MC07g0442 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0442
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L3
Location	MC07: 12466440 .. 12468596 (+)
RNA-Seq Expression	MC07g0442
Synteny	MC07g0442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTACATTTTTAACGATGGAAGGAAAATAAATAAAATAAAATATTTTCCATAGAGAGGAAGCGGATAAGAAAACGAGCCACTCGTCTCATTCCCACAGTTCTTCTTCTTCTTCTTCTTCTTCACATGAATCTCTGAACTCAGAGCGGCAACAATGGCGGTCGTATCATTTTCATCACCTTCAACCTCAACAAGCCATCCCATCTTCAGCAACAATCCTTCTTCTTCTTCATCTCCGAGACTCAGAACTTCTTTCCTCGCACTTCCTCCTCCCAAATCCCACCGCAACAACTTCTCGCTTCGTCTGCAATTTCCTAGGCCAAGCACCGCTACACGCACCAACCATGGCCTGTCAATTTGTATGAGCATGGAGGCCGGCATTGGAGTAATGGCCACCAAGCTTGGAATGATGAGCTTCTTCGAGCCGGACGGCAAGGTCGTCCCTGTCACCGTCGTCGGTTTCAAGGAAGGCAACATTGTCACGCAGGTTAAGACGGAGGCCACGGACGGATACAGTGCCGTTCAGGTGGGATATCGTAGGGTTAGGGATCGGAAACTCACCAAACCCGAATTAGGGCACCTCCAGAAAGCGGGAGTGATTCCTATGCGCCATCTGCAGGAGTTTCGCCTGCAGTCTGTTGATGGATTCGAGCCCAATCAGCGCATGGATTTCAATGAACTCTTCAAGGAGGGTGATCTGGTTGATGTCTCCGGCATTACAATTGGAAAGGGATTTCAAGGTTTTGTTCCTTTCTTATTCTGTTTAAACTCTGTTAGCTCCAATATTGCCTTGGTTTTCGTTTTTCCTCTGAGTTTCAAGATTCTGTTCTCTGCTTGGAGTTGAATTTAGGCATGCTGAGAAATTTTCATAGATGTTTTTGCTGTTTGAATACATGATTGCATTCTGATTGTTTGGAGTTTGTTTGGGGTGAAAAAGAGAAGCCTCTCCATTTCATCCAGAGCCGAAGTTTGAAATTTCTAAATCCCCTCTCTTGTATTCAAAATTATTTAGGGTAAGTCATTAAATTTCTCAGTTCTTATGTCCCATGCTCTGAAACATAGTCTGATAAGAATTGAGACTTCTAAATCTTTTCAAAAGTTGTGTGTGGATGAGGATAAGACTTTTATCAGAACACATTATATTGCCATCTAGTGATGGACCTTGCCACAGTAGATTCCTTAATAATTGGGAGTCGGAGCTTTGCTCCTCTATACTCAGAGGCACTCACGCCCATTCCAAGCCCGACTCGAAAGACATCAAGGTTATTTTGGTATTAAGCTTACCAGAAGGTTTGAATTTGAGACCTCTAAGCCAGTATGACCAAGAGACTTCAAGTCTTTGCCGACTTGACTGTTACTTGTAGGGTCGGTAGATTCCGTAATATTTTGCTTATATCTTGATATTCATTTTAAATCTTTAAATAAGCCATTAGTTAATATTGTGCATACATCTTGATATTCATGTTAAATCTTCAAAGAAGCCATTAGATTAACGTAAGTTTTAACTACTTAGATTGATATACTCAGCAACACTCTCCTCTCATGTATAGGTTTTGATTCATATTACCCGAAAGATATTATGAAGATGTGAACTCAAATTACCCTCCAAAGTCCGACCTAAGTTGATCGACTACGATAAACTTTAACCATTTATCATATTTGCAACACACGAGCAAAACTCGATTATTAATTTGACTTATGAAACCCCCTTGTATTTATTTTTTAGGTGGAATCAAGAGGCATAACTTCAAAAGGGGTCCAATGAGCCACGGTTCGAAGAGCCACAGAGCACTCGGATCAATCGGTGCAGGAACTACACCCGGACGCGTGTACAAGGGGAAGAAGATGCCCGGAAGGATGGGAGGAACCAAGACAAAGATCAGAAAACTCAAGATTGTGAAGATTGATGATGACCTTAATGTTGTGATGATCAAAGGAGCTGTCCCTGGTAAGCCTGGAAACCTTCTTCGAATAGCCCCTGCAAAGATTGTAGGAAAGAACATTCCTAAGAATTAGCTTTTGCTCTCATCTGTCGGAATTGTGTTCTTCAATTCTTTTTGTATTTTTGAGTTGTTGCATCTCTTCAACTGGCTATTGTATTATGATAAGTTTACAGTTATATTCTCCAGAAAATGTTTGATTCATTTCCAGTTGCTC

mRNA sequence

GTTTTACATTTTTAACGATGGAAGGAAAATAAATAAAATAAAATATTTTCCATAGAGAGGAAGCGGATAAGAAAACGAGCCACTCGTCTCATTCCCACAGTTCTTCTTCTTCTTCTTCTTCTTCACATGAATCTCTGAACTCAGAGCGGCAACAATGGCGGTCGTATCATTTTCATCACCTTCAACCTCAACAAGCCATCCCATCTTCAGCAACAATCCTTCTTCTTCTTCATCTCCGAGACTCAGAACTTCTTTCCTCGCACTTCCTCCTCCCAAATCCCACCGCAACAACTTCTCGCTTCGTCTGCAATTTCCTAGGCCAAGCACCGCTACACGCACCAACCATGGCCTGTCAATTTGTATGAGCATGGAGGCCGGCATTGGAGTAATGGCCACCAAGCTTGGAATGATGAGCTTCTTCGAGCCGGACGGCAAGGTCGTCCCTGTCACCGTCGTCGGTTTCAAGGAAGGCAACATTGTCACGCAGGTTAAGACGGAGGCCACGGACGGATACAGTGCCGTTCAGGTGGGATATCGTAGGGTTAGGGATCGGAAACTCACCAAACCCGAATTAGGGCACCTCCAGAAAGCGGGAGTGATTCCTATGCGCCATCTGCAGGAGTTTCGCCTGCAGTCTGTTGATGGATTCGAGCCCAATCAGCGCATGGATTTCAATGAACTCTTCAAGGAGGGTGATCTGGTTGATGTCTCCGGCATTACAATTGGAAAGGGATTTCAAGGTGGAATCAAGAGGCATAACTTCAAAAGGGGTCCAATGAGCCACGGTTCGAAGAGCCACAGAGCACTCGGATCAATCGGTGCAGGAACTACACCCGGACGCGTGTACAAGGGGAAGAAGATGCCCGGAAGGATGGGAGGAACCAAGACAAAGATCAGAAAACTCAAGATTGTGAAGATTGATGATGACCTTAATGTTGTGATGATCAAAGGAGCTGTCCCTGGTAAGCCTGGAAACCTTCTTCGAATAGCCCCTGCAAAGATTGTAGGAAAGAACATTCCTAAGAATTAGCTTTTGCTCTCATCTGTCGGAATTGTGTTCTTCAATTCTTTTTGTATTTTTGAGTTGTTGCATCTCTTCAACTGGCTATTGTATTATGATAAGTTTACAGTTATATTCTCCAGAAAATGTTTGATTCATTTCCAGTTGCTC

Coding sequence (CDS)

ATGGCGGTCGTATCATTTTCATCACCTTCAACCTCAACAAGCCATCCCATCTTCAGCAACAATCCTTCTTCTTCTTCATCTCCGAGACTCAGAACTTCTTTCCTCGCACTTCCTCCTCCCAAATCCCACCGCAACAACTTCTCGCTTCGTCTGCAATTTCCTAGGCCAAGCACCGCTACACGCACCAACCATGGCCTGTCAATTTGTATGAGCATGGAGGCCGGCATTGGAGTAATGGCCACCAAGCTTGGAATGATGAGCTTCTTCGAGCCGGACGGCAAGGTCGTCCCTGTCACCGTCGTCGGTTTCAAGGAAGGCAACATTGTCACGCAGGTTAAGACGGAGGCCACGGACGGATACAGTGCCGTTCAGGTGGGATATCGTAGGGTTAGGGATCGGAAACTCACCAAACCCGAATTAGGGCACCTCCAGAAAGCGGGAGTGATTCCTATGCGCCATCTGCAGGAGTTTCGCCTGCAGTCTGTTGATGGATTCGAGCCCAATCAGCGCATGGATTTCAATGAACTCTTCAAGGAGGGTGATCTGGTTGATGTCTCCGGCATTACAATTGGAAAGGGATTTCAAGGTGGAATCAAGAGGCATAACTTCAAAAGGGGTCCAATGAGCCACGGTTCGAAGAGCCACAGAGCACTCGGATCAATCGGTGCAGGAACTACACCCGGACGCGTGTACAAGGGGAAGAAGATGCCCGGAAGGATGGGAGGAACCAAGACAAAGATCAGAAAACTCAAGATTGTGAAGATTGATGATGACCTTAATGTTGTGATGATCAAAGGAGCTGTCCCTGGTAAGCCTGGAAACCTTCTTCGAATAGCCCCTGCAAAGATTGTAGGAAAGAACATTCCTAAGAATTAG

Protein sequence

MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

Homology

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BLAST of MC07g0442 vs. ExPASy Swiss-Prot
Match: O80360 (50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPL3 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 7.6e-110
Identity = 204/262 (77.86%), Postives = 226/262 (86.26%), Query Frame = 0


Query: 30  LRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFF 89
           L+T+ L L  P  HR    LR       T+   +   SI  S+EAG+GVMATKLGMMSFF
Sbjct: 1   LKTTPLTLRSPFLHR--LPLRALKTHKPTSLHISKS-SISASLEAGVGVMATKLGMMSFF 60

Query: 90  EPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVI 149
           E  G VVPVTVVGF+EGNIVTQ+KTEATDGY+AVQVGYRRVRDRKLTKPE+GHL+K+G+I
Sbjct: 61  EESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGII 120

Query: 150 PMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMS 209
           P+RHLQEFRLQS+DGFE  Q++DF ELFKEGDLVDVSG TIGKGFQGGIKRHNFKRG M+
Sbjct: 121 PLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQMT 180

Query: 210 HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVP 269
           HGSKSHR LGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVKIDD LN++MIKGA+P
Sbjct: 181 HGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALP 240

Query: 270 GKPGNLLRIAPAKIVGKNIPKN 292
           GKPGNLLRIAPAKIVGKNIPK+
Sbjct: 241 GKPGNLLRIAPAKIVGKNIPKS 259

[Close]

BLAST of MC07g0442 vs. ExPASy Swiss-Prot
Match: P82191 (50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL3 PE=1 SV=2)

HSP 1 Score: 386.7 bits (992), Expect = 2.3e-106
Identity = 212/291 (72.85%), Postives = 233/291 (80.07%), Query Frame = 0


Query: 5   SFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT---R 64
           S SSP   +     +  P   S  RL TSF+  P       N  ++L+   PS +T   R
Sbjct: 23  SLSSPKAVSLSSSVNGTPKVQSL-RLSTSFVCSP-------NQIIKLKSVSPSRSTQLRR 82

Query: 65  TNHGLSI-CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGY 124
              GL I  MS++AGIGVM TKLGMMSFFE DG VVPVTV+GFKEGNIVTQVKTE+TDGY
Sbjct: 83  AVGGLEIKMMSVDAGIGVMGTKLGMMSFFEEDGTVVPVTVIGFKEGNIVTQVKTESTDGY 142

Query: 125 SAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEG 184
           +AVQVGY R+RDRKLT PE GHL KAGVIPMRHLQEFRL SVD F P+Q++ F ELFKEG
Sbjct: 143 NAVQVGYERLRDRKLTMPERGHLNKAGVIPMRHLQEFRLVSVDDFTPSQKLLFEELFKEG 202

Query: 185 DLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRM 244
           D+VD+SG TIGKGFQGGIKRHNFKRG M+HGSKSHRALGSIGAGTTPG VYKGKKMPGRM
Sbjct: 203 DMVDISGTTIGKGFQGGIKRHNFKRGLMTHGSKSHRALGSIGAGTTPGHVYKGKKMPGRM 262

Query: 245 GGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292
           GGTKTKIRKLKI+KID DL VVMIKGAVPGKPGNLLR+APAKIVGKNIPKN
Sbjct: 263 GGTKTKIRKLKIMKIDTDLRVVMIKGAVPGKPGNLLRLAPAKIVGKNIPKN 305

[Close]

BLAST of MC07g0442 vs. ExPASy Swiss-Prot
Match: Q9SKX4 (50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3A PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 5.1e-106
Identity = 188/224 (83.93%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 68  ICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGY 127
           +  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY AVQ+GY
Sbjct: 48  VSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGY 107

Query: 128 RRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSG 187
           RRVRD+KLTKPE GHLQKAG IPMRHLQEFRL +++GFEPNQ++ F+E+FKEGDLVDV+G
Sbjct: 108 RRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAG 167

Query: 188 ITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKI 247
            TIGKGFQGGIKRH+FKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT+TKI
Sbjct: 168 TTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKI 227

Query: 248 RKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292
           RKLKIVK+D +LNVVMIKGA+PGKPGNLLRI PAKIVG NIPKN
Sbjct: 228 RKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271

[Close]

BLAST of MC07g0442 vs. ExPASy Swiss-Prot
Match: B0C1D3 (50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=rplC PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.3e-63
Identity = 121/213 (56.81%), Postives = 159/213 (74.65%), Query Frame = 0


Query: 76  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSAVQVGYRRVRDRK 135
           +G++ TKLGM   F+  G+ +PVTVV  + G   VTQ+KT  TDGY+A+Q+GY    ++ 
Sbjct: 3   VGILGTKLGMTQVFDEAGRAIPVTVV--QAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 62

Query: 136 LTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGF 195
           LT+PELGHL+K+G  P+RHLQE+RL  V  +E  Q +   +LF EG LVD+SG +IG+GF
Sbjct: 63  LTRPELGHLKKSGSTPVRHLQEYRLADVSEYELGQSIS-ADLFSEGQLVDISGTSIGRGF 122

Query: 196 QGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVK 255
            G  KRHNF+RGPM HGSK+HRA GS GAGTTPGR+Y GK+M G+MG  K  IRKL +V+
Sbjct: 123 AGYQKRHNFRRGPMGHGSKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVVR 182

Query: 256 IDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKN 288
           +D + NV++IKG+VPGKPG LL I PA IVG++
Sbjct: 183 VDAERNVLLIKGSVPGKPGALLNIQPATIVGES 212

[Close]

BLAST of MC07g0442 vs. ExPASy Swiss-Prot
Match: B1XJT9 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rplC PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 6.9e-63
Identity = 122/213 (57.28%), Postives = 163/213 (76.53%), Query Frame = 0


Query: 76  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSAVQVGYRRVRDR 135
           +G++ TKLGM   F+ + G  +PVTVV  + G   VTQ+KT  TDGY++VQ+GY  V+++
Sbjct: 3   LGILGTKLGMTQIFDNETGTAIPVTVV--QAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 62

Query: 136 KLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKG 195
            LTKP+LGHL+KA   P+RHL+E+RL  V G+E  Q +  N +F+ G +VDVSG TIG+G
Sbjct: 63  NLTKPQLGHLKKADAAPLRHLKEYRLDDVSGYELGQAITAN-IFEAGQVVDVSGNTIGRG 122

Query: 196 FQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 255
           F G  KRHNFKRG M+HGSK+HR  GS GAGTTPGRVY GK+M GR GGTK  +RKL++V
Sbjct: 123 FAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEVV 182

Query: 256 KIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGK 287
           ++D++ N+++IKGA+PGK GNLL IAP+ IVG+
Sbjct: 183 RVDEEKNLLLIKGAIPGKAGNLLSIAPSNIVGQ 212

[Close]

BLAST of MC07g0442 vs. NCBI nr
Match: XP_022155788.1 (50S ribosomal protein L3, chloroplastic [Momordica charantia])

HSP 1 Score: 569 bits (1466), Expect = 2.40e-204
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT 60
           MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT
Sbjct: 1   MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT 60

Query: 61  RTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGY 120
           RTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGY
Sbjct: 61  RTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGY 120

Query: 121 SAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEG 180
           SAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEG
Sbjct: 121 SAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEG 180

Query: 181 DLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRM 240
           DLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRM
Sbjct: 181 DLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRM 240

Query: 241 GGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           GGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 GGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291

[Close]

BLAST of MC07g0442 vs. NCBI nr
Match: KAG6574805.1 (50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013387.1 50S ribosomal protein L3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 497 bits (1279), Expect = 7.85e-176
Identity = 260/294 (88.44%), Postives = 272/294 (92.52%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSS---SPRLRTSFLALPPPKSHRNNFSLRLQFPRPS 60
           M+V+S SS STS  HPIF+NN SSSS   S +LRTSFLALP  KSHRNN +LR QFPRP 
Sbjct: 1   MSVISISSASTSNRHPIFTNNASSSSPSSSLKLRTSFLALPL-KSHRNN-NLRFQFPRPR 60

Query: 61  TATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEAT 120
           T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEAT
Sbjct: 61  TTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEAT 120

Query: 121 DGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELF 180
           DGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELF
Sbjct: 121 DGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELF 180

Query: 181 KEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240
           KEGDLVDVSG TIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMP
Sbjct: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMP 240

Query: 241 GRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           GRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 GRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of MC07g0442 vs. NCBI nr
Match: XP_023006396.1 (50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 495 bits (1275), Expect = 3.19e-175
Identity = 259/294 (88.10%), Postives = 272/294 (92.52%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSS---SPRLRTSFLALPPPKSHRNNFSLRLQFPRPS 60
           M+V+S SS STS  HPIF+NN SSSS   S +LRTSFLALP  KSHRNN ++R QFPRP 
Sbjct: 1   MSVISISSASTSKRHPIFTNNASSSSPSSSLKLRTSFLALPL-KSHRNN-NVRFQFPRPR 60

Query: 61  TATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEAT 120
           T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEAT
Sbjct: 61  TTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEAT 120

Query: 121 DGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELF 180
           DGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELF
Sbjct: 121 DGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELF 180

Query: 181 KEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240
           KEGDLVDVSG TIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMP
Sbjct: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMP 240

Query: 241 GRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           GRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 GRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of MC07g0442 vs. NCBI nr
Match: XP_022959488.1 (50S ribosomal protein L3, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 494 bits (1273), Expect = 6.44e-175
Identity = 259/294 (88.10%), Postives = 271/294 (92.18%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSS---SPRLRTSFLALPPPKSHRNNFSLRLQFPRPS 60
           M+V+S S  STS  HPIF+NN SSSS   S +LRTSFLALP  KSHRNN +LR QFPRP 
Sbjct: 1   MSVISISLASTSNRHPIFTNNASSSSPSSSLKLRTSFLALPL-KSHRNN-NLRFQFPRPR 60

Query: 61  TATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEAT 120
           T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEAT
Sbjct: 61  TTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEAT 120

Query: 121 DGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELF 180
           DGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELF
Sbjct: 121 DGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELF 180

Query: 181 KEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240
           KEGDLVDVSG TIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMP
Sbjct: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMP 240

Query: 241 GRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           GRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 GRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of MC07g0442 vs. NCBI nr
Match: XP_023547387.1 (50S ribosomal protein L3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493 bits (1268), Expect = 3.72e-174
Identity = 258/294 (87.76%), Postives = 271/294 (92.18%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSS---SPRLRTSFLALPPPKSHRNNFSLRLQFPRPS 60
           M+V+S SS STS  HPIF+NN SSSS   S +LRTSFLALP  KSHRNN ++R QFPRP 
Sbjct: 1   MSVISISSASTSNRHPIFTNNASSSSPSSSLKLRTSFLALPL-KSHRNN-NVRFQFPRPR 60

Query: 61  TATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEAT 120
           T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEAT
Sbjct: 61  TTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEAT 120

Query: 121 DGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELF 180
           DGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+D FEPNQR+ FNELF
Sbjct: 121 DGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDEFEPNQRLVFNELF 180

Query: 181 KEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240
           KEGDLVDVSG TIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMP
Sbjct: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMP 240

Query: 241 GRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           GRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 GRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of MC07g0442 vs. ExPASy TrEMBL
Match: A0A6J1DNV5 (50S ribosomal protein L3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022824 PE=3 SV=1)

HSP 1 Score: 569 bits (1466), Expect = 1.16e-204
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT 60
           MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT
Sbjct: 1   MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT 60

Query: 61  RTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGY 120
           RTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGY
Sbjct: 61  RTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGY 120

Query: 121 SAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEG 180
           SAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEG
Sbjct: 121 SAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEG 180

Query: 181 DLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRM 240
           DLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRM
Sbjct: 181 DLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRM 240

Query: 241 GGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           GGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 GGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291

[Close]

BLAST of MC07g0442 vs. ExPASy TrEMBL
Match: A0A6J1KXN5 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499138 PE=3 SV=1)

HSP 1 Score: 495 bits (1275), Expect = 1.55e-175
Identity = 259/294 (88.10%), Postives = 272/294 (92.52%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSS---SPRLRTSFLALPPPKSHRNNFSLRLQFPRPS 60
           M+V+S SS STS  HPIF+NN SSSS   S +LRTSFLALP  KSHRNN ++R QFPRP 
Sbjct: 1   MSVISISSASTSKRHPIFTNNASSSSPSSSLKLRTSFLALPL-KSHRNN-NVRFQFPRPR 60

Query: 61  TATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEAT 120
           T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEAT
Sbjct: 61  TTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEAT 120

Query: 121 DGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELF 180
           DGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELF
Sbjct: 121 DGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELF 180

Query: 181 KEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240
           KEGDLVDVSG TIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMP
Sbjct: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMP 240

Query: 241 GRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           GRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 GRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of MC07g0442 vs. ExPASy TrEMBL
Match: A0A6J1H630 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460446 PE=3 SV=1)

HSP 1 Score: 494 bits (1273), Expect = 3.12e-175
Identity = 259/294 (88.10%), Postives = 271/294 (92.18%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSS---SPRLRTSFLALPPPKSHRNNFSLRLQFPRPS 60
           M+V+S S  STS  HPIF+NN SSSS   S +LRTSFLALP  KSHRNN +LR QFPRP 
Sbjct: 1   MSVISISLASTSNRHPIFTNNASSSSPSSSLKLRTSFLALPL-KSHRNN-NLRFQFPRPR 60

Query: 61  TATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEAT 120
           T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEAT
Sbjct: 61  TTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEAT 120

Query: 121 DGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELF 180
           DGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELF
Sbjct: 121 DGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNELF 180

Query: 181 KEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMP 240
           KEGDLVDVSG TIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMP
Sbjct: 181 KEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMP 240

Query: 241 GRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           GRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 GRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of MC07g0442 vs. ExPASy TrEMBL
Match: A0A1S3CBR5 (50S ribosomal protein L3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499009 PE=3 SV=1)

HSP 1 Score: 490 bits (1261), Expect = 2.18e-173
Identity = 256/295 (86.78%), Postives = 267/295 (90.51%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSSSPR----LRTSFLALPPPKSHRNNFSLRLQFPRP 60
           M+++SFSS S ST HPIF+NNPSSSSS      LRTSFLALP    H+NN  LR  FP  
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSLTLRTSFLALPLKSHHKNN--LRFHFPTR 60

Query: 61  STATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
            T  R + GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA
Sbjct: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPELGHL+KAG IPMRHLQEFRL+SVDGFEPNQR+ FNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSG TIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           PGRMGGTK KIRKLKIVKID+DLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of MC07g0442 vs. ExPASy TrEMBL
Match: A0A6J1KIF2 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494241 PE=3 SV=1)

HSP 1 Score: 488 bits (1256), Expect = 1.13e-172
Identity = 256/292 (87.67%), Postives = 270/292 (92.47%), Query Frame = 0


Query: 1   MAVVSFSSPSTSTSHPIFSNNPSSSSSP-RLRTSFLALPPPKSHRNNFSLRLQFPRPSTA 60
           M+ + FSS STS  HPIF+NN SSSSS  RLRTSFLALP  KSH N+ +LRLQFP   T 
Sbjct: 1   MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPL-KSHHNS-NLRLQFPAQRTT 60

Query: 61  TRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDG 120
            RTN+G+ +CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDG
Sbjct: 61  RRTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDG 120

Query: 121 YSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKE 180
           YSAVQVGYRRVRDRKLTKPELGHL+KAG IPMRHLQEFRL +VDGFEPNQR+ FNELFKE
Sbjct: 121 YSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKE 180

Query: 181 GDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240
           GDLVDVSGITIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGR
Sbjct: 181 GDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGR 240

Query: 241 MGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 291
           MGGTK KIRKLKIVK+DD+LNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 MGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 290

[Close]

BLAST of MC07g0442 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 385.6 bits (989), Expect = 3.6e-107
Identity = 188/224 (83.93%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 68  ICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGY 127
           +  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY AVQ+GY
Sbjct: 48  VSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGY 107

Query: 128 RRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSG 187
           RRVRD+KLTKPE GHLQKAG IPMRHLQEFRL +++GFEPNQ++ F+E+FKEGDLVDV+G
Sbjct: 108 RRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAG 167

Query: 188 ITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKI 247
            TIGKGFQGGIKRH+FKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT+TKI
Sbjct: 168 TTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKI 227

Query: 248 RKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292
           RKLKIVK+D +LNVVMIKGA+PGKPGNLLRI PAKIVG NIPKN
Sbjct: 228 RKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271

[Close]

BLAST of MC07g0442 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-33
Identity = 83/206 (40.29%), Postives = 124/206 (60.19%), Query Frame = 0


Query: 77  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLT 136
           G++A K GM + ++  GK +P++++ + + NIV+QVKT   +G  A+Q+G  + + + L+
Sbjct: 78  GIIAVKCGMTALWDKWGKRIPISIL-WVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHLS 137

Query: 137 KPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQG 196
           K  +GH +  GV   R L+EF + + D   P         F  G  VDV+GIT GKGFQG
Sbjct: 138 KAVVGHFRAQGVPLKRKLREFPV-TEDALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQG 197

Query: 197 GIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 256
            +KRH F   P SHG S SHR+ GS G    PG+V+KG+KM GRMG  +  ++ + + KI
Sbjct: 198 CMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYKI 257

Query: 257 DDDLNVVMIKGAVPGKPGNLLRIAPA 282
           D   N++ ++G VPG  GN + I  A
Sbjct: 258 DPARNLMWVRGQVPGAEGNFVFIKDA 281

The following BLAST results are available for this feature:

BLAST of MC07g0442 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80360	7.6e-110	77.86	50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 ...	[more]
P82191	2.3e-106	72.85	50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL3 PE=...	[more]
Q9SKX4	5.1e-106	83.93	50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
B0C1D3	5.3e-63	56.81	50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 G...	[more]
B1XJT9	6.9e-63	57.28	50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR...	[more]

BLAST of MC07g0442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155788.1	2.40e-204	100.00	50S ribosomal protein L3, chloroplastic [Momordica charantia]	[more]
KAG6574805.1	7.85e-176	88.44	50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023006396.1	3.19e-175	88.10	50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima]	[more]
XP_022959488.1	6.44e-175	88.10	50S ribosomal protein L3, chloroplastic-like [Cucurbita moschata]	[more]
XP_023547387.1	3.72e-174	87.76	50S ribosomal protein L3, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC07g0442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNV5	1.16e-204	100.00	50S ribosomal protein L3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KXN5	1.55e-175	88.10	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1H630	3.12e-175	88.10	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A1S3CBR5	2.18e-173	86.78	50S ribosomal protein L3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499009 ...	[more]
A0A6J1KIF2	1.13e-172	87.67	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of MC07g0442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43030.1	3.6e-107	83.93	Ribosomal protein L3 family protein	[more]
AT3G17465.1	2.0e-33	40.29	ribosomal protein L3 plastid	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 170..257 e-value: 6.6E-17 score: 61.5
None	No IPR available	GENE3D	3.30.160.810		coord: 108..167 e-value: 9.4E-21 score: 76.0
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 203..283 e-value: 1.3E-20 score: 75.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR11229:SF16	50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC	coord: 70..290
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAM	TIGR03625	TIGR03625	coord: 77..278 e-value: 1.2E-74 score: 248.5
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 70..290
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 75..282 score: 36.020687
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 177..200
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 76..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0442.1	MC07g0442.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome