MC07g0560 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0560
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionmitochondrial import receptor subunit TOM9-2-like
LocationMC07: 13664845 .. 13665594 (+)
RNA-Seq ExpressionMC07g0560
SyntenyMC07g0560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTCGTGGTAATAAGCGAGCTTCTCTTACCAACGGCGACGAGAATTCAGGCGTCCTGTCTAGGGTTTCCCGTTCTGTCTCCGATTCCCAAATCGTCCGGCGAGCCAAAAGCACGGCTTCCGACGCTGCATTCGTTACCCAAAAGCTCCTCCGTAGCACCGGTAGAGCTGCGTGGATTGCCGGGACGACATTTCTCATCCTGGTGGTGCCGTTAATCATTGAAATGGATCGCGAGCAGCAGTTCAACGAGCTCGAGATGCAGCAGGCGAGTCTACTTGGTACCCCGGCCACCGCTGCTCCCAAGTGATTTGATTTGGTTTACTCGACGCCATCAGGTTAAGGCTACTCGATGATATGTTGTTGATGGTTTAGGGTTTTTTTCCTTGGATTTTGGATGGAATTTGATTATGGAATATGGATGAGCTAGTATGTCGTGTACCTCTATTCCTTTGTTTGTGACTGCCGATAAAATGTGATGTTGCTCAGGTTTAGAGATTGAGGCTTTAGAGAGTTAGGGTTATGTTGCAAAATTATATGAATTGTATTCAGAATCAATTGAAATTTTCTTCTACTCAAGAAGTTATTGCTTGCTGTTGTAAACTTAGTTTATGATTGTTTCCTCTTGGTGGGAAATTGCTTGATGCCTAGAAATCAGCTGAAAAAGCATTGCACGTTCATTGTTTTCAAGCACTACGAATCGATTGTTTCCTTGGTGAATTGACTTTCATGAAATCCTACGTTCATT

mRNA sequence

ATGGCGTCTCGTGGTAATAAGCGAGCTTCTCTTACCAACGGCGACGAGAATTCAGGCGTCCTGTCTAGGGTTTCCCGTTCTGTCTCCGATTCCCAAATCGTCCGGCGAGCCAAAAGCACGGCTTCCGACGCTGCATTCGTTACCCAAAAGCTCCTCCGTAGCACCGGTAGAGCTGCGTGGATTGCCGGGACGACATTTCTCATCCTGGTGGTGCCGTTAATCATTGAAATGGATCGCGAGCAGCAGTTCAACGAGCTCGAGATGCAGCAGGCGAGTCTACTTGGTACCCCGGCCACCGCTGCTCCCAAGTGATTTGATTTGGTTTACTCGACGCCATCAGGTTAAGGCTACTCGATGATATGTTGTTGATGGTTTAGGGTTTTTTTCCTTGGATTTTGGATGGAATTTGATTATGGAATATGGATGAGCTAGTATGTCGTGTACCTCTATTCCTTTGTTTGTGACTGCCGATAAAATGTGATGTTGCTCAGGTTTAGAGATTGAGGCTTTAGAGAGTTAGGGTTATGTTGCAAAATTATATGAATTGTATTCAGAATCAATTGAAATTTTCTTCTACTCAAGAAGTTATTGCTTGCTGTTGTAAACTTAGTTTATGATTGTTTCCTCTTGGTGGGAAATTGCTTGATGCCTAGAAATCAGCTGAAAAAGCATTGCACGTTCATTGTTTTCAAGCACTACGAATCGATTGTTTCCTTGGTGAATTGACTTTCATGAAATCCTACGTTCATT

Coding sequence (CDS)

ATGGCGTCTCGTGGTAATAAGCGAGCTTCTCTTACCAACGGCGACGAGAATTCAGGCGTCCTGTCTAGGGTTTCCCGTTCTGTCTCCGATTCCCAAATCGTCCGGCGAGCCAAAAGCACGGCTTCCGACGCTGCATTCGTTACCCAAAAGCTCCTCCGTAGCACCGGTAGAGCTGCGTGGATTGCCGGGACGACATTTCTCATCCTGGTGGTGCCGTTAATCATTGAAATGGATCGCGAGCAGCAGTTCAACGAGCTCGAGATGCAGCAGGCGAGTCTACTTGGTACCCCGGCCACCGCTGCTCCCAAGTGA

Protein sequence

MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAWIAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK
Homology
BLAST of MC07g0560 vs. ExPASy Swiss-Prot
Match: Q9FNC9 (Mitochondrial import receptor subunit TOM9-2 OS=Arabidopsis thaliana OX=3702 GN=TOM9-2 PE=1 SV=3)

HSP 1 Score: 97.8 bits (242), Expect = 7.5e-20
Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 0

Query: 13 NGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAWIAGTTFLILVVP 72
          +G  +  +L+R    +S+S+IV + +  A DA  V++KLLRSTG+AAWIAGTTFLILVVP
Sbjct: 11 SGGGDPNILAR----ISNSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTTFLILVVP 70

Query: 73 LIIEMDREQQFNELEMQQASLLGTP 98
          LIIEMDRE Q NE+E+QQASLLG P
Sbjct: 71 LIIEMDREAQINEIELQQASLLGAP 91

BLAST of MC07g0560 vs. ExPASy Swiss-Prot
Match: O64497 (Mitochondrial import receptor subunit TOM9-1 OS=Arabidopsis thaliana OX=3702 GN=TOM9-1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.5e-16
Identity = 41/80 (51.25%), Postives = 60/80 (75.00%), Query Frame = 0

Query: 22  SRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAWIAGTTFLILVVPLIIEMDREQ 81
           S +   +S+  IV + +  A DA +V++KLL+STG+AAWIAGTTFLIL VPLI+E++++ 
Sbjct: 13  SSILAKISNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFLILAVPLILELEQDH 72

Query: 82  QFNELEMQQASLLGTPATAA 102
           +  E++ +QASLLGTP   A
Sbjct: 73  RLGEIDFEQASLLGTPPVGA 92

BLAST of MC07g0560 vs. NCBI nr
Match: XP_022138842.1 (mitochondrial import receptor subunit TOM9-2-like [Momordica charantia])

HSP 1 Score: 189 bits (481), Expect = 2.36e-60
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW
Sbjct: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK
Sbjct: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103

BLAST of MC07g0560 vs. NCBI nr
Match: XP_023548768.1 (mitochondrial import receptor subunit TOM9-2-like [Cucurbita pepo subsp. pepo] >KAG6574890.1 Mitochondrial import receptor subunit TOM9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013462.1 Mitochondrial import receptor subunit TOM9-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181 bits (460), Expect = 3.76e-57
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKR S+T+GDEN GVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTG+AAW
Sbjct: 1   MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK
Sbjct: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103

BLAST of MC07g0560 vs. NCBI nr
Match: XP_022959104.1 (mitochondrial import receptor subunit TOM9-2-like [Cucurbita moschata])

HSP 1 Score: 181 bits (460), Expect = 1.44e-56
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKR S+T+GDEN GVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTG+AAW
Sbjct: 43  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 102

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK
Sbjct: 103 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 145

BLAST of MC07g0560 vs. NCBI nr
Match: XP_023006088.1 (mitochondrial import receptor subunit TOM9-2-like [Cucurbita maxima])

HSP 1 Score: 181 bits (460), Expect = 1.69e-56
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKR S+T+GDEN GVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTG+AAW
Sbjct: 48  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 107

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK
Sbjct: 108 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 150

BLAST of MC07g0560 vs. NCBI nr
Match: XP_038875758.1 (mitochondrial import receptor subunit TOM9-2-like [Benincasa hispida])

HSP 1 Score: 179 bits (454), Expect = 3.09e-56
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKR S+TNGD+N GVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTG+AAW
Sbjct: 1   MASRGNKRPSITNGDDNLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAA K
Sbjct: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAASK 103

BLAST of MC07g0560 vs. ExPASy TrEMBL
Match: A0A6J1CCC4 (mitochondrial import receptor subunit TOM9-2-like OS=Momordica charantia OX=3673 GN=LOC111009913 PE=3 SV=1)

HSP 1 Score: 189 bits (481), Expect = 1.14e-60
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW
Sbjct: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK
Sbjct: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103

BLAST of MC07g0560 vs. ExPASy TrEMBL
Match: A0A6J1H712 (mitochondrial import receptor subunit TOM9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111460199 PE=3 SV=1)

HSP 1 Score: 181 bits (460), Expect = 6.95e-57
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKR S+T+GDEN GVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTG+AAW
Sbjct: 43  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 102

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK
Sbjct: 103 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 145

BLAST of MC07g0560 vs. ExPASy TrEMBL
Match: A0A6J1L3Y9 (mitochondrial import receptor subunit TOM9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111498936 PE=3 SV=1)

HSP 1 Score: 181 bits (460), Expect = 8.16e-57
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKR S+T+GDEN GVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTG+AAW
Sbjct: 48  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 107

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK
Sbjct: 108 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 150

BLAST of MC07g0560 vs. ExPASy TrEMBL
Match: A0A5D3CY80 (Mitochondrial import receptor subunit TOM9-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00090 PE=3 SV=1)

HSP 1 Score: 174 bits (441), Expect = 1.44e-54
Identity = 93/103 (90.29%), Postives = 99/103 (96.12%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKR S+TNGD+N G+LSRVSRSVSDSQIVRRAKSTASDAAFV++KLLRSTG+AAW
Sbjct: 1   MASRGNKRPSITNGDDNLGILSRVSRSVSDSQIVRRAKSTASDAAFVSKKLLRSTGKAAW 60

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATA  K
Sbjct: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAGSK 103

BLAST of MC07g0560 vs. ExPASy TrEMBL
Match: A0A0A0LNL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171830 PE=3 SV=1)

HSP 1 Score: 174 bits (441), Expect = 1.44e-54
Identity = 93/103 (90.29%), Postives = 99/103 (96.12%), Query Frame = 0

Query: 1   MASRGNKRASLTNGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAW 60
           MASRGNKR S+TNGD+N G+LSRVSRSVSDSQIVRRAKSTASDAAFV++KLLRSTG+AAW
Sbjct: 1   MASRGNKRPSITNGDDNLGILSRVSRSVSDSQIVRRAKSTASDAAFVSKKLLRSTGKAAW 60

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAAPK 103
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATA  K
Sbjct: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLGTPATAGSK 103

BLAST of MC07g0560 vs. TAIR 10
Match: AT5G43970.1 (translocase of outer membrane 22-V )

HSP 1 Score: 97.8 bits (242), Expect = 5.3e-21
Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 0

Query: 13 NGDENSGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAWIAGTTFLILVVP 72
          +G  +  +L+R    +S+S+IV + +  A DA  V++KLLRSTG+AAWIAGTTFLILVVP
Sbjct: 11 SGGGDPNILAR----ISNSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTTFLILVVP 70

Query: 73 LIIEMDREQQFNELEMQQASLLGTP 98
          LIIEMDRE Q NE+E+QQASLLG P
Sbjct: 71 LIIEMDREAQINEIELQQASLLGAP 91

BLAST of MC07g0560 vs. TAIR 10
Match: AT1G04070.1 (translocase of outer membrane 22-I )

HSP 1 Score: 84.7 bits (208), Expect = 4.7e-17
Identity = 41/80 (51.25%), Postives = 60/80 (75.00%), Query Frame = 0

Query: 22  SRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGRAAWIAGTTFLILVVPLIIEMDREQ 81
           S +   +S+  IV + +  A DA +V++KLL+STG+AAWIAGTTFLIL VPLI+E++++ 
Sbjct: 13  SSILAKISNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFLILAVPLILELEQDH 72

Query: 82  QFNELEMQQASLLGTPATAA 102
           +  E++ +QASLLGTP   A
Sbjct: 73  RLGEIDFEQASLLGTPPVGA 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FNC97.5e-2062.35Mitochondrial import receptor subunit TOM9-2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
O644976.5e-1651.25Mitochondrial import receptor subunit TOM9-1 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Match NameE-valueIdentityDescription
XP_022138842.12.36e-60100.00mitochondrial import receptor subunit TOM9-2-like [Momordica charantia][more]
XP_023548768.13.76e-5795.15mitochondrial import receptor subunit TOM9-2-like [Cucurbita pepo subsp. pepo] >... [more]
XP_022959104.11.44e-5695.15mitochondrial import receptor subunit TOM9-2-like [Cucurbita moschata][more]
XP_023006088.11.69e-5695.15mitochondrial import receptor subunit TOM9-2-like [Cucurbita maxima][more]
XP_038875758.13.09e-5694.17mitochondrial import receptor subunit TOM9-2-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1CCC41.14e-60100.00mitochondrial import receptor subunit TOM9-2-like OS=Momordica charantia OX=3673... [more]
A0A6J1H7126.95e-5795.15mitochondrial import receptor subunit TOM9-2-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1L3Y98.16e-5795.15mitochondrial import receptor subunit TOM9-2-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A5D3CY801.44e-5490.29Mitochondrial import receptor subunit TOM9-2-like OS=Cucumis melo var. makuwa OX... [more]
A0A0A0LNL31.44e-5490.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171830 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G43970.15.3e-2162.35translocase of outer membrane 22-V [more]
AT1G04070.14.7e-1751.25translocase of outer membrane 22-I [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017411Mitochondrial outer membrane translocase complex, subunit Tom22, plantPIRSFPIRSF038151TOM9-2_plantcoord: 1..103
e-value: 1.4E-38
score: 128.7
IPR017411Mitochondrial outer membrane translocase complex, subunit Tom22, plantPANTHERPTHR46867MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM9-2coord: 1..103
IPR005683Mitochondrial import receptor subunit Tom22PFAMPF04281Tom22coord: 38..90
e-value: 2.1E-7
score: 30.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePANTHERPTHR46867:SF6MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM9-2-LIKEcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0560.1MC07g0560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005741 mitochondrial outer membrane