGATCTGTGATGCCATGATCCACTGTGATACTGTTTCTCTTTATAAACATGAACTTTTTGGTATGTGATTGGAACATTATATCATATGTTATTTGGAGATCAAATGATATTTTAGCATATATTTTG

mRNA sequence

GTTCAGGACCTCCGTAGGCCCATAAATGTAGAATATGGGCCGAAGCGCAATGAGCTTCCTCAACCTCCTTCGTGGAATAATTTCTTTGTTTTTCCTGTCTGCCTCTTTGCCCTTTTGCCAGGATTTTCTAGGGTTCGGGATTTCAGCAATTTTCTTTTTTTCTTTTTTTTTTTTTTCTGGAAAATGTCTTCAATTGGAACATCGAAGGGAATTCTCGAGATCGCCAAATTCGGGCTTTATGTCAGTATACCCATCTTTCTTATGTACACCTTCGCCAACAATAGCAAAAATCTCCAGAGATTCATTGGCAAGTCTTATATAGTGTATCCTCCCGAGGGACCAAGGCCTCCGTCCCCGGAAGAAGTAAGAGAGATGGCGCGTGAATTGGCCCGCAAGAACAATATTCGTTGATGCTTTGTGTGGTCTGTAGCAGTGGGATCGCCGTGTAATCTGTTTATAGAGGAATAATCGACATTAGGGAGCGAGAACGGTCGGGGCAGCCTTCGGTAAGCTTAACCCTGCCATGAGTATCAGTCTTCCTTAATATGGTTGTGCTTTTGAAAAACAAAAAAAACCTTTCAACAATGAGAGATACTGCTTTAACTGTGGTGATATGGCTGTGTAATAATGGGAAAATTTGATCTGTGATGCCATGATCCACTGTGATACTGTTTCTCTTTATAAACATGAACTTTTTGGTATGTGATTGGAACATTATATCATATGTTATTTGGAGATCAAATGATATTTTAGCATATATTTTG

Coding sequence (CDS)

GTTCAGGACCTCCGTAGGCCCATAAATGTAGAATATGGGCCGAAGCGCAATGAGCTTCCTCAACCTCCTTCGTGGAATAATTTCTTTGTTTTTCCTGTCTGCCTCTTTGCCCTTTTGCCAGGATTTTCTAGGGTTCGGGATTTCAGCAATTTTCTTTTTTTCTTTTTTTTTTTTTTCTGGAAAATGTCTTCAATTGGAACATCGAAGGGAATTCTCGAGATCGCCAAATTCGGGCTTTATGTCAGTATACCCATCTTTCTTATGTACACCTTCGCCAACAATAGCAAAAATCTCCAGAGATTCATTGGCAAGTCTTATATAGTGTATCCTCCCGAGGGACCAAGGCCTCCGTCCCCGGAAGAAGTAAGAGAGATGGCGCGTGAATTGGCCCGCAAGAACAATATTCGTTGA

Protein sequence

VQDLRRPINVEYGPKRNELPQPPSWNNFFVFPVCLFALLPGFSRVRDFSNFLFFFFFFFWKMSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEEVREMARELARKNNIR

Homology

[Close]

BLAST of MC07g0647 vs. NCBI nr
Match: XP_022138377.1 (uncharacterized protein LOC111009565 [Momordica charantia])

HSP 1 Score: 148 bits (374), Expect = 7.72e-44
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNNIR
Sbjct: 61  VREMARELARKNNIR 75

[Close]

BLAST of MC07g0647 vs. NCBI nr
Match: XP_023006766.1 (uncharacterized protein LOC111499403 [Cucurbita maxima] >XP_023006767.1 uncharacterized protein LOC111499403 [Cucurbita maxima] >XP_023006768.1 uncharacterized protein LOC111499403 [Cucurbita maxima] >XP_023006769.1 uncharacterized protein LOC111499403 [Cucurbita maxima] >XP_023547605.1 uncharacterized protein LOC111806495 [Cucurbita pepo subsp. pepo] >XP_023547606.1 uncharacterized protein LOC111806495 [Cucurbita pepo subsp. pepo] >KAG7013515.1 hypothetical protein SDJN02_23681 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145 bits (366), Expect = 1.28e-42
Identity = 72/75 (96.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFG+YV+IPIFLMYTFANNSKNLQ+FIGKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGIYVTIPIFLMYTFANNSKNLQKFIGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNNIR
Sbjct: 61  VREMARELARKNNIR 75

[Close]

BLAST of MC07g0647 vs. NCBI nr
Match: XP_022958891.1 (uncharacterized protein LOC111460043 [Cucurbita moschata] >XP_022958892.1 uncharacterized protein LOC111460043 [Cucurbita moschata] >XP_022958893.1 uncharacterized protein LOC111460043 [Cucurbita moschata])

HSP 1 Score: 144 bits (362), Expect = 5.19e-42
Identity = 70/75 (93.33%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFG+YV++PIFLMYTFANNSKNLQ+FIGKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGIYVTVPIFLMYTFANNSKNLQKFIGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNN+R
Sbjct: 61  VREMARELARKNNMR 75

[Close]

BLAST of MC07g0647 vs. NCBI nr
Match: XP_004150908.1 (uncharacterized protein LOC101207372 [Cucumis sativus] >XP_031737030.1 uncharacterized protein LOC101207372 [Cucumis sativus])

HSP 1 Score: 142 bits (359), Expect = 1.49e-41
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFG+YV+IPI LMYTFANNSKNLQRF+GKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGIYVTIPIVLMYTFANNSKNLQRFMGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNNIR
Sbjct: 61  VREMARELARKNNIR 75

[Close]

BLAST of MC07g0647 vs. NCBI nr
Match: XP_038906534.1 (uncharacterized protein LOC120092510 [Benincasa hispida] >XP_038906535.1 uncharacterized protein LOC120092510 [Benincasa hispida] >XP_038906536.1 uncharacterized protein LOC120092510 [Benincasa hispida])

HSP 1 Score: 142 bits (358), Expect = 2.11e-41
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSS+GTSKGILEIAKFG+YV+IPI LMYTFANNSKNLQRF+GKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSVGTSKGILEIAKFGIYVTIPIVLMYTFANNSKNLQRFMGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNNIR
Sbjct: 61  VREMARELARKNNIR 75

[Close]

BLAST of MC07g0647 vs. ExPASy TrEMBL
Match: A0A6J1CAY1 (uncharacterized protein LOC111009565 OS=Momordica charantia OX=3673 GN=LOC111009565 PE=4 SV=1)

HSP 1 Score: 148 bits (374), Expect = 3.74e-44
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNNIR
Sbjct: 61  VREMARELARKNNIR 75

[Close]

BLAST of MC07g0647 vs. ExPASy TrEMBL
Match: A0A6J1L334 (uncharacterized protein LOC111499403 OS=Cucurbita maxima OX=3661 GN=LOC111499403 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 6.18e-43
Identity = 72/75 (96.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFG+YV+IPIFLMYTFANNSKNLQ+FIGKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGIYVTIPIFLMYTFANNSKNLQKFIGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNNIR
Sbjct: 61  VREMARELARKNNIR 75

[Close]

BLAST of MC07g0647 vs. ExPASy TrEMBL
Match: A0A6J1H3E4 (uncharacterized protein LOC111460043 OS=Cucurbita moschata OX=3662 GN=LOC111460043 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 2.51e-42
Identity = 70/75 (93.33%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFG+YV++PIFLMYTFANNSKNLQ+FIGKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGIYVTVPIFLMYTFANNSKNLQKFIGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNN+R
Sbjct: 61  VREMARELARKNNMR 75

[Close]

BLAST of MC07g0647 vs. ExPASy TrEMBL
Match: A0A0A0LIL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G205950 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 7.20e-42
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFG+YV+IPI LMYTFANNSKNLQRF+GKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGIYVTIPIVLMYTFANNSKNLQRFMGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNIR 136
           VREMARELARKNNIR
Sbjct: 61  VREMARELARKNNIR 75

[Close]

BLAST of MC07g0647 vs. ExPASy TrEMBL
Match: A0A1S3BLQ1 (uncharacterized protein LOC103491216 OS=Cucumis melo OX=3656 GN=LOC103491216 PE=4 SV=1)

HSP 1 Score: 141 bits (355), Expect = 3.01e-41
Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGKSYIVYPPEGPRPPSPEE 121
           MSSIGTSKGILEIAKFG+YV+IPI LMYTFANNSKNLQRF+GKSYIVYPPEGPRPPSPEE
Sbjct: 1   MSSIGTSKGILEIAKFGIYVTIPIVLMYTFANNSKNLQRFMGKSYIVYPPEGPRPPSPEE 60

Query: 122 VREMARELARKNNI 135
           VREMARELARKNNI
Sbjct: 61  VREMARELARKNNI 74

[Close]

BLAST of MC07g0647 vs. TAIR 10
Match: AT4G14615.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 7.7e-28
Identity = 56/76 (73.68%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIG-KSYIVYPPEGPRPPSPE 121
           MSS+GTSKG+LEI KFG+YV++PI LMYTFANNS N+++F+G +SY+VYP E PRPPSP+
Sbjct: 1   MSSVGTSKGVLEIVKFGVYVAVPIVLMYTFANNSTNIKKFMGNRSYVVYPEEAPRPPSPD 60

Query: 122 EVREMARELARKNNIR 137
           E+REMARELARK NIR
Sbjct: 61  ELREMARELARKKNIR 76

[Close]

BLAST of MC07g0647 vs. TAIR 10
Match: AT1G52825.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14615.1); Has 52 Blast hits to 49 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 6.1e-25
Identity = 52/72 (72.22%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 62  MSSIGTSKGILEIAKFGLYVSIPIFLMYTFANNSKNLQRFIGK-SYIVYPPEGPRPPSPE 121
           MSS+GTSKGILEIAKFG+YV++PI L+YTFANNS N+++F+G  SY+VYP E PRPPSPE
Sbjct: 1   MSSVGTSKGILEIAKFGVYVAVPIVLIYTFANNSTNIKKFMGNHSYVVYPKEAPRPPSPE 60

Query: 122 EVREMARELARK 133
           E+REMA++LA K
Sbjct: 61  ELREMAKQLALK 72

The following BLAST results are available for this feature:

BLAST of MC07g0647 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g0647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138377.1	7.72e-44	100.00	uncharacterized protein LOC111009565 [Momordica charantia]	[more]
XP_023006766.1	1.28e-42	96.00	uncharacterized protein LOC111499403 [Cucurbita maxima] >XP_023006767.1 uncharac...	[more]
XP_022958891.1	5.19e-42	93.33	uncharacterized protein LOC111460043 [Cucurbita moschata] >XP_022958892.1 unchar...	[more]
XP_004150908.1	1.49e-41	94.67	uncharacterized protein LOC101207372 [Cucumis sativus] >XP_031737030.1 uncharact...	[more]
XP_038906534.1	2.11e-41	93.33	uncharacterized protein LOC120092510 [Benincasa hispida] >XP_038906535.1 unchara...	[more]

BLAST of MC07g0647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAY1	3.74e-44	100.00	uncharacterized protein LOC111009565 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1L334	6.18e-43	96.00	uncharacterized protein LOC111499403 OS=Cucurbita maxima OX=3661 GN=LOC111499403...	[more]
A0A6J1H3E4	2.51e-42	93.33	uncharacterized protein LOC111460043 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]
A0A0A0LIL9	7.20e-42	94.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G205950 PE=4 SV=1	[more]
A0A1S3BLQ1	3.01e-41	94.59	uncharacterized protein LOC103491216 OS=Cucumis melo OX=3656 GN=LOC103491216 PE=...	[more]

BLAST of MC07g0647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14615.1	7.7e-28	73.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G52825.1	6.1e-25	72.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018625	Protein Pet100	PFAM	PF09803	Pet100	coord: 72..133 e-value: 2.8E-8 score: 34.1
None	No IPR available	PANTHER	PTHR35700:SF2	PROTEIN, PUTATIVE-RELATED	coord: 62..134
None	No IPR available	PANTHER	PTHR35700	OS07G0181800 PROTEIN	coord: 62..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0647.1	MC07g0647.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033617	mitochondrial cytochrome c oxidase assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion