MC07g0358 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0358
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
LocationMC07: 11447420 .. 11447614 (+)
RNA-Seq ExpressionMC07g0358
SyntenyMC07g0358
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCACATGGGACATCTCACCGATGGGATTCCATATGCTCAGATCGGAGTATATTTCTGTAGTAGCAACTATTTGGTTGTATGTGGTAAAGAATCAGATCATGCCAACAGAGAATGATCAGCACATCATTTGTGATTGGGTGCTATTAATTTATACCATGATTAAGGGTTCTCAATTACTTTTGGGAGACTTATTG

mRNA sequence

TCCACATGGGACATCTCACCGATGGGATTCCATATGCTCAGATCGGAGTATATTTCTGTAGTAGCAACTATTTGGTTGTATGTGGTAAAGAATCAGATCATGCCAACAGAGAATGATCAGCACATCATTTGTGATTGGGTGCTATTAATTTATACCATGATTAAGGGTTCTCAATTACTTTTGGGAGACTTATTG

Coding sequence (CDS)

TCCACATGGGACATCTCACCGATGGGATTCCATATGCTCAGATCGGAGTATATTTCTGTAGTAGCAACTATTTGGTTGTATGTGGTAAAGAATCAGATCATGCCAACAGAGAATGATCAGCACATCATTTGTGATTGGGTGCTATTAATTTATACCATGATTAAGGGTTCTCAATTACTTTTGGGAGACTTATTG

Protein sequence

STWDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIKGSQLLLGDLL
Homology
BLAST of MC07g0358 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 3.98e-07
Identity = 25/64 (39.06%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 2    TWDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIKGSQLLL 61
            TW IS MG   L+   I+  AT+W+YVVKN+++PT  D  I  +  +++Y ++KG +   
Sbjct: 1212 TWTISTMGKLSLKPLDINEQATVWMYVVKNRLIPTSYDSSIKRNRAMIVYILVKGVEFNF 1271

Query: 62   GDLL 65
            G+L+
Sbjct: 1272 GELI 1275

BLAST of MC07g0358 vs. NCBI nr
Match: TYG52543.1 (hypothetical protein ES288_D09G036700v1 [Gossypium darwinii])

HSP 1 Score: 49.7 bits (117), Expect = 6.75e-05
Identity = 20/65 (30.77%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 1   STWDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIKGSQLL 60
           S W I   G H  + EY+  VA +W Y V+   MP  +   I  +W+LL+Y ++    + 
Sbjct: 120 SQWIIRNYGSHSCQREYLKPVAKVWFYFVRYSFMPISHSSTISMEWMLLLYAILTEKSIN 179

Query: 61  LGDLL 65
           +G ++
Sbjct: 180 VGKII 184

BLAST of MC07g0358 vs. NCBI nr
Match: KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 3.01e-04
Identity = 20/53 (37.74%), Postives = 32/53 (60.38%), Query Frame = 0

Query: 3   WDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIK 55
           WDI P G + L  + ++  A IWL  VKN I PT +D  I  + ++L+Y +++
Sbjct: 52  WDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIME 104

BLAST of MC07g0358 vs. NCBI nr
Match: KAG4141194.1 (hypothetical protein ERO13_D06G060950v2 [Gossypium hirsutum])

HSP 1 Score: 47.8 bits (112), Expect = 3.34e-04
Identity = 22/62 (35.48%), Postives = 32/62 (51.61%), Query Frame = 0

Query: 1   STWDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIKGSQLL 60
           S W I   G H  R EY+  VA +WLY V    MPT +   I  + +LL+Y ++    + 
Sbjct: 147 SQWIIRKYGSHSCRREYLKPVANVWLYFVCYSFMPTSHSSTISMERMLLLYAILTEKSIN 206

Query: 61  LG 62
           +G
Sbjct: 207 VG 208

BLAST of MC07g0358 vs. NCBI nr
Match: KAE8650696.1 (hypothetical protein Csa_023718, partial [Cucumis sativus])

HSP 1 Score: 45.8 bits (107), Expect = 3.44e-04
Identity = 19/57 (33.33%), Postives = 32/57 (56.14%), Query Frame = 0

Query: 3  WDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVL-LIYTMIKGSQ 58
          W+++PMG   L    +++ A +WL+ +K +I+PT  D  I  D+ +   Y M K  Q
Sbjct: 12 WEVAPMGRFQLYPHQLTIEANVWLFFIKKKIVPTRYDSTISVDYAMNFYYIMTKKRQ 68

BLAST of MC07g0358 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.93e-07
Identity = 25/64 (39.06%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 2    TWDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIKGSQLLL 61
            TW IS MG   L+   I+  AT+W+YVVKN+++PT  D  I  +  +++Y ++KG +   
Sbjct: 1212 TWTISTMGKLSLKPLDINEQATVWMYVVKNRLIPTSYDSSIKRNRAMIVYILVKGVEFNF 1271

Query: 62   GDLL 65
            G+L+
Sbjct: 1272 GELI 1275

BLAST of MC07g0358 vs. ExPASy TrEMBL
Match: A0A5D2B8V0 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.27e-05
Identity = 20/65 (30.77%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 1   STWDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIKGSQLL 60
           S W I   G H  + EY+  VA +W Y V+   MP  +   I  +W+LL+Y ++    + 
Sbjct: 120 SQWIIRNYGSHSCQREYLKPVAKVWFYFVRYSFMPISHSSTISMEWMLLLYAILTEKSIN 179

Query: 61  LGDLL 65
           +G ++
Sbjct: 180 VGKII 184

BLAST of MC07g0358 vs. ExPASy TrEMBL
Match: A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.46e-04
Identity = 20/53 (37.74%), Postives = 32/53 (60.38%), Query Frame = 0

Query: 3   WDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIK 55
           WDI P G + L  + ++  A IWL  VKN I PT +D  I  + ++L+Y +++
Sbjct: 52  WDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIME 104

BLAST of MC07g0358 vs. ExPASy TrEMBL
Match: A0A5D2FHZ7 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A08G093000v1 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.78e-04
Identity = 19/65 (29.23%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 1   STWDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIKGSQLL 60
           S W I   G H  R EY+  +A +W Y V+   MP  +   I  + +LL+Y +++   + 
Sbjct: 145 SQWIIRKYGSHSCRREYLKSIAKVWFYFVRYSFMPISHSSTISMERMLLLYAILREKYIN 204

Query: 61  LGDLL 65
           +G+++
Sbjct: 205 VGEII 209

BLAST of MC07g0358 vs. ExPASy TrEMBL
Match: A0A5D1ZYC3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D13G120000v1 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.32e-04
Identity = 20/65 (30.77%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 1   STWDISPMGFHMLRSEYISVVATIWLYVVKNQIMPTENDQHIICDWVLLIYTMIKGSQLL 60
           S W +   G H  R EY+  VA +W Y V+   MP  +   I  + +LL+YT++    + 
Sbjct: 147 SQWIVRKYGSHSCRREYLKPVAKVWFYFVRYNFMPILHSSTISMEQMLLLYTILTEKSIN 206

Query: 61  LGDLL 65
           +G ++
Sbjct: 207 IGKII 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022154847.13.98e-0739.06LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia][more]
TYG52543.16.75e-0530.77hypothetical protein ES288_D09G036700v1 [Gossypium darwinii][more]
KAA0057652.13.01e-0437.74hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19... [more]
KAG4141194.13.34e-0435.48hypothetical protein ERO13_D06G060950v2 [Gossypium hirsutum][more]
KAE8650696.13.44e-0433.33hypothetical protein Csa_023718, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1DMT31.93e-0739.06LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia... [more]
A0A5D2B8V03.27e-0530.77Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=... [more]
A0A5D3D7L31.46e-0437.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D2FHZ71.78e-0429.23Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A08G093000v1 PE=... [more]
A0A5D1ZYC32.32e-0430.77Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D13G120000v1 PE=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0358.1MC07g0358.1mRNA