MC07g0599 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0599
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	repetitive proline-rich cell wall protein 3-like
Location	MC07: 14023339 .. 14023599 (+)
RNA-Seq Expression	MC07g0599
Synteny	MC07g0599

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTCAAATACTTCCTTCTGCTTCTTCTCGGAGTGGTGCTTCTCACCACCTCCCAAGCTCTGAGAATTCCGACGGAGTCCAATCGAGAAGTGATTCCGGTCACCGACCAGAAGCTTCCCTCTGTCACTGCCACCACCACTGCTACCGACCCCGAGTCGGAGGACGAGAAGTTGAAGTACTACAAGAACAAACCTAGCTCTAAGCATCGGCCTCCCTACAAAAAACCACCTTACCCCTACAAGATACCGTCCTCCAAC

mRNA sequence

ATGTTTCTCAAATACTTCCTTCTGCTTCTTCTCGGAGTGGTGCTTCTCACCACCTCCCAAGCTCTGAGAATTCCGACGGAGTCCAATCGAGAAGTGATTCCGGTCACCGACCAGAAGCTTCCCTCTGTCACTGCCACCACCACTGCTACCGACCCCGAGTCGGAGGACGAGAAGTTGAAGTACTACAAGAACAAACCTAGCTCTAAGCATCGGCCTCCCTACAAAAAACCACCTTACCCCTACAAGATACCGTCCTCCAAC

Coding sequence (CDS)

ATGTTTCTCAAATACTTCCTTCTGCTTCTTCTCGGAGTGGTGCTTCTCACCACCTCCCAAGCTCTGAGAATTCCGACGGAGTCCAATCGAGAAGTGATTCCGGTCACCGACCAGAAGCTTCCCTCTGTCACTGCCACCACCACTGCTACCGACCCCGAGTCGGAGGACGAGAAGTTGAAGTACTACAAGAACAAACCTAGCTCTAAGCATCGGCCTCCCTACAAAAAACCACCTTACCCCTACAAGATACCGTCCTCCAAC

Protein sequence

MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQKLPSVTATTTATDPESEDEKLKYYKNKPSSKHRPPYKKPPYPYKIPSSN

Homology

[Close]

BLAST of MC07g0599 vs. NCBI nr
Match: POE15980.1 (hypothetical protein BV923_23575 [Pectobacterium odoriferum])

HSP 1 Score: 81.3 bits (199), Expect = 8.28e-18
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQKLPSVTATTTATDPESEDEKLK 60
          MFLKYFLLLLL VVLLTT+QAL+ P++SN+EVIP+TD++LP+ T T T  D ES+  K  
Sbjct: 1  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKP 60

Query: 61 YYKN----KPSSKHRPPYKK-PPYPYKIPSSN 87
          YYK     +P  K  PPYKK PPY    PSS+
Sbjct: 61 YYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD 92

[Close]

BLAST of MC07g0599 vs. NCBI nr
Match: WP_219729224.1 (hypothetical protein, partial [Pectobacterium odoriferum])

HSP 1 Score: 81.3 bits (199), Expect = 9.73e-18
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQKLPSVTATTTATDPESEDEKLK 60
          MFLKYFLLLLL VVLLTT+QAL+ P++SN+EVIP+TD++LP+ T T T  D ES+  K  
Sbjct: 7  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKP 66

Query: 61 YYKN----KPSSKHRPPYKK-PPYPYKIPSSN 87
          YYK     +P  K  PPYKK PPY    PSS+
Sbjct: 67 YYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD 98

[Close]

BLAST of MC07g0599 vs. NCBI nr
Match: XP_023513909.1 (repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo] >KAG6593838.1 hypothetical protein SDJN03_13314, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026170.1 hypothetical protein SDJN02_12669, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 80.9 bits (198), Expect = 1.14e-17
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQKLPSVTATTTATDPESEDEKLK 60
          MF+KYFLLLLL VVLLTT+QAL+ P++S  EVIPV++QKLPS TAT T  +P SE E+ K
Sbjct: 1  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDT--EPASEHEESK 60

Query: 61 YYKNKPSSKHRP-----PYKK-PPYPYKIPSSN 87
          +Y+ +P  K+ P     PYKK PPY    PSSN
Sbjct: 61 FYRKRPYKKYPPYKRYPPYKKRPPYKKYPPSSN 91

[Close]

BLAST of MC07g0599 vs. NCBI nr
Match: XP_022930415.1 (uncharacterized protein LOC111436870 [Cucurbita moschata])

HSP 1 Score: 79.7 bits (195), Expect = 3.27e-17
Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQKLPSVTATTTATDPESEDEKLK 60
          MF+KYFLLLLL VVLLTT+QAL+ P++S  EVIPV++QKLPS TAT T  +P SE E+ K
Sbjct: 1  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDT--EPASEHEESK 60

Query: 61 YYKNK-----PSSKHRPPYKK-PPYPYKIPSSN 87
          +Y+ +     P  K  PPYKK PPY    PSSN
Sbjct: 61 FYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN 91

[Close]

BLAST of MC07g0599 vs. NCBI nr
Match: XP_004147144.2 (repetitive proline-rich cell wall protein 3 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 1.37e-11
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQ---KLPSVTATTTATDPESEDE 60
          MFLKYFLLLLL VVLLTT+QAL+ P+ SN+EVIP TD    KLP     TT TDP  E  
Sbjct: 15 MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLP-----TTITDPNEES- 74

Query: 61 KLKYYKNKPSSKHRPPYKKPPY 79
            K+Y+    S ++ PYK+PPY
Sbjct: 75 --KFYRR--PSPYKKPYKRPPY 86

[Close]

BLAST of MC07g0599 vs. ExPASy TrEMBL
Match: A0A6J1EWV3 (uncharacterized protein LOC111436870 OS=Cucurbita moschata OX=3662 GN=LOC111436870 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.58e-17
Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQKLPSVTATTTATDPESEDEKLK 60
          MF+KYFLLLLL VVLLTT+QAL+ P++S  EVIPV++QKLPS TAT T  +P SE E+ K
Sbjct: 1  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDT--EPASEHEESK 60

Query: 61 YYKNK-----PSSKHRPPYKK-PPYPYKIPSSN 87
          +Y+ +     P  K  PPYKK PPY    PSSN
Sbjct: 61 FYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN 91

[Close]

BLAST of MC07g0599 vs. ExPASy TrEMBL
Match: A0A0A0LI79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.65e-12
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQ---KLPSVTATTTATDPESEDE 60
          MFLKYFLLLLL VVLLTT+QAL+ P+ SN+EVIP TD    KLP     TT TDP  E  
Sbjct: 15 MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLP-----TTITDPNEES- 74

Query: 61 KLKYYKNKPSSKHRPPYKKPPY 79
            K+Y+    S ++ PYK+PPY
Sbjct: 75 --KFYRR--PSPYKKPYKRPPY 86

[Close]

BLAST of MC07g0599 vs. ExPASy TrEMBL
Match: A0A5A7VEY7 (Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00050 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.99e-09
Identity = 44/90 (48.89%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQKLPSVTATTTATDPESEDE--- 60
          MFLKYFLLLLL  VLL+T+QAL+ P+ S++EVIP TD  +   T  TT  DP  E +   
Sbjct: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTD--VTQGTLPTTIADPNEESKFYR 60

Query: 61 ---------KLKYYKNKPSSKHRPPYKKPP 78
                   K   YK  P  K RPPYKK P
Sbjct: 61 RPFPYKKPYKRPPYKKYPPYKKRPPYKKYP 88

[Close]

BLAST of MC07g0599 vs. ExPASy TrEMBL
Match: A0A1S3CE34 (repetitive proline-rich cell wall protein 3-like OS=Cucumis melo OX=3656 GN=LOC103499417 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.99e-09
Identity = 44/90 (48.89%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQKLPSVTATTTATDPESEDE--- 60
          MFLKYFLLLLL  VLL+T+QAL+ P+ S++EVIP TD  +   T  TT  DP  E +   
Sbjct: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTD--VTQGTLPTTIADPNEESKFYR 60

Query: 61 ---------KLKYYKNKPSSKHRPPYKKPP 78
                   K   YK  P  K RPPYKK P
Sbjct: 61 RPFPYKKPYKRPPYKKYPPYKKRPPYKKYP 88

[Close]

BLAST of MC07g0599 vs. ExPASy TrEMBL
Match: Q8H0R6 (Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.41e-08
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1  MFLKYFLLLLLGVVLLTTSQALRIPTESNREVIPVTDQ---KLPSVTATTTATDPESEDE 60
          MF KYFLLLLL VVLLTT+QAL+ P  SN+E IP TD    KLP     TT TDP  E  
Sbjct: 1  MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLP-----TTITDPNEES- 60

Query: 61 KLKYYKNKPSSKHRPPYKKPPY 79
            K+++    S ++ PYK+PPY
Sbjct: 61 --KFFRR--PSPYKKPYKRPPY 72

The following BLAST results are available for this feature:

BLAST of MC07g0599 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g0599 vs. NCBI nr


Match Name	E-value	Identity	Description
POE15980.1	8.28e-18	58.70	hypothetical protein BV923_23575 [Pectobacterium odoriferum]	[more]
WP_219729224.1	9.73e-18	58.70	hypothetical protein, partial [Pectobacterium odoriferum]	[more]
XP_023513909.1	1.14e-17	59.14	repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo] >K...	[more]
XP_022930415.1	3.27e-17	59.14	uncharacterized protein LOC111436870 [Cucurbita moschata]	[more]
XP_004147144.2	1.37e-11	57.32	repetitive proline-rich cell wall protein 3 [Cucumis sativus]	[more]

BLAST of MC07g0599 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWV3	1.58e-17	59.14	uncharacterized protein LOC111436870 OS=Cucurbita moschata OX=3662 GN=LOC1114368...	[more]
A0A0A0LI79	6.65e-12	57.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1	[more]
A0A5A7VEY7	9.99e-09	48.89	Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CE34	9.99e-09	48.89	repetitive proline-rich cell wall protein 3-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
Q8H0R6	1.41e-08	53.66	Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1	[more]

BLAST of MC07g0599 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0599.1	MC07g0599.1	mRNA