MC07g0280 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0280
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAMP-binding domain-containing protein
LocationMC07: 9704106 .. 9704240 (-)
RNA-Seq ExpressionMC07g0280
SyntenyMC07g0280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCAACCTTCACATCTTGTCTCAGCATTGGACTGGTTATTGGCAAGAATGGCTGCTTCAATATCGTGGCTAATTCATATGCTGGGAAAGAAATTAATCTATAGTAAAGTTCAGTCTGCAATTGGGATATGGAAG

mRNA sequence

GTTCAACCTTCACATCTTGTCTCAGCATTGGACTGGTTATTGGCAAGAATGGCTGCTTCAATATCGTGGCTAATTCATATGCTGGGAAAGAAATTAATCTATAGTAAAGTTCAGTCTGCAATTGGGATATGGAAG

Coding sequence (CDS)

GTTCAACCTTCACATCTTGTCTCAGCATTGGACTGGTTATTGGCAAGAATGGCTGCTTCAATATCGTGGCTAATTCATATGCTGGGAAAGAAATTAATCTATAGTAAAGTTCAGTCTGCAATTGGGATATGGAAG

Protein sequence

VQPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK
Homology
BLAST of MC07g0280 vs. ExPASy Swiss-Prot
Match: Q8W471 (Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AAE15 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.2e-06
Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 0

Query: 3   PSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 46
           P ++V+ +DWL AR+ A++ W +HML KKLIY K+ S+IGI K
Sbjct: 426 PMYIVAFVDWLWARVIAALLWPLHMLAKKLIYKKIHSSIGISK 468

BLAST of MC07g0280 vs. ExPASy Swiss-Prot
Match: Q9LK39 (Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AAE16 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.3e-05
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 3   PSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 46
           P ++VS +DWL AR+ A   W +HML +KL++ K++S+IGI K
Sbjct: 410 PMYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIRSSIGITK 452

BLAST of MC07g0280 vs. NCBI nr
Match: XP_022147167.1 (probable acyl-activating enzyme 16, chloroplastic [Momordica charantia])

HSP 1 Score: 80.1 bits (196), Expect = 6.42e-16
Identity = 40/45 (88.89%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   VQPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           VQPSHL SALDWLLARM ASI W IHML KKLIYSKVQSAIGIWK
Sbjct: 419 VQPSHLASALDWLLARMTASILWPIHMLAKKLIYSKVQSAIGIWK 463

BLAST of MC07g0280 vs. NCBI nr
Match: XP_038874366.1 (probable acyl-activating enzyme 16, chloroplastic [Benincasa hispida])

HSP 1 Score: 79.0 bits (193), Expect = 1.64e-15
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 1   VQPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           VQP+HLVSALDWL ARMAA+I W IHML KKL+YSKVQSAIGIWK
Sbjct: 418 VQPTHLVSALDWLFARMAAAILWPIHMLAKKLVYSKVQSAIGIWK 462

BLAST of MC07g0280 vs. NCBI nr
Match: XP_023548745.1 (probable acyl-activating enzyme 16, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.0 bits (188), Expect = 7.78e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   VQPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           VQPSH+VSALDWL AR AA+I W IHML KKL+YSKVQSAIGIWK
Sbjct: 421 VQPSHIVSALDWLFARTAAAILWPIHMLAKKLVYSKVQSAIGIWK 465

BLAST of MC07g0280 vs. NCBI nr
Match: XP_023548746.1 (probable acyl-activating enzyme 16, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.0 bits (188), Expect = 7.78e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   VQPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           VQPSH+VSALDWL AR AA+I W IHML KKL+YSKVQSAIGIWK
Sbjct: 370 VQPSHIVSALDWLFARTAAAILWPIHMLAKKLVYSKVQSAIGIWK 414

BLAST of MC07g0280 vs. NCBI nr
Match: XP_023548747.1 (probable acyl-activating enzyme 16, chloroplastic isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.0 bits (188), Expect = 7.78e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   VQPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           VQPSH+VSALDWL AR AA+I W IHML KKL+YSKVQSAIGIWK
Sbjct: 300 VQPSHIVSALDWLFARTAAAILWPIHMLAKKLVYSKVQSAIGIWK 344

BLAST of MC07g0280 vs. ExPASy TrEMBL
Match: A0A6J1D1M2 (probable acyl-activating enzyme 16, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016178 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.11e-16
Identity = 40/45 (88.89%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   VQPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           VQPSHL SALDWLLARM ASI W IHML KKLIYSKVQSAIGIWK
Sbjct: 419 VQPSHLASALDWLLARMTASILWPIHMLAKKLIYSKVQSAIGIWK 463

BLAST of MC07g0280 vs. ExPASy TrEMBL
Match: A0A0A0KA45 (AMP-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G007970 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.45e-14
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0

Query: 1   VQPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           VQP+HLVSALDWL ARM ASI W IHML K ++YSKVQSAIGIWK
Sbjct: 418 VQPTHLVSALDWLFARMTASILWPIHMLAKIIVYSKVQSAIGIWK 462

BLAST of MC07g0280 vs. ExPASy TrEMBL
Match: A0A6J1H4D5 (probable acyl-activating enzyme 16, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460048 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.34e-14
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 2   QPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           QPSH+VSALDWL AR AA+I W IHML KK++YSKVQSA+GIWK
Sbjct: 422 QPSHIVSALDWLFARTAAAILWPIHMLAKKIVYSKVQSAVGIWK 465

BLAST of MC07g0280 vs. ExPASy TrEMBL
Match: A0A6J1H6F8 (probable acyl-activating enzyme 16, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460048 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.35e-14
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 2   QPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           QPSH+VSALDWL AR AA+I W IHML KK++YSKVQSA+GIWK
Sbjct: 371 QPSHIVSALDWLFARTAAAILWPIHMLAKKIVYSKVQSAVGIWK 414

BLAST of MC07g0280 vs. ExPASy TrEMBL
Match: A0A6J1KW26 (probable acyl-activating enzyme 16, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499223 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.17e-13
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0

Query: 2   QPSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 45
           QP H VSALDWL AR AA+I W IHML KKL+YSKVQSAIGIWK
Sbjct: 422 QPPHFVSALDWLFARTAAAILWPIHMLAKKLVYSKVQSAIGIWK 465

BLAST of MC07g0280 vs. TAIR 10
Match: AT4G14070.1 (acyl-activating enzyme 15 )

HSP 1 Score: 52.8 bits (125), Expect = 8.6e-08
Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 0

Query: 3   PSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 46
           P ++V+ +DWL AR+ A++ W +HML KKLIY K+ S+IGI K
Sbjct: 426 PMYIVAFVDWLWARVIAALLWPLHMLAKKLIYKKIHSSIGISK 468

BLAST of MC07g0280 vs. TAIR 10
Match: AT3G23790.1 (AMP-dependent synthetase and ligase family protein )

HSP 1 Score: 49.3 bits (116), Expect = 9.5e-07
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 3   PSHLVSALDWLLARMAASISWLIHMLGKKLIYSKVQSAIGIWK 46
           P ++VS +DWL AR+ A   W +HML +KL++ K++S+IGI K
Sbjct: 410 PMYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIRSSIGITK 452

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8W4711.2e-0653.49Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic OS=Ara... [more]
Q9LK391.3e-0548.84Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Match NameE-valueIdentityDescription
XP_022147167.16.42e-1688.89probable acyl-activating enzyme 16, chloroplastic [Momordica charantia][more]
XP_038874366.11.64e-1584.44probable acyl-activating enzyme 16, chloroplastic [Benincasa hispida][more]
XP_023548745.17.78e-1582.22probable acyl-activating enzyme 16, chloroplastic isoform X1 [Cucurbita pepo sub... [more]
XP_023548746.17.78e-1582.22probable acyl-activating enzyme 16, chloroplastic isoform X2 [Cucurbita pepo sub... [more]
XP_023548747.17.78e-1582.22probable acyl-activating enzyme 16, chloroplastic isoform X3 [Cucurbita pepo sub... [more]
Match NameE-valueIdentityDescription
A0A6J1D1M23.11e-1688.89probable acyl-activating enzyme 16, chloroplastic OS=Momordica charantia OX=3673... [more]
A0A0A0KA452.45e-1480.00AMP-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G007970... [more]
A0A6J1H4D53.34e-1477.27probable acyl-activating enzyme 16, chloroplastic isoform X1 OS=Cucurbita moscha... [more]
A0A6J1H6F83.35e-1477.27probable acyl-activating enzyme 16, chloroplastic isoform X2 OS=Cucurbita moscha... [more]
A0A6J1KW261.17e-1379.55probable acyl-activating enzyme 16, chloroplastic isoform X1 OS=Cucurbita maxima... [more]
Match NameE-valueIdentityDescription
AT4G14070.18.6e-0853.49acyl-activating enzyme 15 [more]
AT3G23790.19.5e-0748.84AMP-dependent synthetase and ligase family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0280.1MC07g0280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm