MC07g0432 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0432
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	40S ribosomal protein S13
Location	MC07: 12328459 .. 12331097 (+)
RNA-Seq Expression	MC07g0432
Synteny	MC07g0432

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCGGCCCAGTGCCCGTGCCCGAGCCCGAAGAGCACTGCAATTTCCCAAACCACAATCAAAAACCCTAAAGCCGCCATTGTTTTGCAGTGTTGCAGCAGAGGAGCTAGCAAAGGTGTAGTTCAGCTTCAGAGGATCGGAGGCCGTCTTCTTCTCCACGCGCCGTCGCCATGGGTCGTATGCACAGTCGAGGGTTCGTCTATTCTTTCACTGAAGAAACCTCGCGTTTAAGATTCATCGAAAAACCTGTTTAGAAATTGCGAATCATTTTTTTTTTTACTCTGCTTATTTGCATTTGCAGTAAGGGTATTTCAGCTTCGGCACTGCCGTACAAGAGGACGCCGCCGAGTTGGCTGAAGATCTCCTCTCAGGATGTAGGAATCCCTCAAACTTTTGTAGATATTTGTTTAGAAATCTATGGAGTGGATAATGTATGTGTTGGGATAGTGGATTCATATGAATATCATGGAGTTTTTATAGAGCCACTGAATAATGAGGGAATACTGTAGGCTTGCTGATTAAACGTGGATGCGAGAACATTTGAGATAATTTAAGCAGTTTGCAGTTCAATATTTTTATGATGATTTCATCTTGTGGCCATGCATTTTTTGAACATCAGAATTCCTTAGATTCTTTTATCTGTGGTTAGAAAGTTAGTTCTTCTTGGGAAAGATTGCGTTTTAAGTTTTAACAGATTGAAAATGAAAATCGTCGCAGTTGATTTTAATGGAATACGGTGATATGTTTATTAGTGTCATCTGAGTGCTTGGTCTGATGATTGTTCTTGTGAATATCTAAGATAACCGAACAAGTTCTTCCATTGTCGATGTCGATTTAACTGTTTGTTAGTCTAAAGGAAGGGAGTCGAGTCTCTGTAATATATGTAGAAATTGATGGCTTTCCTTTGACCATTCAGGTTGCCGAGAACATTTGCAAATTTGCCAAGAAGGGTTTGACACCATCTCAAATTGGTGTTATTCTTCGTGATTCTCACGGGATTGCTCAGGTGAAAAGTGTAACTGGGAGCAAGATTTTGCGAATATTGAAGGCTCATGGTGAGCCCTTTCTACTCCCTTCCAACAAATTTCTTCTGCTTCATACATAGTTCAAGATGACTATGTGATCTTTTTACCATGTTTTGTTTGTTGGCTCAGGGCTAGCTCCTGAAATTCCGGAGGATCTTTACCATCTCATCAAGAAAGCTGTTTCAATCAGAAAGCATTTGGAGAGGAACAGGAAGGACAAAGATTCCAAGTTCAGGTTGATTCTGGTGGAGAGCAGGATCCATCGCCTGGCCCGGTATTACAAGAAGACAAAGAAGCTTCCCCCTGTTTGGAAGTAGTAAGTACTTTTGAGGCTCATAAGAATATGAATTATAGTATCTGAACTTTTACATGAAAATATTGCATAGGGTAGATTAAATTCAGTTTTTCAACTGCTTTCTGATCTTTAGCCTTTAAATTCAGTTTAATCCTGGAAAGAATATAAAGGATGATAACAAGCAAATCTTTGTTCTGCTACATAATTGGTACTAAAAGTAGCAACTAGATTTAATTTACAATGCATCAACTAAAATGTTGCTTTGCCATGCTTTAATATTGTTAGTGTGAACTGCTAACATGTGTGTAACTCAGTGGTAATTGACATCTGTCTCTGACCAATAAGTCATGAGTTTGAATCCCTCATTTTTGTGCTTAGGAAAAAATATAGTTAGTGTGAACTTTTGTTGCATGGTGGATTCCGAGACTCGTCTTTATAGAGTTGCATTAGACTTGTTGAGAATCCATATAAATGAATTAAATTTACCCAACCCATCCATATAAATGAATTCTCATTTTTCTCAATTAAAAGTTTGGTTTGTTATAAAAAAAATTTATTATTCATCCTTAACAAGACTTGAGAATTTATATACATGTATATAGCATGGGCATTGGAGATCACACTCCTTGCAATTATGCTCATGGAAAGCCCCACATTTAGTCTGGGTTTTGAATCATCTGTTACTTAGAGTATATCCCCAAACATCCAAGTCCTTAACTTACAGCGCATCTCCAAACTTGTCGATCCCTTACCTTAGATCGTATCTCCAAACTTGTCAATCCCTTACCTTAGAGTGTCGCCGATCCTTACAACTACAAATTTCTTAAGTCCTTACCTTCGAGTGTATCTCCAAACATCCCTGATCCTTACAACTAGGAGACTTTCGAGGATTTTAGACTTATAAAATTTGATTTTGGCATGCTTTTATATTTGATTGCGAAATTGCACCAAGTTTTTTGTATTCTTTCCAATGCTGAATTCTCAAATTGATGGAGAGAACCATTCTTTTTTTTACAGTGAATCCACCACGGCCAGCACCCTCGTGGCTTAGGAGAAGCAAGTTTTTGGTGATTACTGAGAGAAGCATGGAGTTATTTTGGCGATTAAACTTTCCATCAGTACTCATCAGCAGTTAGTTAATATGTCTTGTGCTTATACTTAAGAGGTCATTCGAGTTTTGTAACTCTTAATGCAAATTTAATTTCTGCTATGCTTTTGATTGGTAGGGTTCTTTTTCTTTTCTTTTTATTTAAAAATAATATTGAACTGACATCTTGATTTAGGGAAAATGAAAGATCGACCTTGAAATGTATTGAATTT

mRNA sequence

GGCCGGCCCAGTGCCCGTGCCCGAGCCCGAAGAGCACTGCAATTTCCCAAACCACAATCAAAAACCCTAAAGCCGCCATTGTTTTGCAGTGTTGCAGCAGAGGAGCTAGCAAAGGTGTAGTTCAGCTTCAGAGGATCGGAGGCCGTCTTCTTCTCCACGCGCCGTCGCCATGGGTCGTATGCACAGTCGAGGTAAGGGTATTTCAGCTTCGGCACTGCCGTACAAGAGGACGCCGCCGAGTTGGCTGAAGATCTCCTCTCAGGATGTTGCCGAGAACATTTGCAAATTTGCCAAGAAGGGTTTGACACCATCTCAAATTGGTGTTATTCTTCGTGATTCTCACGGGATTGCTCAGGTGAAAAGTGTAACTGGGAGCAAGATTTTGCGAATATTGAAGGCTCATGGGCTAGCTCCTGAAATTCCGGAGGATCTTTACCATCTCATCAAGAAAGCTGTTTCAATCAGAAAGCATTTGGAGAGGAACAGGAAGGACAAAGATTCCAAGTTCAGGTTGATTCTGGTGGAGAGCAGGATCCATCGCCTGGCCCGGTATTACAAGAAGACAAAGAAGCTTCCCCCTGTTTGGAAGTATGAATCCACCACGGCCAGCACCCTCGTGGCTTAGGAGAAGCAAGTTTTTGGTGATTACTGAGAGAAGCATGGAGTTATTTTGGCGATTAAACTTTCCATCAGTACTCATCAGCAGTTAGTTAATATGTCTTGTGCTTATACTTAAGAGGTCATTCGAGTTTTGTAACTCTTAATGCAAATTTAATTTCTGCTATGCTTTTGATTGGTAGGGTTCTTTTTCTTTTCTTTTTATTTAAAAATAATATTGAACTGACATCTTGATTTAGGGAAAATGAAAGATCGACCTTGAAATGTATTGAATTT

Coding sequence (CDS)

ATGGGTCGTATGCACAGTCGAGGTAAGGGTATTTCAGCTTCGGCACTGCCGTACAAGAGGACGCCGCCGAGTTGGCTGAAGATCTCCTCTCAGGATGTTGCCGAGAACATTTGCAAATTTGCCAAGAAGGGTTTGACACCATCTCAAATTGGTGTTATTCTTCGTGATTCTCACGGGATTGCTCAGGTGAAAAGTGTAACTGGGAGCAAGATTTTGCGAATATTGAAGGCTCATGGGCTAGCTCCTGAAATTCCGGAGGATCTTTACCATCTCATCAAGAAAGCTGTTTCAATCAGAAAGCATTTGGAGAGGAACAGGAAGGACAAAGATTCCAAGTTCAGGTTGATTCTGGTGGAGAGCAGGATCCATCGCCTGGCCCGGTATTACAAGAAGACAAAGAAGCTTCCCCCTGTTTGGAAGTATGAATCCACCACGGCCAGCACCCTCGTGGCTTAG

Protein sequence

MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA

Homology

[Close]

BLAST of MC07g0432 vs. ExPASy Swiss-Prot
Match: P62302 (40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.1e-79
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLKISSQDV ENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 152
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy Swiss-Prot
Match: P59224 (40S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 6.3e-76
Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKR+ PSWLK +SQDV E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 152
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy Swiss-Prot
Match: P46298 (40S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-75
Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGR+HS+GKGIS+SALPY+RT PSWLKISSQDV E ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRLHSKGKGISSSALPYRRTAPSWLKISSQDVDETICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER RKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 152
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy Swiss-Prot
Match: P59223 (40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-75
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKR+ PSWLK + QDV E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 152
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy Swiss-Prot
Match: Q69UI1 (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0117300 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.4e-69
Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLK ++ DV E I K AKKG  PSQIGV+LRD HGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKTAASDVEEMIMKAAKKGQMPSQIGVVLRDQHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
             VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 152
           RIHRLARYYK+TKKLPP WKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPTWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. NCBI nr
Match: XP_022143980.1 (40S ribosomal protein S13-like [Momordica charantia] >XP_022959507.1 40S ribosomal protein S13-like [Cucurbita moschata] >XP_022964010.1 40S ribosomal protein S13-like [Cucurbita moschata] >XP_023000449.1 40S ribosomal protein S13-like [Cucurbita maxima] >XP_023006177.1 40S ribosomal protein S13-like [Cucurbita maxima] >XP_023514341.1 40S ribosomal protein S13-like [Cucurbita pepo subsp. pepo] >XP_023547500.1 40S ribosomal protein S13-like [Cucurbita pepo subsp. pepo] >KAG6574796.1 40S ribosomal protein S13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013377.1 40S ribosomal protein S13 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6593712.1 40S ribosomal protein S13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026051.1 40S ribosomal protein S13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297 bits (761), Expect = 1.63e-101
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. NCBI nr
Match: XP_004153746.1 (40S ribosomal protein S13 [Cucumis sativus] >XP_008460113.1 PREDICTED: 40S ribosomal protein S13 [Cucumis melo] >KGN46246.1 hypothetical protein Csa_005737 [Cucumis sativus])

HSP 1 Score: 296 bits (758), Expect = 4.66e-101
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. NCBI nr
Match: XP_038906798.1 (40S ribosomal protein S13 [Benincasa hispida])

HSP 1 Score: 296 bits (758), Expect = 4.66e-101
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKIS+QDVAENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. NCBI nr
Match: XP_010053902.1 (40S ribosomal protein S13 [Eucalyptus grandis] >XP_010066926.1 40S ribosomal protein S13 [Eucalyptus grandis] >XP_030468523.1 40S ribosomal protein S13 [Syzygium oleosum] >XP_030468524.1 40S ribosomal protein S13 [Syzygium oleosum] >XP_030529924.1 40S ribosomal protein S13 [Rhodamnia argentea] >XP_030529925.1 40S ribosomal protein S13 [Rhodamnia argentea] >XP_030544418.1 40S ribosomal protein S13 [Rhodamnia argentea] >XP_031376603.1 40S ribosomal protein S13 [Punica granatum] >XP_031381691.1 40S ribosomal protein S13 [Punica granatum] >KAF3439993.1 hypothetical protein FNV43_RR18271 [Rhamnella rubrinervis] >KAF8020424.1 hypothetical protein BT93_G0976 [Corymbia citriodora subsp. variegata] >PON34614.1 Ribosomal protein [Parasponia andersonii] >KAF3440239.1 hypothetical protein FNV43_RR18522 [Rhamnella rubrinervis] >KAF8020425.1 hypothetical protein BT93_G0977 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 295 bits (756), Expect = 9.42e-101
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDV ENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. NCBI nr
Match: XP_010101741.2 (40S ribosomal protein S13 [Morus notabilis] >XP_022152725.1 40S ribosomal protein S13 [Momordica charantia])

HSP 1 Score: 295 bits (755), Expect = 1.34e-100
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDV ENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy TrEMBL
Match: A0A6J1KV63 (40S ribosomal protein S13-like OS=Cucurbita maxima OX=3661 GN=LOC111498990 PE=3 SV=1)

HSP 1 Score: 297 bits (761), Expect = 7.87e-102
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy TrEMBL
Match: A0A6J1HJL3 (40S ribosomal protein S13-like OS=Cucurbita moschata OX=3662 GN=LOC111464161 PE=3 SV=1)

HSP 1 Score: 297 bits (761), Expect = 7.87e-102
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy TrEMBL
Match: A0A6J1CQC4 (40S ribosomal protein S13-like OS=Momordica charantia OX=3673 GN=LOC111013762 PE=3 SV=1)

HSP 1 Score: 297 bits (761), Expect = 7.87e-102
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy TrEMBL
Match: A0A0A0KEP4 (Ribosomal_S13_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G077430 PE=3 SV=1)

HSP 1 Score: 296 bits (758), Expect = 2.26e-101
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. ExPASy TrEMBL
Match: A0A1S3CBW3 (40S ribosomal protein S13 OS=Cucumis melo OX=3656 GN=LOC103499020 PE=3 SV=1)

HSP 1 Score: 296 bits (758), Expect = 2.26e-101
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. TAIR 10
Match: AT4G00100.1 (ribosomal protein S13A )

HSP 1 Score: 284.6 bits (727), Expect = 4.5e-77
Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKR+ PSWLK +SQDV E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 152
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

[Close]

BLAST of MC07g0432 vs. TAIR 10
Match: AT3G60770.1 (Ribosomal protein S13/S15 )

HSP 1 Score: 282.7 bits (722), Expect = 1.7e-76
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGISASALPYKR+ PSWLK + QDV E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 152
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151

The following BLAST results are available for this feature:

BLAST of MC07g0432 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62302	6.1e-79	98.01	40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1	[more]
P59224	6.3e-76	94.70	40S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1	[more]
P46298	1.1e-75	94.70	40S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1	[more]
P59223	2.4e-75	94.04	40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1	[more]
Q69UI1	4.4e-69	87.42	40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g011...	[more]

BLAST of MC07g0432 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143980.1	1.63e-101	100.00	40S ribosomal protein S13-like [Momordica charantia] >XP_022959507.1 40S ribosom...	[more]
XP_004153746.1	4.66e-101	99.34	40S ribosomal protein S13 [Cucumis sativus] >XP_008460113.1 PREDICTED: 40S ribos...	[more]
XP_038906798.1	4.66e-101	99.34	40S ribosomal protein S13 [Benincasa hispida]	[more]
XP_010053902.1	9.42e-101	99.34	40S ribosomal protein S13 [Eucalyptus grandis] >XP_010066926.1 40S ribosomal pro...	[more]
XP_010101741.2	1.34e-100	99.34	40S ribosomal protein S13 [Morus notabilis] >XP_022152725.1 40S ribosomal protei...	[more]

BLAST of MC07g0432 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KV63	7.87e-102	100.00	40S ribosomal protein S13-like OS=Cucurbita maxima OX=3661 GN=LOC111498990 PE=3 ...	[more]
A0A6J1HJL3	7.87e-102	100.00	40S ribosomal protein S13-like OS=Cucurbita moschata OX=3662 GN=LOC111464161 PE=...	[more]
A0A6J1CQC4	7.87e-102	100.00	40S ribosomal protein S13-like OS=Momordica charantia OX=3673 GN=LOC111013762 PE...	[more]
A0A0A0KEP4	2.26e-101	99.34	Ribosomal_S13_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G07...	[more]
A0A1S3CBW3	2.26e-101	99.34	40S ribosomal protein S13 OS=Cucumis melo OX=3656 GN=LOC103499020 PE=3 SV=1	[more]

BLAST of MC07g0432 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00100.1	4.5e-77	94.70	ribosomal protein S13A	[more]
AT3G60770.1	1.7e-76	94.04	Ribosomal protein S13/S15	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000589	Ribosomal protein S15	SMART	SM01387	Ribosomal_S15_2	coord: 70..149 e-value: 2.9E-15 score: 66.7
IPR000589	Ribosomal protein S15	PFAM	PF00312	Ribosomal_S15	coord: 74..145 e-value: 4.7E-15 score: 55.5
IPR000589	Ribosomal protein S15	PROSITE	PS00362	RIBOSOMAL_S15	coord: 98..128
IPR000589	Ribosomal protein S15	CDD	cd00353	Ribosomal_S15p_S13e	coord: 70..143 e-value: 7.48228E-27 score: 94.107
IPR012606	Ribosomal protein S13/S15, N-terminal	SMART	SM01386	Ribosomal_S13_N_2	coord: 1..60 e-value: 8.2E-39 score: 144.9
IPR012606	Ribosomal protein S13/S15, N-terminal	PFAM	PF08069	Ribosomal_S13_N	coord: 1..60 e-value: 5.6E-31 score: 106.4
None	No IPR available	GENE3D	1.10.287.10		coord: 83..151 e-value: 8.8E-41 score: 140.1
None	No IPR available	GENE3D	4.10.860.130		coord: 35..82 e-value: 3.0E-29 score: 102.5
None	No IPR available	PANTHER	PTHR11885:SF22	40S RIBOSOMAL PROTEIN S13	coord: 1..151
IPR023029	Ribosomal protein S15P	PANTHER	PTHR11885	RIBOSOMAL PROTEIN S15P/S13E	coord: 1..151
IPR023029	Ribosomal protein S15P	HAMAP	MF_01343_A	Ribosomal_S15_A	coord: 3..149 score: 31.790936
IPR009068	S15/NS1, RNA-binding	SUPERFAMILY	47060	S15/NS1 RNA-binding domain	coord: 66..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0432.1	MC07g0432.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome