MC07g0508 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0508
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Actin-related protein 2/3 complex subunit 4
Location	MC07: 13118516 .. 13123788 (-)
RNA-Seq Expression	MC07g0508
Synteny	MC07g0508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGTGTCAGTGCCCGAACCGAACCGATGAACCGATTCAATTCGGTTCGGTTCTCAGAGACCGAATAAAGAGAATTTGCAATACTGCGCTGCCTGCCCTGCTGCCCTCTCTGTCTCAAGTTTCAACAACCCACAAGTTTTATCTCTCTTTCTCTCAACAAATCGATTTCTCACTCTCGACAAAATCCGTTCTCTGTCTCTCAAGGCGGCCAACCTTCCGACGGAGAATCCGACGATATCCAAACAAATCTAAGAAACCCACGACGGCGATTCCAACCTTCCGATTGAAGGATTTGGATTTTGGATCTGGAAACTGTTGCAAAATAAGGTGTGCATTACATCTTCCATTAATTGAAACAAAAAATTGTTAATTAAACGTTTTTTTCTTTTTTTTTTTTCTGTCACGAAGGTGAAATTGGTGTTACTGAAAGAAAAAAAAAAGGTGACCCGACCCGAACTGTAATCGACTAATTACGCCCCAAAATTATTAAAAATCGAAATTATTAGGAGAAAATGGTACTGTAACTTATGTTTTAAGTTTGGTATTTTTTATAATATAATTCACCCAATGTTCGTCGATCCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTCGTTTGCAGCTTAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCAGATTTTTTTCTTGTTATTTTATTTTTTTGAGAAGTAAGTGCATTAATCAGTTTTTGAACAACATTGGATTTGAAAGGCAGGAAGGGAAATTATCGATCCAATTCCACTCCTCCTAGACAGCACTGTTCATCGGCTACTACGTTGCGCACTGTTAATTTCTCTTCTCATCCACGGGCCCAAATAAATTTAAGTTAGGTCAGAATCTGTGTTGTTCGATACACGAATTGTTTCAAAGGAATCGGATTCCAGGTAAAGGGTTGCTTGTAAATTGTAATCCTCTGCAAATACCCAAGATTTTCAAGGGTTTTAACATCCCTTTGTTCTTTGATGTTGCAGCACCCGGCTTTCATAGTCTCGCCAATTGCCACCTCCGCCGGCGTCGGACGCAGGGAGCTTGATCTTTGCTCTACATAAAATGGTGGGTAACAAACAATTCTTGTCTCTGTTGATCTTTGCTCTTTCTAAAGTTGTTTTGAATAATTAGAAGATCGTTGCTAATGGAGTTCATTTGTTTTAACTTAGCGATGTCCGATTTAACTTATTTTTATAGTGAAATTGATGGTGGTAATGGACATGGAACAATTCGAGATTCAGTGTTTTGCGGATTTCTTCATAGTATCGAAGGAAGCTGGCTTTGCTCCCATATGTTTTTTGACTTTTGATCATGTGTTTGGCTTCAGTAATTTTTTGTCAAAATGAGATTGTTCTTTTGTCTTGTTTTCTATCCTGATTTTTCTTTCTGTATGTGAAAACTCAGGCAAACACTTTGCGCTTGTATTTGACGTGCATACGGAACACTCTTGAGGCTGCGATGTGCCTTCAGGTATATCTGTCATCGTCGTGTTGTTGCTTCGATTTAATTTCGGTTATGAGTGCAGTTATTTGTATTTTGTTATATTATTTTTCGAATCAAACTTATTAGATTCTGTAAAATAGTTTGTCCTTGAATACCTGAGAGCTACGTCAACTGACTTTTCATTCTATGGATTATTGGCGTTAGAATATGAAGAATGCAATGTTAAGCCGAACACATTGTTTGTATTTGTTTCTTGCTGAATATACATAGATGTGTAAGTGAGTGGAAATACTTCTTTACGTTTCGCTAGGTTTTCTTAATTTCCATCCAAAGTGCAAACATTCATTAAATAAAATGTTAATTTGTCATAATAAATCTAGAGAGTGCCATGCTTTTAGTATTTTTAGTCACGAAGAGGTCAAAAATACTTTCTAATTTATACTTCTTGTTGAAGGAGAAAGAAGTCATTGAATTCTAATATTGAGTTCTCTCTTCTGCTTACACTTCGCATTATTTGTCTTGGAGAAACTTCATAGATAGTCAGGTGGCTTAAGTGGTCGAACTCGAATATCCCTCTAGGCTCCAAGTTAACAGTGTGTACGTTAAGAGTAGTGAATATCAGTATTCTCGAGTAGTAAGTACATTGAGTTGAGAGTGAATGAAGTGCAAACCTATGAATGACCGGTTATATTTTTGTATGGTGTTCCTCCACTTTCTATTTCTTGAAATCATTGATTACTCTGGATATTTGCTCTAATATAAATATCCTTGGTTGTCTAACTTACTTCAACATATTTATAACGTTTGATTTGTCAAAAAAAAAAAAATTTCCACATAATTGCAGAATTTTCCTTGTCAAGAAGTTGAAAGACATAACAAGCCAGAGGTTGAACTAAAGTATGGTTTTGTCTCTCGTACATTTTAAAACTTCTTACTATAATTATTTTAGATATATCATTGTTTGTGAGCCATTGGTGACCCGAGTTGCCTGGTTAATGATTTCATTAATATGCACCATTGCGAACATTCTTGAGGTCACTGTATGAAAAATCTCGACACAGCCTTGTGAAGTTTATACAAAGCAATTGAACTAGGGAACTTTTAGTCATCGGCTCTTTTGGTTATCTGGTAGTTGTTCGCTTATCAATATTGCGTAGGGGTGTAATATTGTGATTATCTTTCTTTTATATAAATCATTTCGGTTACTTCTTAGCTTTACTGTTACGTGTTATGTCTTTTAAATGCGTTTTCTCATTGGTTGGTTTATTTCAACTAAGCCCCAGCTTGTATTGGTTAGTTTAACATGTTGTTGATAATTGGTTAATAACTACCTGTCTTAGTGACTTGTATGAATACCTGCCATGCTACTGGGTAAGCAGATAAATAAGGACTACTTTTTAGAAAGGCTAAGTATATTGTTCTTGAAATATTGTTAGTTTCTTGTTTACCCCATGCTAATTATTTTATTGTTTTTCCTCTTCCAGGACCAGCCCGGAACTTCTTCTCAATCCTGTAAGATCCCTTTACAGCTTAGATTTCCTATTTGACGGTTGCCATTTCCATCATTAAATGCCATTGTGCTTGGCAATTTACCATTTGTTGATGTCGTTTTTTCTCCTTTTAATTGGAGAATCATGGGCATGCAAAAAACATTCTTAGGAGTTAGGGTGCAGTCGGGGAATGACTTCTATACGTTTATATAACAGTGATATGTTGATGGACATCTATGATCCTTTAATGTTTTGCTCTTGCAGATCTCAATATGTAGAAATGAATCAGAGAAGTGTTTGATTGAGACATCTATAAACTCACTTCGCATAAGTCTCAAGGTGATTTTATTTTCTTCTTACTTTTAATCTTTTGGCAATAGACTTGAAGGTGAATTTTGAGGAATTTTGTTTCTATGCTTTGCTGATACTGATAAGGCGATAAAGAGAGAGGTACCTTTGTTCTGTGGGGCCATTTTTTTTCGGCTTAAAATGCTCCTTTGAATTGGAGTTAGTAATTTAGAATGTTTTTCATGGATTGAGTTGAGTTCTTAATATTGTAGACAGTTAATCACTAGGCTATGCATATTATTGATGTATAAGCGGAAAAGTGGACACTTACGTCTAAGAGGGTACTTCATAGTTGTATGTTTTTGATTCTTGGTCATCTTTTTAACATTTAGTCATTGGTTGGGTTCGTCCCGAAGGTTTAACTTCAACCTTGAAGGGCATATGTACTCCCTTTTCCATCCATTCAATTACTTAGGCTAATTCTTTTGATCCTGTCTAGCTTAGCTGAAGAAACACGGCTGAATGTCTGAGATATTTATTACAGATCACCATCAACTTATTCACAATTATCTTATGCTCGAACTCTTTCTTGTGCATAGGTTAAGCAGACAGATGAACTGGAGAACATTTTAACTAAGAAGTTCCTTCGATTTTTGTCAATGCGGGCAGAAGCTTTTAAGGTTCTGAGACGAAAACCCGTACAGGTATTGAGAGTTTCGAATCATGAAGTTAACTTTATGCTTAAATTTAATATAATATATTCAAGAAACTAATTGAGGGAAAACTGTAATGTGAGTTCTAGGTTCATCTTTGTGGTATAGAGAGATAAGAGACGTTCTCCAATTACTTTTATTATCAGAGTGGTTGGAACAATATAAAACTGTACCCATAATCACGTATGGTGAAACCTTTTAACGACACTATTTGTGTCTACGTAACTTAGTTACTGTGGTCTTGGGATTGACCTACCCTTAGTTTGTCTTTTCAAGAGAGAATTTTCTCAATAAGCATTAGATTGTTGTGGTGTCAAATATTTATGGCCACTGGTCAGGCATGTCTTGCCTTGAACTTTTAAAGATTCTGGATTAAGCATGGTTTTAGTAATGTTAAAGTCCTGTCTCATTTCTTTCTCTTTTCTTTTTCCTCAAAGCTAAAGTGAATAATAGCATGAGCCTCTAATATCATGAATCTTGTCACGCATAAGAGTTTTTCAGAATATTAATCTTTTGTTTCCTTTCGGCTTCATTTAACAGGGATATGATATTAGCTTTCTCATCACAAACTATCACTGTGAGGAGTTGCAGAAGCAGAGACTCATTGATTTCATTGTACAATTCATGGAGGCAAGAATTTTATCACCATCACATACATTTTTTCGGATTTTTTTTACTTGATTGCATCTTATTCAACTTAATTTTCTACATGATTTTTGCACCTGTCGTCCTACTATGCAATCTGCTCTTCTTAATTTACCTGTTCGAACAAATTAACCGTACTCTTTATGTATGCTGTTTTCTTTTCTGGGCTAGCCACAGACATACATTATTTCAGAAGCTTTCTTGAGCTAGTACAACAATCTTGTTTGTTTTGTTCCACGTGCAGGATATTGATAAAGAGATCAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTCGTAGCATCAGAGTTTCTAAAGCAATTCACTTGACGTCTCTAGTATAATACTAGTATCTTGGTAAAACTTCAATTCTCTCTGAGTATTTCCTCGAGGTTATTCTGTTTCTGCTTGTTGTGCATAGCCTTCTACTCTATTATATTAGAGAGAGAAAATTCATTGTAGGTAAAGATGACAGTAGCATGGAGCGGGAGTGAGGATGTTCTTTCCCATTCTTGAAAATTTTTAGTCCCTCATCTCCATTTTGTTTTTTGGTTTGGGGATTGAAAATTTGAATCCATAATTTATTCTTTCAACTAAATAAAAACATGTCAATATGAGCATAGTTGAGCGGTAATTGACATATATCATCTCTGACCAAGAGGTCATGACTTCA

mRNA sequence

GGGGTGTCAGTGCCCGAACCGAACCGATGAACCGATTCAATTCGGTTCGGTTCTCAGAGACCGAATAAAGAGAATTTGCAATACTGCGCTGCCTGCCCTGCTGCCCTCTCTGTCTCAAGTTTCAACAACCCACAAGTTTTATCTCTCTTTCTCTCAACAAATCGATTTCTCACTCTCGACAAAATCCGTTCTCTGTCTCTCAAGGCGGCCAACCTTCCGACGGAGAATCCGACGATATCCAAACAAATCTAAGAAACCCACGACGGCGATTCCAACCTTCCGATTGAAGGATTTGGATTTTGGATCTGGAAACTGTTGCAAAATAAGCTCAGTTGGTAGAGCGGAGGACTGTAGTCGTTTGCAGCTTAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGAAGGGAAATTATCGATCCAATTCCACTCCTCCTAGACAGCACTGTTCATCGGCTACTACGTTGCGCACTGTTAATTTCTCTTCTCATCCACGGGCCCAAATAAATTTAAGTTAGGTCAGAATCTGTGTTGTTCGATACACGAATTGTTTCAAAGGAATCGGATTCCAGCACCCGGCTTTCATAGTCTCGCCAATTGCCACCTCCGCCGGCGTCGGACGCAGGGAGCTTGATCTTTGCTCTACATAAAATGGCAAACACTTTGCGCTTGTATTTGACGTGCATACGGAACACTCTTGAGGCTGCGATGTGCCTTCAGAATTTTCCTTGTCAAGAAGTTGAAAGACATAACAAGCCAGAGGTTGAACTAAAGACCAGCCCGGAACTTCTTCTCAATCCTATCTCAATATGTAGAAATGAATCAGAGAAGTGTTTGATTGAGACATCTATAAACTCACTTCGCATAAGTCTCAAGGTTAAGCAGACAGATGAACTGGAGAACATTTTAACTAAGAAGTTCCTTCGATTTTTGTCAATGCGGGCAGAAGCTTTTAAGGTTCTGAGACGAAAACCCGTACAGGGATATGATATTAGCTTTCTCATCACAAACTATCACTGTGAGGAGTTGCAGAAGCAGAGACTCATTGATTTCATTGTACAATTCATGGAGGATATTGATAAAGAGATCAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTCGTAGCATCAGAGTTTCTAAAGCAATTCACTTGACGTCTCTAGTATAATACTAGTATCTTGGTAAAGATGACAGTAGCATGGAGCGGGAGTGAGGATGTTCTTTCCCATTCTTGAAAATTTTTAGTCCCTCATCTCCATTTTGTTTTTTGGTTTGGGGATTGAAAATTTGAATCCATAATTTATTCTTTCAACTAAATAAAAACATGTCAATATGAGCATAGTTGAGCGGTAATTGACATATATCATCTCTGACCAAGAGGTCATGACTTCA

Coding sequence (CDS)

ATGGCAAACACTTTGCGCTTGTATTTGACGTGCATACGGAACACTCTTGAGGCTGCGATGTGCCTTCAGAATTTTCCTTGTCAAGAAGTTGAAAGACATAACAAGCCAGAGGTTGAACTAAAGACCAGCCCGGAACTTCTTCTCAATCCTATCTCAATATGTAGAAATGAATCAGAGAAGTGTTTGATTGAGACATCTATAAACTCACTTCGCATAAGTCTCAAGGTTAAGCAGACAGATGAACTGGAGAACATTTTAACTAAGAAGTTCCTTCGATTTTTGTCAATGCGGGCAGAAGCTTTTAAGGTTCTGAGACGAAAACCCGTACAGGGATATGATATTAGCTTTCTCATCACAAACTATCACTGTGAGGAGTTGCAGAAGCAGAGACTCATTGATTTCATTGTACAATTCATGGAGGATATTGATAAAGAGATCAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTCGTAGCATCAGAGTTTCTAAAGCAATTCACTTGA

Protein sequence

MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQFT

Homology

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BLAST of MC07g0508 vs. ExPASy Swiss-Prot
Match: F4JUL9 (Actin-related protein 2/3 complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=ARPC4 PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.9e-82
Identity = 152/168 (90.48%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MAN+LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EK
Sbjct: 1   MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 169
           YHCEE+QKQ+LIDFI+QFMEDI+KEI +LK SVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEEMQKQKLIDFIIQFMEDIEKEIRDLKESVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. ExPASy Swiss-Prot
Match: O96625 (Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=arcD PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-58
Identity = 109/161 (67.70%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 8   YLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEKCLIETSI 67
           YL CIRNTL A+MCLQNF  Q VERHNKPEVE+KTS EL+LNP+ I RN++E+ LIETSI
Sbjct: 8   YLNCIRNTLTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNERVLIETSI 67

Query: 68  NSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQ 127
           NS+RIS+ +K++DE++ IL KKF+RFL  RAE F +LRRKPV+GYDISFL+TN+H E + 
Sbjct: 68  NSIRISVSIKKSDEVDVILAKKFVRFLQQRAENFIILRRKPVEGYDISFLVTNFHTENMF 127

Query: 128 KQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 169
           K +L+DFI+QFMEDID+EIS+LK+++N RGR+VASE+LK F
Sbjct: 128 KHKLVDFIIQFMEDIDREISDLKLTLNARGRIVASEYLKNF 168

[Close]

BLAST of MC07g0508 vs. ExPASy Swiss-Prot
Match: Q148J6 (Actin-related protein 2/3 complex subunit 4 OS=Bos taurus OX=9913 GN=ARPC4 PE=1 SV=3)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-57
Identity = 109/168 (64.88%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           M  TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P++I RNE EK
Sbjct: 1   MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
            LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 169
           +H E++ K +L+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]

BLAST of MC07g0508 vs. ExPASy Swiss-Prot
Match: P59998 (Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens OX=9606 GN=ARPC4 PE=1 SV=3)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-57
Identity = 109/168 (64.88%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           M  TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P++I RNE EK
Sbjct: 1   MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
            LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 169
           +H E++ K +L+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]

BLAST of MC07g0508 vs. ExPASy Swiss-Prot
Match: P59999 (Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=1 SV=3)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-57
Identity = 109/168 (64.88%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           M  TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P++I RNE EK
Sbjct: 1   MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
            LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 169
           +H E++ K +L+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]

BLAST of MC07g0508 vs. NCBI nr
Match: XP_022138538.1 (actin-related protein 2/3 complex subunit 4-like isoform X1 [Momordica charantia] >XP_022138540.1 actin-related protein 2/3 complex subunit 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 333 bits (853), Expect = 5.91e-115
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQFT 169
           YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQFT
Sbjct: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQFT 169

[Close]

BLAST of MC07g0508 vs. NCBI nr
Match: XP_022157804.1 (actin-related protein 2/3 complex subunit 4 isoform X1 [Momordica charantia] >XP_022157805.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Momordica charantia] >XP_022157806.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Momordica charantia] >XP_022157807.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Momordica charantia])

HSP 1 Score: 327 bits (839), Expect = 8.07e-113
Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPEL+LNPISICRNESEK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELILNPISICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 168
           YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. NCBI nr
Match: XP_022722959.1 (actin-related protein 2/3 complex subunit 4 isoform X1 [Durio zibethinus])

HSP 1 Score: 320 bits (821), Expect = 4.48e-110
Identity = 160/168 (95.24%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 168
           YHCEE+QKQ+LIDFIVQFMEDIDKEISELKMSVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. NCBI nr
Match: XP_007034310.1 (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Theobroma cacao] >XP_020215469.1 actin-related protein 2/3 complex subunit 4 [Cajanus cajan] >XP_022733788.1 actin-related protein 2/3 complex subunit 4 [Durio zibethinus] >XP_022733789.1 actin-related protein 2/3 complex subunit 4 [Durio zibethinus] >EOY05236.1 Binding isoform 1 [Theobroma cacao])

HSP 1 Score: 320 bits (821), Expect = 4.48e-110
Identity = 160/168 (95.24%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 168
           YHCEE+QKQ+LIDFIVQFMEDIDKEISELKMSVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. NCBI nr
Match: PSS23954.1 (Actin-related protein 2/3 complex subunit 4, partial [Actinidia chinensis var. chinensis])

HSP 1 Score: 320 bits (819), Expect = 8.74e-110
Identity = 159/167 (95.21%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 2   ANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEKC 61
           ANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EKC
Sbjct: 1   ANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKC 60

Query: 62  LIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNY 121
           LIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNY
Sbjct: 61  LIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNY 120

Query: 122 HCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 168
           HCEE+QKQ+LIDFIVQFMEDIDKEISELK+SVNTRGRLVA+EFLKQF
Sbjct: 121 HCEEMQKQKLIDFIVQFMEDIDKEISELKLSVNTRGRLVATEFLKQF 167

[Close]

BLAST of MC07g0508 vs. ExPASy TrEMBL
Match: A0A6J1C9Q5 (Actin-related protein 2/3 complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC111009679 PE=3 SV=1)

HSP 1 Score: 333 bits (853), Expect = 2.86e-115
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQFT 169
           YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQFT
Sbjct: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQFT 169

[Close]

BLAST of MC07g0508 vs. ExPASy TrEMBL
Match: A0A6J1DXL4 (Actin-related protein 2/3 complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC111024424 PE=3 SV=1)

HSP 1 Score: 327 bits (839), Expect = 3.91e-113
Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPEL+LNPISICRNESEK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELILNPISICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 168
           YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. ExPASy TrEMBL
Match: A0A6P5Y065 (Actin-related protein 2/3 complex subunit 4 OS=Durio zibethinus OX=66656 GN=LOC111287465 PE=3 SV=1)

HSP 1 Score: 320 bits (821), Expect = 2.17e-110
Identity = 160/168 (95.24%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 168
           YHCEE+QKQ+LIDFIVQFMEDIDKEISELKMSVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. ExPASy TrEMBL
Match: A0A061EK66 (Actin-related protein 2/3 complex subunit 4 OS=Theobroma cacao OX=3641 GN=TCM_020286 PE=3 SV=1)

HSP 1 Score: 320 bits (821), Expect = 2.17e-110
Identity = 160/168 (95.24%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 168
           YHCEE+QKQ+LIDFIVQFMEDIDKEISELKMSVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. ExPASy TrEMBL
Match: A0A6P5X3M1 (Actin-related protein 2/3 complex subunit 4 OS=Durio zibethinus OX=66656 GN=LOC111280071 PE=3 SV=1)

HSP 1 Score: 320 bits (821), Expect = 2.17e-110
Identity = 160/168 (95.24%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 168
           YHCEE+QKQ+LIDFIVQFMEDIDKEISELKMSVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. TAIR 10
Match: AT4G14147.1 (protein binding )

HSP 1 Score: 305.4 bits (781), Expect = 2.8e-83
Identity = 152/168 (90.48%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MAN+LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EK
Sbjct: 1   MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFMEDIDKEISELKMSVNTRGRLVASEFLKQF 169
           YHCEE+QKQ+LIDFI+QFMEDI+KEI +LK SVNTRGRLVA+EFLKQF
Sbjct: 121 YHCEEMQKQKLIDFIIQFMEDIEKEIRDLKESVNTRGRLVATEFLKQF 168

[Close]

BLAST of MC07g0508 vs. TAIR 10
Match: AT4G14147.2 (protein binding )

HSP 1 Score: 261.9 bits (668), Expect = 3.5e-70
Identity = 129/140 (92.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPISICRNESEK 60
           MAN+LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP+ ICRNE+EK
Sbjct: 1   MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEELQKQRLIDFIVQFME 141
           YHCEE+QKQ+LIDFI+QFME
Sbjct: 121 YHCEEMQKQKLIDFIIQFME 140

The following BLAST results are available for this feature:

BLAST of MC07g0508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JUL9	3.9e-82	90.48	Actin-related protein 2/3 complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
O96625	1.3e-58	67.70	Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum OX=44689...	[more]
Q148J6	1.1e-57	64.88	Actin-related protein 2/3 complex subunit 4 OS=Bos taurus OX=9913 GN=ARPC4 PE=1 ...	[more]
P59998	1.1e-57	64.88	Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens OX=9606 GN=ARPC4 PE=...	[more]
P59999	1.1e-57	64.88	Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE...	[more]

BLAST of MC07g0508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138538.1	5.91e-115	100.00	actin-related protein 2/3 complex subunit 4-like isoform X1 [Momordica charantia...	[more]
XP_022157804.1	8.07e-113	98.21	actin-related protein 2/3 complex subunit 4 isoform X1 [Momordica charantia] >XP...	[more]
XP_022722959.1	4.48e-110	95.24	actin-related protein 2/3 complex subunit 4 isoform X1 [Durio zibethinus]	[more]
XP_007034310.1	4.48e-110	95.24	PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Theobroma cac...	[more]
PSS23954.1	8.74e-110	95.21	Actin-related protein 2/3 complex subunit 4, partial [Actinidia chinensis var. c...	[more]

BLAST of MC07g0508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C9Q5	2.86e-115	100.00	Actin-related protein 2/3 complex subunit 4 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DXL4	3.91e-113	98.21	Actin-related protein 2/3 complex subunit 4 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6P5Y065	2.17e-110	95.24	Actin-related protein 2/3 complex subunit 4 OS=Durio zibethinus OX=66656 GN=LOC1...	[more]
A0A061EK66	2.17e-110	95.24	Actin-related protein 2/3 complex subunit 4 OS=Theobroma cacao OX=3641 GN=TCM_02...	[more]
A0A6P5X3M1	2.17e-110	95.24	Actin-related protein 2/3 complex subunit 4 OS=Durio zibethinus OX=66656 GN=LOC1...	[more]

BLAST of MC07g0508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14147.1	2.8e-83	90.48	protein binding	[more]
AT4G14147.2	3.5e-70	92.14	protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008384	Actin-related protein 2/3 complex subunit 4	PIRSF	PIRSF039100	ARPC4	coord: 1..169 e-value: 4.7E-87 score: 288.0
IPR008384	Actin-related protein 2/3 complex subunit 4	PFAM	PF05856	ARPC4	coord: 1..167 e-value: 6.7E-77 score: 256.8
IPR008384	Actin-related protein 2/3 complex subunit 4	PANTHER	PTHR22629	ARP2/3 COMPLEX 20 KD SUBUNIT	coord: 1..168
IPR034666	Arp2/3 complex subunit 2/4	GENE3D	3.30.1460.20		coord: 1..168 e-value: 3.5E-81 score: 272.7
IPR034666	Arp2/3 complex subunit 2/4	SUPERFAMILY	69645	Arp2/3 complex subunits	coord: 3..168
None	No IPR available	PANTHER	PTHR22629:SF0	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0508.1	MC07g0508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0030833	regulation of actin filament polymerization
biological_process	GO:0030041	actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0051015	actin filament binding